Structure Determination Methodology Scientific Name of Source Organism Refinement Resolution (Å) Enzyme Classification Name -- Tabular Report -- Entry IDs Create Custom Report Structure Sequence Ligand Oligosaccharide Structural Genomics Center Primary Citation Biological Details Sequence Clusters Binding Affinity Crystallization Data Collection Refinement Refinement Parameters Unit Cell NMR Representative Model NMR Spectrometer NMR Sample Conditions NMR Refinement NMR Ensemble NMR Software EM Structure
Yokoyama, T. , Mizuguchi, M. , Nabeshima, Y. , Kusaka, K. , Yamada, T. , Hosoya, T. , Ohhara, T. , Kurihara, K. , Tomoyori, K. , Tanaka, I. , Niimura, N.
(2012) J Struct Biol 177 : 283-290
Released 2012-02-22 Method X-RAY DIFFRACTION 1.7 Å
Organisms Macromolecule
Yokoyama, T. , Mizuguchi, M. , Nabeshima, Y. , Kusaka, K. , Yamada, T. , Hosoya, T. , Ohhara, T. , Kurihara, K. , Tomoyori, K. , Tanaka, I. , Niimura, N.
(2012) J Struct Biol 177 : 283-290
Released 2012-02-22 Method NEUTRON DIFFRACTION 2 Å
Organisms Macromolecule
Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Tanaka, I. , Niimura, N. , Samejima, M. , Igarashi, K.
(2015) Sci Adv 1 : e1500263-e1500263
Released 2015-10-07 Method NEUTRON DIFFRACTION 1.5 Å
X-RAY DIFFRACTION 1 Å
Organisms Macromolecule
Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Tanaka, I. , Niimura, N. , Samejima, M. , Igarashi, K.
(2015) Sci Adv 1 : e1500263-e1500263
Released 2015-10-14 Method NEUTRON DIFFRACTION 1.518 Å
X-RAY DIFFRACTION 0.99 Å
Organisms Macromolecule Unique branched monosaccharides BGC
Yokoyama, T. , Mizuguchi, M. , Ostermann, A. , Kusaka, K. , Niimura, N. , Schrader, T.E. , Tanaka, I.
(2015) J Med Chem 58 : 7549-7556
Released 2015-10-14 Method X-RAY DIFFRACTION 1.402 Å
NEUTRON DIFFRACTION 2.4 Å
Organisms Macromolecule Unique Ligands MG , RIS
Yokoyama, T. , Mizuguchi, M. , Ostermann, A. , Kusaka, K. , Niimura, N. , Schrader, T.E. , Tanaka, I.
(2015) J Med Chem 58 : 7549-7556
Released 2015-10-14 Method X-RAY DIFFRACTION 1.7 Å
NEUTRON DIFFRACTION 2.4 Å
Organisms Macromolecule Unique Ligands IPE , MG , RIS
Tsukui, S. , Kimura, F. , Kusaka, K. , Baba, S. , Mizuno, N. , Kimura, T.
(2016) Acta Crystallogr D Struct Biol 72 : 823-829
Released 2016-07-20 Method X-RAY DIFFRACTION 1.76 Å
Organisms Macromolecule
Tsukui, S. , Kimura, F. , Kusaka, K. , Baba, S. , Mizuno, N. , Kimura, T.
(2016) Acta Crystallogr D Struct Biol 72 : 823-829
Released 2016-07-20 Method X-RAY DIFFRACTION 2.424 Å
Organisms Macromolecule
Fukuda, Y. , Hirano, Y. , Kusaka, K. , Inoue, T. , Tamada, T.
(2020) Proc Natl Acad Sci U S A 117 : 4071-4077
Released 2020-02-12 Method X-RAY DIFFRACTION 1.3 Å
NEUTRON DIFFRACTION 1.5 Å
Organisms Macromolecule Unique Ligands CL , CU , MPD , NA
Murakawa, T. , Kurihara, K. , Shoji, M. , Shibazaki, C. , Sunami, T. , Tamada, T. , Yano, N. , Yamada, T. , Kusaka, K. , Suzuki, M. , Shigeta, Y. , Kuroki, R. , Hayashi, H. , Yano, Y. , Tanizawa, K. , Adachi, M. , Okajima, T.
(2020) Proc Natl Acad Sci U S A 117 : 10818-10824
Released 2020-04-29 Method X-RAY DIFFRACTION 1.14 Å
NEUTRON DIFFRACTION 1.72 Å
Organisms Macromolecule Unique Ligands CU , NA
Hanazono, Y. , Hirano, Y. , Takeda, K. , Kusaka, K. , Tamada, T. , Miki, K.
(2022) Sci Adv 8 : eabn2276-eabn2276
Released 2022-06-01 Method X-RAY DIFFRACTION 0.66 Å
NEUTRON DIFFRACTION 1.2 Å
Organisms Macromolecule Unique Ligands D3O , GOL , NH4 , SF4 , SO4
Yano, N. , Kondo, T. , Kusaka, K. , Yamada, T. , Arakawa, T. , Sakamoto, T. , Fushinobu, S.
(2024) J Biological Chem 300 : 105774-105774
Released 2023-08-09 Method X-RAY DIFFRACTION 1.25 Å
NEUTRON DIFFRACTION 1.8 Å
Organisms Macromolecule Unique Ligands ACT , CA , NA , RAM , TRS Unique branched monosaccharides BMA, MAN, NAG
Yano, N. , Kondo, T. , Kusaka, K. , Yamada, T. , Arakawa, T. , Sakamoto, T. , Fushinobu, S.
(2024) J Biological Chem 300 : 105774-105774
Released 2024-01-24 Method X-RAY DIFFRACTION 1.06 Å
Organisms Macromolecule Unique Ligands ACT , CA , NA , RAM , TRS Unique branched monosaccharides BMA, MAN, NAG
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 1.36 Å
NEUTRON DIFFRACTION 1.86 Å
Organisms Macromolecule
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 1.4 Å
NEUTRON DIFFRACTION 1.8 Å
Organisms Macromolecule Unique Ligands BGC , NA Unique branched monosaccharides BGC, GLC
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 1.4 Å
NEUTRON DIFFRACTION 2.15 Å
Organisms Macromolecule
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 1.8 Å
NEUTRON DIFFRACTION 2.59 Å
Organisms Macromolecule Unique Ligands BGC , NA Unique branched monosaccharides BGC, GLC
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 0.8 Å
Organisms Macromolecule Unique Ligands ACT , MPD
Tachioka, M. , Yamaguchi, S. , Nakamura, A. , Ishida, T. , Kusaka, K. , Yamada, T. , Yano, N. , Chatake, T. , Tamada, T. , Takeda, K. , Niwa, S. , Tanaka, H. , Takahashi, S. , Inaka, K. , Furubayashi, N. , Deguchi, S. , Samejima, M. , Igarashi, K.
To be published
Released 2025-03-12 Method X-RAY DIFFRACTION 0.85 Å
Organisms Macromolecule Unique Ligands BGC , CL , NA , PEG Unique branched monosaccharides BGC, GLC
