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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Kang, L.-W."

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Search Summary

This query matches 20 Structures.

Refinements

Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Mycobacterium tuberculosis (6)
	Human immunodeficiency virus 1 (4)
	Thermococcus onnurineus NA1 (3)
	Streptomyces avermitilis MA-4680 = NBRC 14893 (2)
	Xanthomonas oryzae pv. oryzae KACC 10331 (2)
	Acetivibrio thermocellus ATCC 27405 (1)
	Paenibacillus sp. X4 (1)
	Yersinia pestis (1)

Taxonomy

	Bacteria (13)
	Riboviria (4)
	Archaea (3)

Experimental Method

X-RAY DIFFRACTION (20)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (14)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (9)
	2010 - 2014 (2)
	2015 - 2019 (9)

Enzyme Classification Name

	Hydrolases (11)
	Transferases (3)
	Ligases (2)
	Isomerases (1)

Symmetry Type

	Cyclic (16)
	Asymmetric (4)

SCOP Classification

	Alpha and beta proteins (a/b) (6)
	Alpha and beta proteins (a+b) (7)
	All alpha proteins (4)
	All beta proteins (5)
	Artifacts (3)

AllSelected

1 to 20 of 20 Structures

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1MK1 \| pdb_00001mk1	Download File View File

Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme

Kang, L.-W., Gabelli, S.B., Bianchet, M.A., Cunningham, J.E., O'Handley, S.F., Amzel, L.M.

(2003) Structure 11: 1015-1023

Released	2003-08-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADPR pyrophosphatase (protein)
Unique Ligands	APR

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1MP2 \| pdb_00001mp2	Download File View File

Structure of MT-ADPRase (Apoenzyme), a Nudix hydrolase from Mycobacterium tuberculosis

Kang, L.-W., Gabelli, S.B., Bianchet, M.A., Cunningham, J.E., O'Handley, S.F., Amzel, L.M.

(2003) Structure 11: 1015-1023

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADPR pyrophosphatase (protein)

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1MQE \| pdb_00001mqe	Download File View File

Structure of the MT-ADPRase in complex with gadolidium and ADP-ribose, a Nudix enzyme

Kang, L.-W., Gabelli, S.B., Bianchet, M.A., Cunningham, J.E., O'Handley, S.F., Amzel, L.M.

(2003) Structure 11: 1015-1023

Released	2003-08-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADPR pyrophosphatase (protein)
Unique Ligands	APR, GD3

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1MQW \| pdb_00001mqw	Download File View File

Structure of the MT-ADPRase in complex with three Mn2+ ions and AMPCPR, a Nudix enzyme

Kang, L.-W., Gabelli, S.B., Bianchet, M.A., Cunningham, J.E., O'Handley, S.F., Amzel, L.M.

(2003) Structure 11: 1015-1023

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADPR pyrophosphatase (protein)
Unique Ligands	ADV, MN

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1MR2 \| pdb_00001mr2	Download File View File

Structure of the MT-ADPRase in complex with 1 Mn2+ ion and AMP-CP (a inhibitor), a nudix enzyme

Kang, L.-W., Gabelli, S.B., Bianchet, M.A., Cunningham, J.E., O'Handley, S.F., Amzel, L.M.

(2003) Structure 11: 1015-1023

Released	2003-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADPR pyrophosphatase (protein)
Unique Ligands	A12, MN

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1MRW \| pdb_00001mrw	Download File View File

Structure of HIV protease (Mutant Q7K L33I L63I) complexed with KNI-577

Vega, S., Kang, L.-W., Velazquez-Campoy, A., Kiso, Y., Amzel, L.M., Freire, E.

(2004) Proteins 55: 594-602

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	K57

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1MRX \| pdb_00001mrx	Download File View File

Structure of HIV protease (Mutant Q7K L33I L63I V82F I84V ) complexed with KNI-577

Vega, S., Kang, L.-W., Velazquez-Campoy, A., Kiso, Y., Amzel, L.M., Freire, E.

(2004) Proteins 55: 594-602

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	K57

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1MSM \| pdb_00001msm	Download File View File

The HIV protease (mutant Q7K L33I L63I) complexed with KNI-764 (an inhibitor)

Vega, S., Kang, L.-W., Velazquez-Campoy, A., Kiso, Y., Amzel, L.M., Freire, E.

(2004) Proteins 55: 594-602

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	JE2

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1MSN \| pdb_00001msn	Download File View File

The HIV protease (mutant Q7K L33I L63I V82F I84V) complexed with KNI-764 (an inhibitor)

Vega, S., Kang, L.-W., Velazquez-Campoy, A., Kiso, Y., Amzel, L.M., Freire, E.

(2004) Proteins 55: 594-602

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	JE2

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3NX6 \| pdb_00003nx6	Download File View File

Crystal Structure of co-chaperonin, GroES (Xoo4289) from Xanthomonas oryzae pv. oryzae KACC10331

Natarajan, S., Doan, T.T.N., Kang, L.-W.

To be published

Released	2010-07-28
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Xanthomonas oryzae pv. oryzae KACC 10331
Macromolecule	10kDa chaperonin (protein)

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3PH4 \| pdb_00003ph4	Download File View File

Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-allose

Jung, J., Kim, J.-K., Yeom, S.-J., Ahn, Y.-J., Oh, D.-K., Kang, L.-W.

(2011) Appl Microbiol Biotechnol 90: 517-527

Released	2011-04-13
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	Ribose-5-phosphate isomerase (protein)
Unique Ligands	AOS

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4ZQI \| pdb_00004zqi	Download File View File

Crystal structure of Apo D-alanine-D-alanine ligase(DDL) from Yersinia pestis

Tran, H.-T., Kang, L.-W., Hong, M.-K., Ngo, H.P.T., Huynh, K.H., Ahn, Y.J.

(2016) Acta Crystallogr D Struct Biol 72: 12-21

Released	2016-01-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Yersinia pestis
Macromolecule	D-alanine--D-alanine ligase (protein)
Unique Ligands	NA

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5B7U \| pdb_00005b7u	Download File View File

Apo Structure of Cysteine Desulfurase from Thermococcus onnurineus NA1 at 1.89A

Ho, T.-H., Kang, L.-W.

(2017) Archaea 2017: 5395293-5395293

Released	2017-06-14
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	Cysteine desulfurase (protein)
Unique Ligands	CYS, IPA

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5B87 \| pdb_00005b87	Download File View File

Crystal structure of a Cysteine Desulfurase from Thermococcus onnurineus NA1 in complex with alanine at 2.3 Angstrom resolution

Ho, T.-H., Kang, L.-W.

(2017) Archaea 2017: 5395293-5395293

Released	2017-06-14
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	Cysteine desulfurase (protein)
Unique Ligands	ALA, PLP

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5B89 \| pdb_00005b89	Download File View File

Crystal structure of a Cysteine Desulfurase from Thermococcus onnurineus NA1 in complex with alanine at 1.5 Angstrom resolution

Ho, T.-H., Kang, L.-W.

(2017) Archaea 2017: 5395293-5395293

Released	2017-06-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	Cysteine desulfurase (protein)
Unique Ligands	ALA, EDO, GOL, PLP

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5CJE \| pdb_00005cje	Download File View File

Structure of CYP107L2

Pham, T.-V., Han, S.-H., Kim, J.-H., Kim, D.-H., Kang, L.-W.

To be published

Released	2016-07-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptomyces avermitilis MA-4680 = NBRC 14893
Macromolecule	Cytochrome P450 hydroxylase (protein)
Unique Ligands	GOL, HEM

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5CWE \| pdb_00005cwe	Download File View File

Structure of CYP107L2 from Streptomyces avermitilis with lauric acid

Pham, T.-V., Han, S.-H., Kim, J.-H., Kim, D.-H., Kang, L.-W.

To be published

Released	2016-08-03
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Streptomyces avermitilis MA-4680 = NBRC 14893
Macromolecule	Cytochrome P450 hydroxylase (protein)
Unique Ligands	DAO, GOL, HEM, SO4

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5H4V \| pdb_00005h4v	Download File View File

Structure of glutamyl-tRNA synthetase (Xoo1504) from Xanthomonas oryzae pv. oryzae

Doan, T.-N.-T., Ho, T.-H., Kang, L.-W.

(2017) Crop Pasture Sci 68: 434-441

Released	2017-10-11
Method	X-RAY DIFFRACTION 3 Å
Organisms	Xanthomonas oryzae pv. oryzae KACC 10331
Macromolecule	Glutamate--tRNA ligase (protein)

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5I8U \| pdb_00005i8u	Download File View File

Crystal Structure of the RV1700 (MT ADPRASE) E142Q mutant

Thirawatananond, P., Kang, L.-W., Amzel, L.M., Gabelli, S.B.

(2016) J Bioenerg Biomembr 48: 557-567

Released	2016-10-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ADP-ribose pyrophosphatase (protein)
Unique Ligands	FMT, NA, PEG, SO4

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5XD0 \| pdb_00005xd0	Download File View File

Apo Structure of Beta-1,3-1,4-glucanase from Paenibacillus sp.X4

Baek, S.C., Ho, T.-H., Kang, L.-W., Kim, H.

(2017) Appl Microbiol Biotechnol 101: 4073-4083

Released	2017-04-19
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Paenibacillus sp. X4
Macromolecule	Glucanase (protein)
Unique Ligands	PEG, PGE

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1MK1 | pdb_00001mk1

Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme

1MP2 | pdb_00001mp2

Structure of MT-ADPRase (Apoenzyme), a Nudix hydrolase from Mycobacterium tuberculosis

1MQE | pdb_00001mqe

Structure of the MT-ADPRase in complex with gadolidium and ADP-ribose, a Nudix enzyme

1MQW | pdb_00001mqw

Structure of the MT-ADPRase in complex with three Mn2+ ions and AMPCPR, a Nudix enzyme

1MR2 | pdb_00001mr2

Structure of the MT-ADPRase in complex with 1 Mn2+ ion and AMP-CP (a inhibitor), a nudix enzyme

1MRW | pdb_00001mrw

Structure of HIV protease (Mutant Q7K L33I L63I) complexed with KNI-577

1MRX | pdb_00001mrx

Structure of HIV protease (Mutant Q7K L33I L63I V82F I84V ) complexed with KNI-577

1MSM | pdb_00001msm

The HIV protease (mutant Q7K L33I L63I) complexed with KNI-764 (an inhibitor)

1MSN | pdb_00001msn

The HIV protease (mutant Q7K L33I L63I V82F I84V) complexed with KNI-764 (an inhibitor)

3NX6 | pdb_00003nx6

Crystal Structure of co-chaperonin, GroES (Xoo4289) from Xanthomonas oryzae pv. oryzae KACC10331

3PH4 | pdb_00003ph4

Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-allose

4ZQI | pdb_00004zqi

Crystal structure of Apo D-alanine-D-alanine ligase(DDL) from Yersinia pestis

5B7U | pdb_00005b7u

Apo Structure of Cysteine Desulfurase from Thermococcus onnurineus NA1 at 1.89A

5B87 | pdb_00005b87

Crystal structure of a Cysteine Desulfurase from Thermococcus onnurineus NA1 in complex with alanine at 2.3 Angstrom resolution

5B89 | pdb_00005b89

Crystal structure of a Cysteine Desulfurase from Thermococcus onnurineus NA1 in complex with alanine at 1.5 Angstrom resolution

5CJE | pdb_00005cje

Structure of CYP107L2

5CWE | pdb_00005cwe

Structure of CYP107L2 from Streptomyces avermitilis with lauric acid

5H4V | pdb_00005h4v

Structure of glutamyl-tRNA synthetase (Xoo1504) from Xanthomonas oryzae pv. oryzae

5I8U | pdb_00005i8u

Crystal Structure of the RV1700 (MT ADPRASE) E142Q mutant

5XD0 | pdb_00005xd0

Apo Structure of Beta-1,3-1,4-glucanase from Paenibacillus sp.X4

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1MK1 | pdb_00001mk1

1MP2 | pdb_00001mp2

1MQE | pdb_00001mqe

1MQW | pdb_00001mqw

1MR2 | pdb_00001mr2

1MRW | pdb_00001mrw

1MRX | pdb_00001mrx

1MSM | pdb_00001msm

1MSN | pdb_00001msn

3NX6 | pdb_00003nx6

3PH4 | pdb_00003ph4

4ZQI | pdb_00004zqi

5B7U | pdb_00005b7u

5B87 | pdb_00005b87

5B89 | pdb_00005b89

5CJE | pdb_00005cje

5CWE | pdb_00005cwe

5H4V | pdb_00005h4v

5I8U | pdb_00005i8u

5XD0 | pdb_00005xd0