PRD_002516

cyclic peptide inhibitor 1

Created: 2022-11-09
Last modified:  2023-03-22

PRD_002516 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 8F31.

Chemical Details

Formal Charge0
Atom Count297
Chiral Atom Count17
Bond Count307
Aromatic Bond Count55
Toggle HydrogenToggle Labels

Chemical Component Summary

Namecyclic peptide inhibitor 1
Systematic Name (OpenEye OEToolkits)(3~{R},6~{S},9~{S},12~{S},15~{S},18~{S},21~{S},24~{S},27~{S},30~{S},33~{S},36~{S},39~{S},45~{S},48~{S},51~{R})-39-(2-azanyl-2-oxidanylidene-ethyl)-18-(3-azanyl-3-oxidanylidene-propyl)-9-(hydroxymethyl)-12-(2-hydroxy-2-oxoethyl)-21-(3-hydroxy-3-oxopropyl)-24,27,51-tris[(4-hydroxyphenyl)methyl]-33-(1~{H}-imidazol-3-ium-4-ylmethyl)-30,45-bis(1~{H}-indol-3-ylmethyl)-36-(2-methylpropyl)-6-[(1~{R})-1-oxidanylethyl]-5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53-heptadecakis(oxidanylidene)-15,48-bis(phenylmethyl)-1-thia-4,7,10,13,16,19,22,25,28,31,34,37,40,43,46,49,52-heptadecazacyclotetrapentacontane-3-carboxylic acid
FormulaC111 H132 N23 O30 S
Molecular Weight2,300.437
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgram Version Descriptor
SMILESCACTVS3.385CC(C)C[CH]1NC(=O)[CH](CC(N)=O)NC(=O)CNC(=O)[CH](Cc2c[nH]c3ccccc23)NC(=O)[CH](Cc4ccccc4)NC(=O)[CH](Cc5ccc(O)cc5)NC(=O)CSC[CH](NC(=O)[CH](NC(=O)[CH](CO)NC(=O)[CH](CC(O)=O)NC(=O)[CH](Cc6ccccc6)NC(=O)[CH](CCC(N)=O)NC(=O)[CH](CCC(O)=O)NC(=O)[CH](Cc7ccc(O)cc7)NC(=O)[CH](Cc8ccc(O)cc8)NC(=O)[CH](Cc9c[nH]c%10ccccc9%10)NC(=O)[CH](Cc%11c[nH]c[nH+]%11)NC1=O)[CH](C)O)C(O)=O
SMILESOpenEye OEToolkits2.0.7CC(C)CC1C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(CSCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)N1)CC(=O)N)Cc2c[nH]c3c2cccc3)Cc4ccccc4)Cc5ccc(cc5)O)C(=O)O)C(C)O)CO)CC(=O)O)Cc6ccccc6)CCC(=O)N)CCC(=O)O)Cc7ccc(cc7)O)Cc8ccc(cc8)O)Cc9c[nH]c1c9cccc1)Cc1c[nH]c[nH+]1
Canonical SMILESCACTVS3.385 CC(C)C[C@@H]1NC(=O)[C@H](CC(N)=O)NC(=O)CNC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc4ccccc4)NC(=O)[C@@H](Cc5ccc(O)cc5)NC(=O)CSC[C@H](NC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](Cc6ccccc6)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](Cc7ccc(O)cc7)NC(=O)[C@H](Cc8ccc(O)cc8)NC(=O)[C@H](Cc9c[nH]c%10ccccc9%10)NC(=O)[C@H](Cc%11c[nH]c[nH+]%11)NC1=O)[C@@H](C)O)C(O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 C[C@H]([C@H]1C(=O)N[C@@H](CSCC(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)CO)CC(=O)O)Cc2ccccc2)CCC(=O)N)CCC(=O)O)Cc3ccc(cc3)O)Cc4ccc(cc4)O)Cc5c[nH]c6c5cccc6)Cc7c[nH]c[nH+]7)CC(C)C)CC(=O)N)Cc8c[nH]c9c8cccc9)Cc1ccccc1)Cc1ccc(cc1)O)C(=O)O)O
InChIInChI1.06 InChI=1S/C111H131N23O30S/c1-57(2)38-76-99(151)130-84(46-66-51-114-56-118-66)106(158)129-83(45-65-50-116-73-21-13-11-19-71(65)73)105(157)127-81(43-63-26-32-69(139)33-27-63)102(154)126-80(42-62-24-30-68(138)31-25-62)101(153)122-75(35-37-93(144)145)97(149)121-74(34-36-89(112)140)98(150)124-78(39-59-14-6-4-7-15-59)104(156)131-86(48-94(146)147)108(160)132-87(53-135)109(161)134-95(58(3)136)110(162)133-88(111(163)164)54-165-55-92(143)120-77(41-61-22-28-67(137)29-23-61)100(152)125-79(40-60-16-8-5-9-17-60)103(155)128-82(44-64-49-115-72-20-12-10-18-70(64)72)96(148)117-52-91(142)119-85(47-90(113)141)107(159)123-76/h4-33,49-51,56-58,74-88,95,115-116,135-139H,34-48,52-55H2,1-3H3,(H2,112,140)(H2,113,141)(H,114,118)(H,117,148)(H,119,142)(H,120,143)(H,121,149)(H,122,153)(H,123,159)(H,124,150)(H,125,152)(H,126,154)(H,127,157)(H,128,155)(H,129,158)(H,130,151)(H,131,156)(H,132,160)(H,133,162)(H,134,161)(H,144,145)(H,146,147)(H,163,164)/p+1/t58-,74+,75+,76+,77-,78+,79+,80+,81+,82+,83+,84+,85+,86+,87+,88+,95+/m1/s1
InChIKeyInChI1.06 VKDWYSICSHFUSA-OWOSNWKNSA-O