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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Tampe, R."

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Search Summary

This query matches 22 Structures.

Refinements

Structure Determination Methodology

experimental (22)

Scientific Name of Source Organism

	Thermus thermophilus (9)
	Vicugna pacos (9)
	Homo sapiens (6)
	Thermus thermophilus HB27 (3)
	Mus musculus (2)
	Saccharolobus solfataricus (2)
	Aequorea victoria (1)
	Human alphaherpesvirus 1 strain 17 (1)
	Pyrococcus abyssi GE5 (1)
	Rattus norvegicus (1)

More...

Taxonomy

	Eukaryota (17)
	Bacteria (10)
	Archaea (3)
	Duplodnaviria (1)

Experimental Method

	ELECTRON MICROSCOPY (16)
	X-RAY DIFFRACTION (5)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (22)
	RNA (3)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	2.5 - 3.0 (6)
	3.0 - 3.5 (4)
	3.5 - 4.0 (6)
	4.0 - 4.5 (2)
	> 4.5 (2)

Release Date

	1995 - 1999 (1)
	2010 - 2014 (2)
	2015 - 2019 (14)
	2020 - 2024 (5)

Enzyme Classification Name

	Isomerases (3)
	Transferases (1)
	Translocases (1)

Membrane Protein Annotation

	PDBTM (11)
	OPM (8)
	mpstruc (10)
	MemProtMD (9)

Symmetry Type

	Asymmetric (21)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a/b) (4)
	Membrane and cell surface proteins and peptides (3)
	All beta proteins (2)
	Artifacts (1)
	Peptides (1)

AllSelected

1 to 22 of 22 Structures

Page 1 of 1

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1QLO \| pdb_00001qlo	Download File View File

Structure of the active domain of the herpes simplex virus protein ICP47 in water/sodium dodecyl sulfate solution determined by nuclear magnetic resonance spectroscopy

Pfaender, R., Neumann, L., Zweckstetter, M., Seger, C., Holak, T.A., Tampe, R.

(1999) Biochemistry 38: 13692

Released	1999-12-14
Method	SOLUTION NMR
Organisms	Human alphaherpesvirus 1 strain 17
Macromolecule	HERPES SIMPLEX VIRUS PROTEIN ICP47 (protein)

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3OZX \| pdb_00003ozx	Download File View File

Crystal structure of ABCE1 of Sulfolubus solfataricus (-FeS domain)

Barthelme, D., Tampe, R.

To be published

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Saccharolobus solfataricus
Macromolecule	RNase L inhibitor (protein)
Unique Ligands	ADP, MG, PO4

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4K8O \| pdb_00004k8o	Download File View File

CRYSTAL STRUCTURE OF THE ATPASE DOMAIN OF TAP1 WITH ATP (D645N, D651A MUTANT)

Vakkasoglu, A.S., Grossmann, N., Hulpke, S., Abele, R., Tampe, R., Gaudet, R.

(2014) Nat Commun 5: 5419-5419

Released	2014-09-03
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Rattus norvegicus
Macromolecule	Antigen peptide transporter 1 (protein)
Unique Ligands	ATP, CIT, MG, NI

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5LL6 \| pdb_00005ll6	Download File View File

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Heuer, A., Gerovac, M., Schmidt, C., Trowitzsch, S., Preis, A., Koetter, P., Berninghausen, O., Becker, T., Beckmann, R., Tampe, R.

(2017) Nat Struct Mol Biol 24: 453-460

Released	2017-04-12
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 19 Unique nucleic acid chains: 1
Unique Ligands	ANP, MG, SF4

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5LW7 \| pdb_00005lw7	Download File View File

S. solfataricus ABCE1 post-splitting state

Heuer, A., Gerovac, M., Beckmann, R., Tampe, R.

(2016) Nat Commun 7: 13248-13248

Released	2016-11-16
Method	ELECTRON MICROSCOPY 17 Å
Organisms	Pyrococcus abyssi GE5
Macromolecule	ABC transporter ATP-binding protein (protein)
Unique Ligands	SF4

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5MKK \| pdb_00005mkk	Download File View File

Crystal structure of the heterodimeric ABC transporter TmrAB, a homolog of the antigen translocation complex TAP

Noell, A., Thomas, C., Tomasiak, T.M., Olieric, V., Wang, M., Diederichs, K., Stroud, R.M., Pos, K.M., Tampe, R.

(2017) Proc Natl Acad Sci U S A 114: E438-E447

Released	2017-01-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Thermus thermophilus HB27
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein)
Unique Ligands	SO4

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5OPI \| pdb_00005opi	Download File View File

Crystal structure of the TAPBPR-MHC I peptide editing complex

Thomas, C., Tampe, R.

(2017) Science 358: 1060-1064

Released	2017-10-18
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Beta-2-microglobulin (protein) H-2 class I histocompatibility antigen, D-B alpha chain (protein) TAP binding protein-like variant (protein)

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6ENY \| pdb_00006eny	Download File View File

Structure of the human PLC editing module

Trowitzsch, S., Januliene, D., Blees, A., Moeller, A., Tampe, R.

(2017) Nature 551: 525-528

Released	2017-11-29
Method	ELECTRON MICROSCOPY 5.8 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) Calreticulin (protein) HLA class I histocompatibility antigen, A-3 alpha chain (protein) Protein disulfide-isomerase A3 (protein) Tapasin (protein)
Unique branched monosaccharides	BGC, MAN, NAG

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6RAF \| pdb_00006raf	Download File View File

Heterodimeric ABC exporter TmrAB in inward-facing narrow conformation under turnover conditions

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Thermus thermophilus Thermus thermophilus HB27 Vicugna pacos
Macromolecule	Anti-vesicular stomatitis virus N VHH (protein) Multidrug resistance ABC transporter ATP-binding and permease protein (protein)
Unique Ligands	ADP, ATP, MG

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6RAG \| pdb_00006rag	Download File View File

Heterodimeric ABC exporter TmrAB in inward-facing wide conformation under turnover conditions

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	ADP, ATP, MG

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6RAH \| pdb_00006rah	Download File View File

Heterodimeric ABC exporter TmrAB in ATP-bound outward-facing open conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	ATP, MG

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6RAI \| pdb_00006rai	Download File View File

Heterodimeric ABC exporter TmrAB in ATP-bound outward-facing occluded conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	ATP, MG

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6RAJ \| pdb_00006raj	Download File View File

Heterodimeric ABC exporter TmrAB in vanadate trapped outward-facing open conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Thermus thermophilus Thermus thermophilus HB27 Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	AOV, ATP, MG

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6RAK \| pdb_00006rak	Download File View File

Heterodimeric ABC exporter TmrAB in vanadate trapped outward-facing occluded conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	AOV, ATP, MG

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6RAL \| pdb_00006ral	Download File View File

Heterodimeric ABC exporter TmrAB under turnover conditions in asymmetric unlocked return conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	ADP, ATP, MG

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6RAM \| pdb_00006ram	Download File View File

Heterodimeric ABC exporter TmrAB under turnover conditions in asymmetric unlocked return conformation with wider opened intracellular gate

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)
Unique Ligands	ADP, ATP, MG

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6RAN \| pdb_00006ran	Download File View File

Heterodimeric ABC exporter TmrAB in inward-facing wide conformation

Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.

(2019) Nature 571: 580-583

Released	2019-07-31
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Thermus thermophilus Vicugna pacos
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein) Nanobody Nb9F10 (protein)

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6TMF \| pdb_00006tmf	Download File View File

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Kratzat, H., Becker, T., Tampe, R., Beckmann, R.

(2020) EMBO J 39: e103788-e103788

Released	2020-02-12
Method	ELECTRON MICROSCOPY 2.8 Å
Organisms	Saccharolobus solfataricus Thermococcus celer Vu 13 = JCM 8558
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 1
Unique Ligands	ANP, MG, SF4, ZN

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7PHR \| pdb_00007phr	Download File View File

Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I

Susac, L., Thomas, C., Tampe, R.

(2022) Cell 185: 3201-3213.e19

Released	2022-08-31
Method	ELECTRON MICROSCOPY 3.08 Å
Organisms	Aequorea victoria Homo sapiens
Macromolecule	Unique protein chains: 9
Unique Ligands	NAG

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7QNG \| pdb_00007qng	Download File View File

Structure of a MHC I-Tapasin-ERp57 complex

Mueller, I.K., Thomas, C., Trowitzsch, S., Tampe, R.

(2022) Nat Commun 13: 5383-5383

Released	2022-09-28
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Beta-2-microglobulin (protein) H-2 class I histocompatibility antigen, D-B alpha chain (protein) Protein disulfide-isomerase A3 (protein) Tapasin (protein)
Unique branched monosaccharides	BMA, NAG

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7QPD \| pdb_00007qpd	Download File View File

Structure of the human MHC I peptide-loading complex editing module

Domnick, A., Susac, L., Trowitzsch, S., Thomas, C., Tampe, R.

(2022) Nat Commun 13: 4701-4701

Released	2022-07-20
Method	ELECTRON MICROSCOPY 3.73 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) Calreticulin (protein) HLA class I histocompatibility antigen, A-3 alpha chain (protein) Protein disulfide-isomerase A3 (protein) Tapasin (protein)
Unique branched monosaccharides	BMA, GLC, MAN, NAG

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8OMR \| pdb_00008omr	Download File View File

Human tRNA guanine transglycosylase (TGT) bound to tRNAAsp

Sievers, K., Neumann, P., Susac, L., Trowitzsch, S., Tampe, R., Ficner, R.

(2024) Structure 32: 316

Released	2023-12-20
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens
Macromolecule	Queuine tRNA-ribosyltransferase accessory subunit 2 (protein) Queuine tRNA-ribosyltransferase catalytic subunit 1 (protein) tRNAAsp (nucleic acid)
Unique Ligands	9DG, ZN

1 to 22 of 22 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1QLO | pdb_00001qlo

3OZX | pdb_00003ozx

4K8O | pdb_00004k8o

5LL6 | pdb_00005ll6

5LW7 | pdb_00005lw7

5MKK | pdb_00005mkk

5OPI | pdb_00005opi

6ENY | pdb_00006eny

6RAF | pdb_00006raf

6RAG | pdb_00006rag

6RAH | pdb_00006rah

6RAI | pdb_00006rai

6RAJ | pdb_00006raj

6RAK | pdb_00006rak

6RAL | pdb_00006ral

6RAM | pdb_00006ram

6RAN | pdb_00006ran

6TMF | pdb_00006tmf

7PHR | pdb_00007phr

7QNG | pdb_00007qng

7QPD | pdb_00007qpd

8OMR | pdb_00008omr