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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Nam, H.-J."

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (6)
	adeno-associated virus 8 (6)
	Aequorea victoria (2)
	H-1 parvovirus (2)
	Adeno-associated virus (1)
	Adeno-associated virus 9 (1)
	synthetic construct (1)

Taxonomy

	Monodnaviria (10)
	Eukaryota (8)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (16)

Polymer Entity Type

	Protein (16)
	DNA (5)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	2.5 - 3.0 (9)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (1)
	2010 - 2014 (10)
	2015 - 2019 (2)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (1)
	Hydrolases (1)

Symmetry Type

	Icosahedral (10)
	Asymmetric (5)
	Cyclic (1)

SCOP Classification

	All beta proteins (9)
	Alpha and beta proteins (a+b) (3)
	Artifacts (2)
	All alpha proteins (1)
	Alpha and beta proteins (a/b) (1)

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1 to 16 of 16 Structures

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1LAR	Download File View File

CRYSTAL STRUCTURE OF THE TANDEM PHOSPHATASE DOMAINS OF RPTP LAR

Nam, H.-J., Poy, F., Krueger, N., Saito, H., Frederick, C.A.

(1999) Cell 97: 449-457

Released	2000-04-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (LAR) (protein)

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2ABL	Download File View File

SH3-SH2 DOMAIN FRAGMENT OF HUMAN BCR-ABL TYROSINE KINASE

Nam, H.-J., Frederick, C.A.

(1996) Structure 4: 1105-1114

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	ABL TYROSINE KINASE (protein)

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2QA0	Download File View File

Structure of Adeno-Associated virus serotype 8

Nam, H.-J.

(2007) J Virol 81: 12260-12271

Released	2008-04-08
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	adeno-associated virus 8
Macromolecule	Capsid protein (protein)
Unique Ligands	NA

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3RA2	Download File View File

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Nam, H.-J., Gurda, B., McKenna, R., Porter, M., Byrne, B., Salganik, M., Muzyczka, N., Agbandje-McKenna, M.

(2011) J Virol 85: 11791-11799

Released	2011-09-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	adeno-associated virus 8
Macromolecule	Capsid protein (protein)

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3RA4	Download File View File

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Nam, H.-J., Gurda, B., McKenna, R., Porter, M., Byrne, B., Salganik, M., Muzyczka, N., Agbandje-McKenna, M.

(2011) J Virol 85: 11791-11799

Released	2011-09-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Aequorea victoria adeno-associated virus 8
Macromolecule	Capsid protein (protein) DNA (5'-D(CPA)-3') (nucleic acid)

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3RA8	Download File View File

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Nam, H.-J., Gurda, B., McKenna, R., Porter, M., Byrne, B., Salganik, M., Muzyczka, N., Agbandje-McKenna, M.

(2011) J Virol 85: 11791-11799

Released	2011-09-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	adeno-associated virus 8
Macromolecule	Capsid protein (protein)
Unique Ligands	AMP

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3RA9	Download File View File

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Nam, H.-J., Gurda, B., McKenna, R., Porter, M., Byrne, B., Salganik, M., Muzyczka, N., Agbandje-McKenna, M.

(2011) J Virol 85: 11791-11799

Released	2011-09-21
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Aequorea victoria adeno-associated virus 8
Macromolecule	Capsid protein (protein) DNA (5'-D(PCPA)-3') (nucleic acid)

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3RAA	Download File View File

Structural studies of AAV8 capsid transitions associated with endosomal trafficking

Nam, H.-J., Gurda, B., McKenna, R., Porter, M., Byrne, B., Salganik, M., Muzyczka, N., Agbandje-McKenna, M.

(2011) J Virol 85: 11791-11799

Released	2011-09-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	adeno-associated virus 8
Macromolecule	Capsid protein (protein)
Unique Ligands	AMP

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3RKQ	Download File View File

NKX2.5 Homeodomain dimer bound to ANF-242 DNA

Genis, C., Scone, P., Kasahara, H., Nam, H.-J.

(2012) Biochemistry 51: 6312-6319

Released	2012-05-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Homeobox protein Nkx-2.5 (protein) ANF-242 DNA (nucleic acid)
Unique Ligands	MG

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3UX1	Download File View File

Structural Characterization of Adeno-Associated Virus Serotype 9

DiMattia, M.A., Nam, H.-J., Van Vliet, K., Mitchell, M., McCall, A., Bennett, A., Gurda, B., McKenna, R., Potter, M., Sakai, Y., Byrne, B.J., Muzyczka, N., Aslanidi, G., Zolotukhin, S., Olson, N., Sinkovitis, R., Baker, T.S., Agbandje-McKenna, M.

(2012) J Virol 86: 6947-6958

Released	2012-05-02
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Adeno-associated virus 9
Macromolecule	Capsid protein VP1 (protein)

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4G0R	Download File View File

Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles

Halder, S., Agbandje-McKenna, M., Nam, H.-J., Govindasamy, L., Vogel, M., Dinsart, C., Salome, N., McKenna, R.

(2013) J Virol 87: 5128-5140

Released	2013-02-27
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	H-1 parvovirus
Macromolecule	Capsid protein VP1 (protein) DNA (5'-D(PCPTPGPAPCPTPTPCPAPA)-3') (nucleic acid)
Unique Ligands	CL, DC, EDO, MG, NA

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4GBT	Download File View File

Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles

Halder, S., Nam, H.-J., Govindasamy, L., Vogel, M., Dinsart, C., Salome, N., McKenna, R., Agbandje-McKenna, M.

(2013) J Virol 87: 5128-5140

Released	2013-02-27
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	H-1 parvovirus
Macromolecule	Capsid protein VP1 (protein)
Unique Ligands	CL, NA

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4IOV	Download File View File

The structure of AAVrh32.33, a Novel Gene Delivery Vector

Mikalism, K., Nam, H.-J., Van vilet, K., Vandenberghe, L.H., Mays, L.E., McKenna, R., Wilson, J., Agbandje-McKenna, M.

(2014) J Struct Biol 186: 308-317

Released	2014-04-02
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Adeno-associated virus
Macromolecule	Capsid protein VP1 (protein)
Unique Ligands	D5M

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5BXF	Download File View File

Apo FcRn Structure at pH 4.5

Nam, H.-J., Taha, M.

To be published

Released	2015-11-11
Method	X-RAY DIFFRACTION 2.851 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) IgG receptor FcRn large subunit p51 (protein)

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5KAZ	Download File View File

Human SH2D1B structure

Taha, M., Nezerwa, E., Nam, H.-J.

(2016) Protein Pept Lett 23: 862-866

Released	2017-04-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	SH2 domain-containing protein 1B (protein)
Unique Ligands	SO4

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6O3T	Download File View File

Structural basis of FOXC2 and DNA interactions

Nam, H.-J., Li, S.

(2019) ACS Omega 4: 10906-10914

Released	2020-01-15
Method	X-RAY DIFFRACTION 3.06 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Forkhead box protein C2 (protein) DNA (5'-D(APAPAPTPTPGPTPTPTPAPTPAPAPAPCPAPGPCPCPCPG)-3') (nucleic acid) DNA (5'-D(TPTPCPGPGPGPCPTPGPTPTPTPAPTPAPAPAPCPAPAPT)-3') (nucleic acid)

1 to 16 of 16 Structures

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