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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Toth, R."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Homo sapiens (8)
	Bos taurus (4)

Taxonomy

Eukaryota (11)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (4)
	2.5 - 3.0 (3)
	3.0 - 3.5 (1)

Release Date

	2015 - 2019 (9)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (5)
	Hydrolases (3)
	Ligases (2)

Symmetry Type

	Asymmetric (10)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a+b) (7)
	Alpha and beta proteins (a/b) (2)
	Artifacts (3)

AllSelected

1 to 11 of 11 Structures

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4S1Z \| pdb_00004s1z	Download File View File

Crystal structure of TRABID NZF1 in complex with K29 linked di-Ubiquitin

Kristariyanto, Y.A., Abdul Rehman, S.A., Campbell, D.G., Morrice, N.A., Johnson, C., Toth, R., Kulathu, Y.

(2015) Mol Cell 58: 83-94

Released	2015-04-08
Method	X-RAY DIFFRACTION 3.03 Å
Organisms	Bos taurus Homo sapiens
Macromolecule	Ubiquitin (protein) Ubiquitin thioesterase ZRANB1 (protein)
Unique Ligands	ZN

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4S22 \| pdb_00004s22	Download File View File

Crystal structure of K29 linked di-Ubiquitin

Kristariyanto, Y.A., Abdul Rehman, S.A., Campbell, D.G., Morrice, N.A., Johnson, C., Toth, R., Kulathu, Y.

(2015) Mol Cell 58: 83-94

Released	2015-04-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus
Macromolecule	Ubiquitin (protein)
Unique Ligands	EDO, GOL, IOD

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4XYZ \| pdb_00004xyz	Download File View File

Crystal structure of K33 linked di-Ubiquitin

Kristariyanto, Y.A., Abdul Rehman, S.A., Choi, S.Y., Ritorto, S., Campbell, D.G., Morrice, N.A., Toth, R., Kulathu, Y.

(2015) Biochem J 467: 345-352

Released	2015-03-18
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Bos taurus
Macromolecule	Polyubiquitin-C (protein)
Unique Ligands	ACT, EDO, IOD, PG4

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4Y1H \| pdb_00004y1h	Download File View File

Crystal structure of K33 linked tri-Ubiquitin

Kristariyanto, Y.A., Abdul Rehman, S.A., Choi, S.Y., Ritorto, S., Campbell, D.G., Morrice, N.A., Toth, R., Kulathu, Y.

(2015) Biochem J 467: 345-352

Released	2015-03-18
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Bos taurus
Macromolecule	Ubiquitin-40S ribosomal protein S27a (protein)
Unique Ligands	EDO

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5C1Z \| pdb_00005c1z	Download File View File

Parkin (UblR0RBR)

kumar, A., Aguirre, J.D., Condos, T.E.C., Martinez-Torres, R.J., Chaugule, V.K., Toth, R., Sundaramoorthy, R., Mercier, P., Knebel, A., Spratt, D.E., Barber, K.R., Shaw, G.S., Walden, H.

(2015) EMBO J 34: 2506-2521

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase parkin (protein)
Unique Ligands	CL, GOL, SO4, ZN

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5C23 \| pdb_00005c23	Download File View File

Parkin (S65DUblR0RBR)

Kumar, A., Aguirre, J.D., Condos, T.E.C., Martinez-Torres, R.J., Chaugule, V.K., Toth, R., Sundaramoorthy, R., Mercier, P., Knebel, A., Spratt, D.E., Barber, K.R., Shaw, G.S., Walden, H.

(2015) EMBO J 34: 2506-2521

Released	2015-07-29
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase parkin (protein)
Unique Ligands	CL, GOL, SO4, ZN

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5N2W \| pdb_00005n2w	Download File View File

WT-Parkin and pUB complex

Kumar, A., Chaugule, V.K., Johnson, C., Toth, R., Sundaramoorthy, R., Knebel, A., Walden, H.

(2017) Nat Struct Mol Biol 24: 475-483

Released	2017-04-19
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase parkin,E3 ubiquitin-protein ligase parkin (protein) Polyubiquitin-B (protein)
Unique Ligands	CL, TMO, ZN

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5N38 \| pdb_00005n38	Download File View File

S65DParkin and pUB complex

Kumar, A., Chaugule, V.K., Johnson, C., Toth, R., Sundaramoorthy, R., Knebel, A., Walden, H.

(2017) Nat Struct Mol Biol 24: 475-483

Released	2017-04-19
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase parkin,E3 ubiquitin-protein ligase parkin (protein) Polyubiquitin-B (protein)
Unique Ligands	CL, PEG, ZN