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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Falini, G."

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Search Summary

This query matches 39 Structures.

Refinements

Structure Determination Methodology

experimental (39)

Scientific Name of Source Organism

	Homo sapiens (14)
	Arabidopsis thaliana (9)
	Chlamydomonas reinhardtii (7)
	Spinacia oleracea (6)
	Bougainvillea spectabilis (1)
	Dianthus caryophyllus (1)
	Silene chalcedonica (1)

Taxonomy

Eukaryota (39)

Experimental Method

X-RAY DIFFRACTION (39)

Polymer Entity Type

Protein (39)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (18)
	2.0 - 2.5 (9)
	2.5 - 3.0 (6)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (7)
	2010 - 2014 (8)
	2015 - 2019 (11)
	2020 - 2024 (8)

Enzyme Classification Name

	Oxidoreductases (20)
	Ligases (4)
	Hydrolases (3)
	Transferases (2)

Symmetry Type

	Asymmetric (19)
	Dihedral (13)
	Cyclic (10)

SCOP Classification

	Alpha and beta proteins (a+b) (23)
	Alpha and beta proteins (a/b) (6)
	Artifacts (2)

AllSelected

1 to 25 of 39 Structures

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1NBO	Download File View File

The dual coenzyme specificity of photosynthetic glyceraldehyde-3-phosphate dehydrogenase interpreted by the crystal structure of A4 isoform complexed with NAD

Falini, G., Fermani, S., Ripamonti, A., Sabatino, P., Sparla, F., Pupillo, P., Trost, P.

(2003) Biochemistry 42: 4631-4639

Released	2003-05-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Spinacia oleracea
Macromolecule	glyceraldehyde-3-phosphate dehydrogenase A (protein)
Unique Ligands	NAD, SO4

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1RL0	Download File View File

Crystal structure of a new ribosome-inactivating protein (RIP): dianthin 30

Fermani, S., Falini, G., Ripamonti, A., Bolognesi, A., Polito, L., Stirpe, F.

(2005) J Struct Biol 149: 204-212

Released	2004-12-07
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Dianthus caryophyllus
Macromolecule	Antiviral protein DAP-30 (protein)

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1RM3	Download File View File

Crystal structure of mutant T33A of photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform, complexed with NADP

Sparla, F., Fermani, S., Falini, G., Ripamonti, A., Sabatino, P., Pupillo, P., Trost, P.

(2004) J Mol Biol 340: 1025-1037

Released	2004-07-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Spinacia oleracea
Macromolecule	Glyceraldehyde 3-phosphate dehydrogenase A (protein)
Unique Ligands	NDP, SO4

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1RM4	Download File View File

Crystal structure of recombinant photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform, complexed with NADP

Sparla, F., Fermani, S., Falini, G., Ripamonti, A., Sabatino, P., Pupillo, P., Trost, P.

(2004) J Mol Biol 340: 1025-1037

Released	2004-07-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Spinacia oleracea
Macromolecule	Glyceraldehyde 3-phosphate dehydrogenase A (protein)
Unique Ligands	NDP, SO4

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1RM5	Download File View File

Crystal structure of mutant S188A of photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform, complexed with NADP

Sparla, F., Fermani, S., Falini, G., Ripamonti, A., Sabatino, P., Pupillo, P., Trost, P.

(2004) J Mol Biol 340: 1025-1037

Released	2004-07-27
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Spinacia oleracea
Macromolecule	Glyceraldehyde 3-phosphate dehydrogenase A (protein)
Unique Ligands	NDP, SO4

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2G5X	Download File View File

Crystal structure of lychnin a type 1 Ribosome Inactivating Protein (RIP)

Fermani, S., Falini, G., Tosi, G., Ripamonti, A., Polito, L., Bolognesi, A., Stirpe, F.

To be published

Released	2007-03-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Silene chalcedonica
Macromolecule	Ribosome-inactivating protein (protein)

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2PKQ	Download File View File

Crystal structure of the photosynthetic A2B2-glyceraldehyde-3-phosphate dehydrogenase, complexed with NADP

Fermani, S., Falini, G., Ripamonti, A.

(2007) Proc Natl Acad Sci U S A 104: 11109-11114

Released	2007-06-19
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Spinacia oleracea
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase A (protein) Glyceraldehyde-3-phosphate dehydrogenase B (protein)
Unique Ligands	NDP, SO4

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2PKR	Download File View File

Crystal structure of (A+CTE)4 chimeric form of photosyntetic glyceraldehyde-3-phosphate dehydrogenase, complexed with NADP

Fermani, S., Falini, G., Ripamonti, A.

(2007) Proc Natl Acad Sci U S A 104: 11109-11114

Released	2007-06-19
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Spinacia oleracea
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase Aor (protein)
Unique Ligands	NDP, SO4

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3CTK	Download File View File

Crystal structure of the type 1 RIP bouganin

Fermani, S., Tosi, G., Falini, G., Ripamonti, A., Farini, V., Bolognesi, A., Polito, L.

(2009) J Struct Biol 168: 278-287

Released	2008-05-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bougainvillea spectabilis
Macromolecule	rRNA N-glycosidase (protein)

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3EEC	Download File View File

X-ray structure of human ubiquitin Cd(II) adduct

Falini, G., Fermani, S., Tosi, G., Arnesano, F., Natile, G.

(2008) Chem Commun (Camb) 45: 5960-5962

Released	2009-03-10
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	CD

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3EFU	Download File View File

X-ray structure of human ubiquitin-Hg(II) adduct

Falini, G., Fermani, S., Tosi, G.

(2008) Chem Commun (Camb) 45: 5960-5962

Released	2008-12-09
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	HG

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3EHV	Download File View File

X-ray structure of human ubiquitin Zn(II) adduct

Falini, G., Fermani, S., Tosi, G.

(2008) Chem Commun (Camb) 45: 5960-5962

Released	2009-03-17
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	ZN

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3K2B	Download File View File

Crystal structure of photosynthetic A4 isoform glyceraldehyde-3-phosphate dehydrogenase complexed with NAD, from Arabidopsis thaliana

Fermani, S., Falini, G., Thumiger, A., Sparla, F., Marri, L., Trost, P.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 621-626

Released	2010-06-09
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (protein)
Unique Ligands	NAD, SO4

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3N30	Download File View File

Crystal Structure of cubic Zn3-hUb (human ubiquitin) adduct

Siliqi, D., Caliandro, R., Arnesano, F., Natile, G., Falini, G., Fermani, S., Belviso, B.D.

(2011) Chemistry 17: 1569-1578

Released	2011-01-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	ZN

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3N32	Download File View File

The crystal structure of human Ubiquitin adduct with Zeise's salt

Siliqi, D., Caliandro, R., Falini, G., Fermani, S., Natile, G., Arnesano, F., Belviso, B.D.

(2011) Chemistry 17: 1569-1578

Released	2011-01-12
Method	X-RAY DIFFRACTION 1.795 Å
Organisms	Homo sapiens
Macromolecule	Ubiquitin (protein)
Unique Ligands	PT

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3QV1	Download File View File

Crystal structure of the binary complex of photosyntetic A4 glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with cp12-2, both from Arabidopsis thaliana.

Thumiger, A., Fermani, S., Falini, G., Marri, L., Sparla, F., Trost, P.

(2012) J Biol Chem 287: 21372-21383

Released	2012-02-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Arabidopsis thaliana
Macromolecule	CP12 protein (protein) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (protein)
Unique Ligands	EDO, NAD, PEG, SO4

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3RVD	Download File View File

Crystal structure of the binary complex, obtained by soaking, of photosyntetic a4 glyceraldehyde 3-phosphate dehydrogenase (gapdh) with cp12-2, both from arabidopsis thaliana.

Fermani, S., Thumiger, A., Falini, G., Marri, L., Sparla, F., Trost, P.

(2012) J Biol Chem 287: 21372-21383

Released	2012-04-25
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (protein) Photosyntetic glyceraldehyde-3-phosphate dehydrogenase (a4 isoform) (protein)
Unique Ligands	NAD, SO4

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4K7S	Download File View File

Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb

Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.

(2013) Chemistry 19: 15480-15484

Released	2013-05-08
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	ubiquitin (protein)
Unique Ligands	ACT, EDO, ZN

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4K7U	Download File View File

Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb

Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.

(2013) Chemistry 19: 15480-15484

Released	2013-05-08
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	ubiquitin (protein)
Unique Ligands	ACT, EDO, PEG, ZN

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4K7W	Download File View File

Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb

Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.

(2013) Chemistry 19: 15480-15484

Released	2013-05-08
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Homo sapiens
Macromolecule	ubiquitin (protein)
Unique Ligands	ACT, EDO, ZN

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4Z0H	Download File View File

X-ray structure of cytoplasmic glyceraldehyde-3-phosphate dehydrogenase (GapC1) complexed with NAD

Fermani, S., Zaffagnini, M., Orru, R., Falini, G., Trost, P.

(2016) Antioxid Redox Signal 24: 502-517

Released	2016-04-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic (protein)
Unique Ligands	NAD, SO4

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5NL4	Download File View File

Crystal structure of Zn1.3-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc acetate/1.3 mM E16V hUb

Fermani, S., Falini, G.

(2018) Chemistry 24: 4140-4148

Released	2017-04-26
Method	X-RAY DIFFRACTION 1.32 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-C (protein)
Unique Ligands	ACT, EDO, PEG, ZN

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5NL5	Download File View File

Crystal structure of Zn1.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 70 mM zinc acetate/1.3 mM E16V hUb

Fermani, S., Falini, G.

(2018) Chemistry 24: 4140-4148

Released	2017-04-26
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-B (protein)
Unique Ligands	ACT, EDO, ZN

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5NLF	Download File View File

Crystal structure of Zn2.7-E16V human ubiquitin (hUb) mutant adduct, from a solution 100 mM zinc acetate/1.3 mM E16V hUb

Fermani, S., Falini, G.

(2018) Chemistry 24: 4140-4148

Released	2017-05-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-C (protein)
Unique Ligands	ACT, ZN

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5NLI	Download File View File

Crystal structure of Zn2-E16V human ubiquitin (hUb) mutant adduct, from a solution 35 mM zinc acetate/10% v/v TFE/1.3 mM E16V hUb

Fermani, S., Falini, G.

(2018) Chemistry 24: 4140-4148

Released	2017-05-03
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Homo sapiens
Macromolecule	Polyubiquitin-C (protein)
Unique Ligands	ACT, EDO, ETF, ZN

1 to 25 of 39 Structures

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