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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Ferrer-Orta, C."

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Search Summary

This query matches 47 Structures.

Refinements

Structure Determination Methodology

experimental (47)

Scientific Name of Source Organism

	Foot and mouth disease virus C (12)
	Foot-and-mouth disease virus C-S8c1 (7)
	Rattus norvegicus (7)
	Foot-and-mouth disease virus (6)
	Foot-and-mouth disease virus (strain C1-Santa Pau) (5)
	synthetic construct (5)
	Mengo virus (4)
	Coxsackievirus B3 (2)
	Escherichia coli (2)
	Infectious bursal disease virus (2)

More...

Taxonomy

	Riboviria (37)
	Eukaryota (8)
	other sequences (5)
	Bacteria (2)
	Riboviria (RNA viruses and viroids) (2)

Experimental Method

X-RAY DIFFRACTION (47)

Polymer Entity Type

	Protein (47)
	RNA (18)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (8)
	2.0 - 2.5 (13)
	2.5 - 3.0 (20)
	3.0 - 3.5 (5)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (11)
	2010 - 2014 (14)
	2015 - 2019 (17)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (26)
	Hydrolases (5)

Symmetry Type

	Asymmetric (44)
	Cyclic (3)

SCOP Classification

	Multi-domain proteins (alpha and beta) (26)
	Artifacts (23)
	All beta proteins (6)
	Coiled coil proteins (1)
	Alpha and beta proteins (a/b) (3)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 47 Structures

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1KWM \| pdb_00001kwm	Download File View File

Human procarboxypeptidase B: Three-dimensional structure and implications for thrombin-activatable fibrinolysis inhibitor (TAFI)

Pereira, P.J.B., Segura-Martin, S., Ferrer-Orta, C., Vendrell, J., Aviles, F.-X., Coll, M., Gomis-Rueth, F.-X.

(2002) J Mol Biology 321: 537-547

Released	2002-06-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Procarboxypeptidase B (protein)
Unique Ligands	CIT, ZN

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1U09 \| pdb_00001u09	Download File View File

Footand Mouth Disease Virus RNA-dependent RNA polymerase

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2004) J Biological Chem 279: 47212-47221

Released	2004-08-31
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	polyprotein (protein)

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1WNE \| pdb_00001wne	Download File View File

Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2004) J Biological Chem 279: 47212-47221

Released	2004-08-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) 5'-R(CPAPUPGPGPGPCPC)-3' (nucleic acid) 5'-R(GPGPCPCP*C)-3' (nucleic acid)
Unique Ligands	MG

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2D7S \| pdb_00002d7s	Download File View File

Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with VPg protein

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2006) EMBO J 25: 880-888

Released	2006-03-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Foot and mouth disease virus C Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) VPg1 protein (protein)

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2E9R \| pdb_00002e9r	Download File View File

Foot-and-mouth disease virus RNA-dependent RNA polymerase in complex with a template-primer RNA and with ribavirin

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2007) Proc Natl Acad Sci U S A 104: 9463-9468

Released	2007-06-26
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) 5'-R(CPAPUPGPGPGPCPCPC)-3' (nucleic acid) 5'-R(CPCPCGPGPGPCPCPC)-3' (nucleic acid)
Unique Ligands	MG, RTP

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2E9T \| pdb_00002e9t	Download File View File

Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2007) Proc Natl Acad Sci U S A 104: 9463-9468

Released	2007-06-26
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) 5'-R(GPGPGPCPCPCP(5FU))-3' (nucleic acid) 5'-R(PUPAPGPGPGPCPCP*C)-3' (nucleic acid)
Unique Ligands	MG, PPV

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2E9Z \| pdb_00002e9z	Download File View File

Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2007) Proc Natl Acad Sci U S A 104: 9463-9468

Released	2007-06-26
Method	X-RAY DIFFRACTION 3 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) 5'-R(CPAPUPGPGPGPCPCPC)-3' (nucleic acid) 5'-R(GPGPGPCPCPCPA)-3' (nucleic acid)
Unique Ligands	MG, PPV, UTP

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2EC0 \| pdb_00002ec0	Download File View File

RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2007) Proc Natl Acad Sci U S A 104: 9463-9468

Released	2007-06-26
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Foot-and-mouth disease virus C-S8c1
Macromolecule	RNA-dependent RNA polymerase (protein) 5'-R(GPGPGPCPCPCPA)-3' (nucleic acid) 5'-R(PAPUPGPGPGPCPCP*C)-3' (nucleic acid)
Unique Ligands	MG, PPV

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2F8E \| pdb_00002f8e	Download File View File

Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with uridylylated VPg protein

Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.

(2006) EMBO J 25: 880-888

Released	2006-03-28
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Foot and mouth disease virus C Foot-and-mouth disease virus serotype Asia-1
Macromolecule	RNA-dependent RNA polymerase (protein) VPg protein (protein)
Unique Ligands	MG, MN, U5P

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2JB9 \| pdb_00002jb9	Download File View File

PhoB response regulator receiver domain constitutively-active double mutant D10A and D53E.

Ferrer-Orta, C., Arribas-Bosacoma, R., Kim, S.-K., Blanco, A.G., Pereira, P.J.B., Gomis-Ruth, F.X., Wanner, B.L., Coll, M., Sola, M.

(2007) J Mol Biology 366: 626

Released	2007-01-04
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB (protein)

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2JBA \| pdb_00002jba	Download File View File

PhoB response regulator receiver domain constitutively-active double mutant D53A and Y102C.

Arribas-Bosacoma, R., Ferrer-Orta, C., Kim, S.-K., Blanco, A.G., Pereira, P.J.B., Gomis-Ruth, F.X., Wanner, B.L., Coll, M., Sola, M.

(2007) J Mol Biology 366: 626

Released	2007-01-04
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli
Macromolecule	PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB (protein)
Unique Ligands	NA, TRS

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2R18 \| pdb_00002r18	Download File View File

Structural insights into the multifunctional protein VP3 of Birnaviruses

Casanas, A., Navarro, A., Ferrer-Orta, C., Gonzalez, D., Rodriguez, J.F., Verdaguer, N.

(2008) Structure 16: 29-37

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Infectious bursal disease virus
Macromolecule	Capsid assembly protein VP3 (protein)

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2Z7J \| pdb_00002z7j	Download File View File

Structural insights into de multifunctional VP3 protein of birnaviruses:gold derivative

Casanas, A., Navarro, A., Ferrer-Orta, C., Gonzalez, D., Rodriguez, J.F., Verdaguer, N.

(2008) Structure 16: 29-37

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Infectious bursal disease virus
Macromolecule	Capsid assembly protein VP3 (protein)
Unique Ligands	AU

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3GPE \| pdb_00003gpe	Download File View File

Crystal Structure Analysis of PKC (alpha)-C2 domain complexed with Ca2+ and PtdIns(4,5)P2

Ferrer-Orta, C., Querol-Audi, J., Fita, I., Verdaguer, N.

(2009) Proc Natl Acad Sci U S A 106: 6603-6607

Released	2009-05-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	Protein kinase C alpha type (protein)
Unique Ligands	CA, PO4, PT5

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3KLV \| pdb_00003klv	Download File View File

M296I G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA

Ferrer-Orta, C., Sierra, M., Agudo, R., Perez-Luque, R., Arias, A., Verdaguer, N.

(2010) J Virol 84: 6188-6199

Released	2010-07-07
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) RNA (5'-R(APUPGPGPGPCPC)-3') (nucleic acid) RNA (5'-R(GPGPCPCPC)-3') (nucleic acid)
Unique Ligands	MG

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3KMQ \| pdb_00003kmq	Download File View File

G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure

Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.

(2010) J Virol 84: 6188-6199

Released	2010-07-07
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) RNA (5'-R(GPGPCPCPC)-3') (nucleic acid) RNA (5'-R(PGPGPGPCPC)-3') (nucleic acid)

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3KMS \| pdb_00003kms	Download File View File

G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure

Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.

(2010) J Virol 84: 6188-6199

Released	2010-07-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) RNA (5'-R(APUPGPGPGPCPC)-3') (nucleic acid) RNA (5'-R(GPGPCPCPC)-3') (nucleic acid)
Unique Ligands	MG

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3KNA \| pdb_00003kna	Download File View File

M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA

Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.

(2010) J Virol 84: 6188-6199

Released	2010-07-07
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) RNA (5'-R(APUPGPGPGPCPC)-3') (nucleic acid) RNA (5'-R(GPGPCPCPC)-3') (nucleic acid)
Unique Ligands	MG

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3KOA \| pdb_00003koa	Download File View File

M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA and GTP

Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.

(2010) J Virol 84: 6188-6199

Released	2010-07-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) RNA (5'-R(PAPUPGPGPGPC)-3') (nucleic acid) RNA (5'-R(PCPCPCPG)-3') (nucleic acid)
Unique Ligands	DPO, MG

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3NKY \| pdb_00003nky	Download File View File

Structure of a mutant P44S of Foot-and-mouth disease Virus RNA-dependent RNA polymerase

Agudo, R., Ferrer-Orta, C., Arias, A., Perez-Luque, R., Verdaguer, N., Domingo, E.

(2010) PLoS Pathog 6: e1001072-e1001072

Released	2011-05-25
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein)
Unique Ligands	MG

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3NL0 \| pdb_00003nl0	Download File View File

Mutant P44S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase

Agudo, R., Ferrer-Orta, C., Arias, A., Perez-Luque, R., Verdaguer, N., Domingo, E.

(2010) PLoS Pathog 6: e1001072-e1001072

Released	2011-07-13
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Foot and mouth disease virus C
Macromolecule	3D polymerase (protein) 5'-R(GGPGPCPCPC)-3' (nucleic acid) 5'-R(PUPGPGPGPCPCP*C)-3' (nucleic acid)
Unique Ligands	MG

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3NMA \| pdb_00003nma	Download File View File

Mutant P169S of Foot-and-mouth disease Virus RNA dependent RNA-polymerase

Agudo, R., Ferrer-Orta, C., Arias, A., Perez-Luque, R., Verdaguer, N., Domingo, E.

(2010) PLoS Pathog 6: e1001072-e1001072

Released	2011-05-25
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Foot and mouth disease virus C
Macromolecule	Genome polyprotein (protein) 5'-R(GPGPC)-3' (nucleic acid) 5'-R(PCP*C)-3' (nucleic acid)
Unique Ligands	MG

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4IQX \| pdb_00004iqx	Download File View File

Mutant P44S P169S M296I of Foot-and-mouth disease Virus RNA-dependent RNA polymerase

Ferrer-Orta, C., Verdaguer, N., Agudo, R., Perez-Luque, R.

(2010) PLoS Pathog 6: e1001072-e1001072

Released	2013-02-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Foot and mouth disease virus C synthetic construct
Macromolecule	3D polymerase (protein) RNA (5'-R(APUPGPGPGPCPC)-3') (nucleic acid) RNA (5'-R(GPGPCPCPC)-3') (nucleic acid)