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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Dowiercial, A."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Mus musculus (6)
	Caenorhabditis elegans (4)
	Trichinella spiralis (2)

Taxonomy

Eukaryota (12)

Experimental Method

X-RAY DIFFRACTION (12)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (6)
	2.0 - 2.5 (1)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (8)
	2015 - 2019 (4)

Enzyme Classification Name

Transferases (12)

Symmetry Type

	Cyclic (12)
	Dihedral (1)

SCOP Classification

Alpha and beta proteins (a+b) (12)

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1 to 12 of 12 Structures

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3IHI \| pdb_00003ihi	Download File View File

Crystal structure of mouse thymidylate synthase

Dowiercial, A., Jarmula, A., Rypniewski, W.R., Sokolowska, M., Fraczyk, T., Ciesla, J., Rode, W.

(2016) Struct Chem

Released	2010-02-02
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

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4E5O \| pdb_00004e5o	Download File View File

Crystal structure of mouse thymidylate synthase in complex with dUMP

Dowiercial, A., Jarmula, A., Rypniewski, W., Sokolowska, M., Fraczyk, T., Ciesla, J., Rode, W.

(2016) Struct Chem

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	BU1, UMP

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4EB4 \| pdb_00004eb4	Download File View File

Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex

Dowiercial, A., Jarmula, A., Rypniewski, W.R., Wilk, P., Rode, W.

(2014) Biomed Res Int 2014: 945803

Released	2012-05-02
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	D16, DTT, GOL, MES, SO4, UMP

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4EIN \| pdb_00004ein	Download File View File

Crystal structure of mouse thymidylate synthase in binary complex with a substrate analogue and strong inhibitor, N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate

Dowiercial, A., Jarmula, A., Rypniewski, W.R., Wilk, P., Kierdaszuk, B., Rode, W.

(2013) Pteridines

Released	2013-04-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	GOL, NOH

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4EZ8 \| pdb_00004ez8	Download File View File

Crystal structure of mouse thymidylate sythase in ternary complex with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate and the cofactor product, dihydrofolate

Dowiercial, A., Jarmula, A., Rypniewski, W., Wilk, P., Kierdaszuk, B., Banaszak, K., Gorecka, K., Rode, W.

(2013) Pteridines

Released	2013-05-08
Method	X-RAY DIFFRACTION 1.17 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	DHF, GOL, NOH

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4IQB \| pdb_00004iqb	Download File View File

High Resolution Crystal Structure of C.elegans Thymidylate Synthase

Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.

(2017) J Mol Graph Model 77: 33-50

Released	2014-01-22
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	Caenorhabditis elegans
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	SO4

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4IRR \| pdb_00004irr	Download File View File

Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP

Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.

To be published

Released	2014-01-29
Method	X-RAY DIFFRACTION 2.48 Å
Organisms	Caenorhabditis elegans
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	DTT, UMP

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4ISW \| pdb_00004isw	Download File View File

Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP

Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.

(2013) Bioorg Chem 52C: 44-49

Released	2013-12-11
Method	X-RAY DIFFRACTION 3.14 Å
Organisms	Caenorhabditis elegans
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	UMP

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5BY6 \| pdb_00005by6	Download File View File

Crystal structure of Trichinella spiralis thymidylate synthase complexed with dUMP

Dowiercial, A., Jarmula, A., Rypniewski, W., Fraczyk, T., Wilk, P., Rode, W.

(2017) J Mol Graph Model 77: 33-50

Released	2015-06-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trichinella spiralis
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	DTT, GOL, UMP

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5FCT \| pdb_00005fct	Download File View File

Mouse thymidylate synthase in ternary complex with FdUMP and methylenetetrahydrofolate.

Dowiercial, A., Wilk, P., Jarmula, A., Rode, W.

(2016) Struct Chem

Released	2016-10-26
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mus musculus
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	C2F, UFP

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5M4Z \| pdb_00005m4z	Download File View File

Crystal structure of the complex of T.spiralis thymidylate synthase with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate, crystallized in the presence of N(5,10)-methylenetetrahydrofolate

Wilk, P., Maj, P., Jarmula, A., Dowiercial, A., Rode, W.

(2021) Int J Mol Sci 22:

Released	2017-12-20
Method	X-RAY DIFFRACTION 1.179 Å
Organisms	Trichinella spiralis
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	7K8, GOL

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5NOO \| pdb_00005noo	Download File View File

Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex

Wilk, P., Jarmula, A., Maj, P., Dowiercial, A., Banaszak, K., Rypniewski, W., Rode, W.

(2017) J Mol Graph Model 77: 33-50

Released	2017-05-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Caenorhabditis elegans
Macromolecule	Thymidylate synthase (protein)
Unique Ligands	D16, UMP

1 to 12 of 12 Structures

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3IHI | pdb_00003ihi

Crystal structure of mouse thymidylate synthase

4E5O | pdb_00004e5o

Crystal structure of mouse thymidylate synthase in complex with dUMP

4EB4 | pdb_00004eb4

Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex

4EIN | pdb_00004ein

Crystal structure of mouse thymidylate synthase in binary complex with a substrate analogue and strong inhibitor, N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate

4EZ8 | pdb_00004ez8

Crystal structure of mouse thymidylate sythase in ternary complex with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate and the cofactor product, dihydrofolate

4IQB | pdb_00004iqb

High Resolution Crystal Structure of C.elegans Thymidylate Synthase

4IRR | pdb_00004irr

Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP

4ISW | pdb_00004isw

Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP

5BY6 | pdb_00005by6

Crystal structure of Trichinella spiralis thymidylate synthase complexed with dUMP

5FCT | pdb_00005fct

Mouse thymidylate synthase in ternary complex with FdUMP and methylenetetrahydrofolate.

5M4Z | pdb_00005m4z

Crystal structure of the complex of T.spiralis thymidylate synthase with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate, crystallized in the presence of N(5,10)-methylenetetrahydrofolate

5NOO | pdb_00005noo

Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3IHI | pdb_00003ihi

4E5O | pdb_00004e5o

4EB4 | pdb_00004eb4

4EIN | pdb_00004ein

4EZ8 | pdb_00004ez8

4IQB | pdb_00004iqb

4IRR | pdb_00004irr

4ISW | pdb_00004isw

5BY6 | pdb_00005by6

5FCT | pdb_00005fct

5M4Z | pdb_00005m4z

5NOO | pdb_00005noo