PRD_900094

HEPARIN DISACCHARIDE III-S

Created:	2020-05-08
Last modified:	2020-07-29

PRD_900094 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1U4M.

Find Related PDB Entries
1 entry where PRD_900094 is present

Chemical Details
Formal Charge	0
Atom Count	47
Chiral Atom Count	8
Bond Count	48
Aromatic Bond Count	0

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Chemical Component Summary
Name	HEPARIN DISACCHARIDE III-S
Systematic Name (OpenEye OEToolkits)	(4S,5R,6R)-6-[(2R,3S,4R,5R,6S)-4,6-dihydroxy-2-(hydroxymethyl)-5-(sulfonatoamino)oxan-3-yl]oxy-4-hydroxy-5-sulfonatooxy -5,6-dihydro-4H-pyran-2-carboxylate
Formula	C₁₂ H₁₆ N O₁₆ S₂
Molecular Weight	494.383
Type	SACCHARIDE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	[O-]S(=O)(=O)OC2C(O)C=C(OC2OC1C(OC(O)C(NS([O-])(=O)=O)C1O)CO)C([O-])=O
SMILES	CACTVS	3.341	OC[CH]1O[CH](O)[CH](N[S]([O-])(=O)=O)[CH](O)[CH]1O[CH]2OC(=C[CH](O)[CH]2O[S]([O-])(=O)=O)C([O-])=O
SMILES	OpenEye OEToolkits	1.5.0	C1=C(OC(C(C1O)OS(=O)(=O)[O-])OC2C(OC(C(C2O)NS(=O)(=O)[O-])O)CO)C(=O)[O-]
Canonical SMILES	CACTVS	3.341	OC[C@H]1O[C@H](O)[C@H](N[S]([O-])(=O)=O)[C@@H](O)[C@@H]1O[C@@H]2OC(=C[C@H](O)[C@H]2O[S]([O-])(=O)=O)C([O-])=O
Canonical SMILES	OpenEye OEToolkits	1.5.0	C1=C(O[C@H]([C@@H]([C@H]1O)OS(=O)(=O)[O-])O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)NS(=O)(=O)[O-])O)CO)C(=O)[O-]
InChI	InChI	1.03	InChI=1S/C12H19NO16S2/c14-2-5-9(7(16)6(11(19)26-5)13-30(20,21)22)28-12-8(29-31(23,24)25)3(15)1-4(27-12)10(17)18/h1,3,5- 9,11-16,19H,2H2,(H,17,18)(H,20,21,22)(H,23,24,25)/p-3/t3-,5+,6+,7+,8+,9+,11-,12-/m0/s1
InChIKey	InChI	1.03	GSYQGRODWXMUOO-GYBHJADLSA-K

Drug Info: DrugBank

DrugBank ID	DB02353
Name	Heparin Disaccharide Iii-S
Groups	experimental
Synonyms	Heparin Disaccharide Iii-S

Drug Targets

Name	Target Sequence	Pharmacological Action	Actions
C-C motif chemokine 5	MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEY...	unknown

Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682