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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Silvestri, I."

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Search Summary

This query matches 29 Structures.

Refinements

Structure Determination Methodology

experimental (29)

Scientific Name of Source Organism

	Oceanobacillus iheyensis (13)
	Schistosoma mansoni (13)
	Brugia malayi (3)

Taxonomy

	Eukaryota (16)
	Bacteria (13)

Experimental Method

X-RAY DIFFRACTION (29)

Polymer Entity Type

	Protein (16)
	RNA (13)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (6)
	2.0 - 2.5 (4)
	2.5 - 3.0 (5)
	3.0 - 3.5 (6)
	3.5 - 4.0 (4)
	4.0 - 4.5 (1)
	> 4.5 (2)

Release Date

	2015 - 2019 (4)
	2020 - 2024 (25)

Enzyme Classification Name

Oxidoreductases (16)

Symmetry Type

Cyclic (16)

AllSelected

1 to 25 of 29 Structures

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6FMU	Download File View File

Thioredoxin glutathione reductase from Schistosome mansoni in complex with 2-[4-(4-amino-butyl)-piperazin-1-yl]-ethanol

Silvestri, I., Fata, F., MIele, A.E., Boumis, G., Williams, D.L., Angelucci, F.

(2018) ACS Chem Biol 13: 2190-2202

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	DVK, FAD, PGE

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6FMZ	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,4-Bis(2-hydroxyethyl)piperazine

Silvestri, I., Fata, F., MIele, A.E., Boumis, G., Williams, D.L., Angelucci, F.

(2018) ACS Chem Biol 13: 2190-2202

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	DVQ, FAD

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6FP4	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1,8-Naphthyridine-2-carboxylic acid

Silvestri, I., Fata, F., MIele, A.E., Boumis, G., Williams, D.L., Angelucci, F.

(2018) ACS Chem Biol 13: 2190-2202

Released	2018-06-06
Method	X-RAY DIFFRACTION 2.501 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	250, E1T, FAD, NA, PGE

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6FTC	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with HEPES

Silvestri, I., Fata, F., MIele, A.E., Boumis, G., Williams, D.L., Angelucci, F.

(2018) ACS Chem Biol 13: 2190-2202

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	EPE, FAD, PEG, PG4, PGE

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6RTJ	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 1 hour of soaking

Angelucci, F., Silvestri, I., Fata, F., Williams, D.L.

(2020) Free Radic Biol Med 147: 200-211

Released	2020-01-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	CA, FAD, FXH, PG4, PGE

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6RTM	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 2 hour of soaking

Angelucci, F., Silvestri, I., Fata, F., Williams, D.L.

(2020) Free Radic Biol Med 147: 200-211

Released	2020-01-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	FAD, K, KJH, PGE

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6RTO	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 4 hours of soaking

Angelucci, F., Silvestri, I., Fata, F., Williams, D.L.

(2020) Free Radic Biol Med 147: 200-211

Released	2020-01-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	FAD, KJH, PGE

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6ZLB	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with Indole-3-carbinol

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	DMS, FAD, FXK, K, PGE

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6ZLP	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 4-Aminopiazthiole

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	BTE, CA, DMS, FAD

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6ZP3	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 2-Methylindole-3-acetic acid

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	CA, DMS, DTT, FAD, K, PEG, PG4, PGE, QN5

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6ZST	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 3-(3-methoxyquinoxalin-2-yl)propanoic acid

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	EY7, FAD, K, PEG, PGE

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7B02	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 4-Hydroxy-7-methyl-1,8-naphthyridine-3-carboxylic acid

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	CL, DMS, FAD, K, NA, PEG, SJN

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7NPX	Download File View File

Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 3-(3-Methoxyquinoxalin-2-yl)propanoic acid at 24 hours of soaking

Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.

(2021) ACS Infect Dis 7: 1932-1944

Released	2021-05-19
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Schistosoma mansoni
Macromolecule	Thioredoxin glutathione reductase (protein)
Unique Ligands	CL, EY7, FAD, K, PEG

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7P0X	Download File View File

Crystal structure of Thioredoxin reductase from Brugia Malayi

Fata, F., Ardini, M., Silvestri, I., Gabriele, F., Cheng, Q., Arner, E.S.J., Williams, D.L.

(2022) Redox Biol 51: 102278-102278

Released	2022-04-06
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Brugia malayi
Macromolecule	Glutaredoxin domain-containing protein (protein)
Unique Ligands	CL, FAD, MPD, NA

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7PUT	Download File View File

Crystal structure of Thioredoxin Reductase from Brugia Malayi in complex with NADP(H)

Fata, F., Ardini, M., Silvestri, I., Gabriele, F., Ippoliti, R., Gencheva, R., Cheng, Q., Arner, E.S.J., Angelucci, F., Williams, D.L.

(2022) Redox Biol 51: 102278-102278

Released	2022-04-06
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Brugia malayi
Macromolecule	Glutaredoxin domain-containing protein (protein)
Unique Ligands	ATR, FAD, MPD

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7PVJ	Download File View File

Crystal structure of Thioredoxin Reductase from Brugia Malayi in complex with auranofin

Fata, F., Ardini, M., Silvestri, I., Gabriele, F., Ippoliti, R., Gencheva, R., Cheng, Q., Arner, E.S.J., Angelucci, F., Williams, D.L.

(2022) Redox Biol 51: 102278-102278

Released	2022-04-06
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Brugia malayi
Macromolecule	Glutaredoxin domain-containing protein (protein)
Unique Ligands	ATR, AU, FAD, MPD, NA

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8OLS	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and intronistat B

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Group IIC intron (nucleic acid)
Unique Ligands	EPE, K, MG, SPM, VTE

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8OLV	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Group IIC intron (nucleic acid)
Unique Ligands	EPE, K, MG, SPM, VTR

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8OLW	Download File View File

Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 4 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Group IIC intron (nucleic acid)
Unique Ligands	CA, K

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8OLY	Download File View File

Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3.11 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	5'-exon (nucleic acid) Group IIC intron (nucleic acid)
Unique Ligands	EPE, K, MG, SPM

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8OLZ	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	5'-exon (nucleic acid) DOMAINS 1-5 (nucleic acid)
Unique Ligands	EPE, K, MG, SPM, VTE

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8OM0	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+ and intronistat B

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3.61 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Domains 1-5 (nucleic acid)
Unique Ligands	GDE, MG, NA

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8RUH	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 4.55 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	5'-exon (nucleic acid) Domains 1-5 (nucleic acid)
Unique Ligands	EPE, K, MG

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8RUI	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Domains 1-5 (nucleic acid)
Unique Ligands	K, MG, VTE

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8RUJ	Download File View File

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking

Silvestri, I., Marcia, M.

(2024) Nat Commun 15: 4980-4980

Released	2024-06-19
Method	X-RAY DIFFRACTION 3.12 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Domains 1-5 (nucleic acid)
Unique Ligands	K, MG, VTR

1 to 25 of 29 Structures

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