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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Lu, X."

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Search Summary

This query matches 73 Structures.

Refinements

Structure Determination Methodology

experimental (73)

Scientific Name of Source Organism

	Homo sapiens (22)
	Simian rotavirus (9)
	Influenza A virus (A/Indonesia/5/2005(H5N1)) (6)
	Pseudomonas aeruginosa (4)
	Thermotoga maritima MSB8 (4)
	Influenza A virus (A/Viet Nam/1203/2004(H5N1)) (3)
	Alcaligenes sp. AL3007 (2)
	Influenza A virus (A/black-headed gull/Sweden/2/99(H16N3)) (2)
	Influenza A virus (A/gull/Maryland/704/1977(H13N6)) (2)
	Japanese encephalitis virus strain SA-14 (2)

More...

Taxonomy

	Eukaryota (31)
	Riboviria (28)
	Bacteria (15)

Experimental Method

	X-RAY DIFFRACTION (67)
	SOLUTION NMR (6)

Polymer Entity Type

	Protein (73)
	RNA (7)
	DNA (4)

Refinement Resolution (Å)

	1.5 - 2.0 (17)
	2.0 - 2.5 (23)
	2.5 - 3.0 (19)
	3.0 - 3.5 (7)
	4.0 - 4.5 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (1)
	2000 - 2004 (3)
	2005 - 2009 (17)
	2010 - 2014 (23)
	2015 - 2019 (21)
	2020 - 2024 (7)

Enzyme Classification Name

	Transferases (12)
	Oxidoreductases (9)
	Hydrolases (7)
	Ligases (4)
	Isomerases (1)

Membrane Protein Annotation

	OPM (3)
	MemProtMD (1)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Cyclic (39)
	Asymmetric (33)
	Dihedral (4)

SCOP Classification

	All beta proteins (25)
	Artifacts (21)
	Coiled coil proteins (13)
	Alpha and beta proteins (a+b) (9)
	All alpha proteins (2)
	Alpha and beta proteins (a/b) (7)
	Multi-domain proteins (alpha and beta) (3)
	Membrane and cell surface proteins and peptides (2)
	Small proteins (2)

AllSelected

1 to 25 of 73 Structures

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1BL4	Download File View File

FKBP MUTANT F36V COMPLEXED WITH REMODELED SYNTHETIC LIGAND

Hatada, M.H., Clackson, T., Yang, W., Rozamus, L.W., Amara, J., Rollins, C.T., Stevenson, L.F., Magari, S.R., Wood, S.A., Courage, N.L., Lu, X., Cerasoli Junior, F., Gilman, M., Holt, D.

(1998) Proc Natl Acad Sci U S A 95: 10437-10442

Released	1998-09-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (FK506 BINDING PROTEIN) (protein)
Unique Ligands	AP1

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1DRS	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE RGD-CONTAINING NEUROTOXIN HOMOLOGUE, DENDROASPIN

Sutcliffe, M.J., Jaseja, M., Hyde, E.I., Lu, X., Williams, J.A.

(1994) Nat Struct Biol 1: 802-807

Released	1994-12-20
Method	SOLUTION NMR
Organisms	Dendroaspis jamesoni kaimosae
Macromolecule	DENDROASPIN (protein)

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1FBZ	Download File View File

Structure-based design of a novel, osteoclast-selective, nonpeptide Src SH2 inhibitor with in vivo anti-resorptive activity

Shakespeare, W., Yang, M., Bohacek, R., Cerasoli, F., Stebbis, K., Sundaramoorthi, R., Vu, C., Pradeepan, S., Metcalf, C., Haraldson, C., Merry, T., Dalgarno, D., Narula, S., Hatada, M., Lu, X., Van Schravendijk, M.R., Adams, S., Violette, S., Smith, J., Guan, W., Bartlett, C., Herson, J., Iuliucci, J., Weigele, M., Sawyer, T.

(2000) Proc Natl Acad Sci U S A 97: 9373-9378

Released	2000-08-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	PROTO-ONCOGENE TYROSINE-PROTEIN KINASE LCK (protein)
Unique Ligands	CC1

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1T5D	Download File View File

4-Chlorobenzoyl-CoA Ligase/Synthetase bound to 4-chlorobenzoate

Gulick, A.M., Lu, X., Dunaway-Mariano, D.

(2004) Biochemistry 43: 8670-8679

Released	2004-08-03
Method	X-RAY DIFFRACTION 2.206 Å
Organisms	Alcaligenes sp. AL3007
Macromolecule	4-chlorobenzoyl CoA ligase (protein)
Unique Ligands	174, CA

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1T5H	Download File View File

4-Chlorobenzoyl-CoA Ligase/Synthetase unliganded, selenomethionine

Gulick, A.M., Lu, X., Dunaway-Mariano, D.

(2004) Biochemistry 43: 8670-8679

Released	2004-08-03
Method	X-RAY DIFFRACTION 2.002 Å
Organisms	Alcaligenes sp. AL3007
Macromolecule	4-chlorobenzoyl CoA ligase (protein)
Unique Ligands	CA

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2A9G	Download File View File

Structure of C406A arginine deiminase in complex with L-arginine

Galkin, A., Lu, X., Dunaway-Mariano, D., Herzberg, O.

(2005) J Biol Chem 280: 34080-34087

Released	2005-08-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Arginine deiminase (protein)
Unique Ligands	ARG

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2AAF	Download File View File

Structure of H278A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate

Galkin, A., Lu, X., Dunaway-Mariano, D., Herzberg, O.

(2005) J Biol Chem 280: 34080-34087

Released	2005-08-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Arginine deiminase (protein)

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2ABR	Download File View File

Structure of D280A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate

Galkin, A., Lu, X., Dunaway-Mariano, D., Herzberg, O.

(2005) J Biol Chem 280: 34080-34087

Released	2005-08-09
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Arginine deiminase (protein)

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2ACI	Download File View File

Structure of D166A arginine deiminase

Galkin, A., Lu, X., Dunaway-Mariano, D., Herzberg, O.

(2005) J Biol Chem 280: 34080-34087

Released	2005-08-09
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Arginine deiminase (protein)

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2LKB	Download File View File

Evolutionary diversification of Mesobuthus alpha-scorpion toxins affecting sodium channels

Zhu, S., Peigneur, S., Gao, B., Lu, X., Cao, C., Tytgat, J.

(2011) Mol Cell Proteomics

Released	2011-11-02
Method	SOLUTION NMR
Organisms	Mesobuthus eupeus
Macromolecule	Neurotoxin MeuNaTx-5 (protein)

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2R7O	Download File View File

Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (N-terminal hexahistidine-tagged)

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 3.35 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein)

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2R7Q	Download File View File

Crystal Structure of VP1 apoenzyme of Rotavirus SA11 (C-terminal hexahistidine-tagged)

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein)

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2R7R	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC) complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(UPGPUPGPAPCP*C)-3') (nucleic acid)

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2R7S	Download File View File

Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 3.24 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(UPGPUPGPCPC)-3') (nucleic acid)
Unique Ligands	PO4

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2R7T	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGAACC) Complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 3 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(UPGPUPGPAPAPCPC)-3') (nucleic acid)

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2R7U	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (AAAAGCC) Complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(APAAPAPGPCP*C)-3') (nucleic acid)

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2R7V	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (GGCUUU) Complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(GGPCPUPUPU)-3') (nucleic acid)

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2R7W	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/mRNA 5'-CAP (m7GpppG) complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(UPGPUPGPAPCP*C)-3') (nucleic acid)
Unique Ligands	GTP

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2R7X	Download File View File

Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/GTP complex

Lu, X., Harrison, S.C., Tao, Y.J., Patton, J.T., Nibert, M.L.

(2008) Structure 16: 1678-1688

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Simian rotavirus
Macromolecule	RNA-dependent RNA polymerase (protein) RNA (5'-R(UPGPUPGPAPCP*C)-3') (nucleic acid)
Unique Ligands	GTP

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2VGE	Download File View File

Crystal structure of the C-terminal region of human iASPP

Robinson, R.A., Lu, X., Jones, E.Y., Siebold, C.

(2008) Structure 16: 259

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	RELA-ASSOCIATED INHIBITOR (protein)

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3C1B	Download File View File

The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure

Lu, X., Simon, M., Chodaparambil, J., Hansen, J., Shokat, K., Luger, K.

(2008) Nat Struct Mol Biol 15: 1122-1124

Released	2008-10-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Xenopus laevis Xenopus tropicalis
Macromolecule	Histone 2, H2bf (protein) Histone H2A type 1 (protein) Histone H3-like (protein) Histone H4 (protein) Palindromic 146bp Human Alpha satellite DNA (nucleic acid)

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3C1C	Download File View File

The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure

Lu, X., Simon, M., Chodaparambil, J., Hansen, J., Shokat, K., Luger, K.

(2008) Nat Struct Mol Biol 15: 1122-1124

Released	2008-10-07
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Xenopus laevis Xenopus tropicalis
Macromolecule	Histone 2, H2bf (protein) Histone H2A type 1 (protein) Histone H3-like (protein) Histone H4 (protein) Palindromic 146bp Human Alpha satellite DNA (nucleic acid)

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3DLP	Download File View File

4-Chlorobenzoyl-CoA Ligase/Synthetase, Mutant D402P, bound to 4CB

Wu, R., Cao, J., Reger, A.S., Lu, X., Gulick, A.M., Dunaway-Mariano, D.

(2009) Biochemistry 48: 4115-4125

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Alcaligenes sp.
Macromolecule	4-Chlorobenzoate CoA Ligase/Synthetase (protein)
Unique Ligands	174

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4EOT	Download File View File

Crystal structure of the MafA homodimer bound to the consensus MARE

Lu, X., Guanga, G., Wan, C., Rose, R.B.

(2012) Biochemistry 51: 9706-9717

Released	2012-11-28
Method	X-RAY DIFFRACTION 2.855 Å
Organisms	Homo sapiens
Macromolecule	Transcription factor MafA (protein) 5'-D(CPCPCPTPGPCPTPGPAPCPTPCPAPGPCPAPCPCPG)-3' (nucleic acid) 5'-D(CPCPGPGPTPGPCPTPGPAPGPTPCPAPGPCPAPGPG)-3' (nucleic acid)
Unique Ligands	SO4

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4F23	Download File View File

Influenza A virus hemagglutinin H16 HA0 structure with an alpha-helix conformation in the cleavage site: a potential drug target

Lu, X., Shi, Y., Gao, F., Xiao, H., Qi, J., Gao, G.F.

(2012) J Virol 86: 12861-12870

Released	2012-11-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Influenza A virus (A/black-headed gull/Sweden/2/99(H16N3))
Macromolecule	Hemagglutinin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

1 to 25 of 73 Structures

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