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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

QUERY: Structure Author = "Yin, J."

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This query matches 85 Structures.

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1FL5	Download File View File

THE UNLIGANDED GERMLINE PRECURSOR TO THE SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4.

Yin, J., Mundorff, E.C., Yang, P.L., Wendt, K.U., Hanway, D., Stevens, R.C., Schultz, P.G.

(2001) Biochemistry 40: 10764-10773

Released	2001-11-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	ANTIBODY GERMLINE PRECURSOR TO ANTIBODY 28B4 (protein)
Unique Ligands	SO4

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1FL6	Download File View File

THE HAPTEN COMPLEXED GERMLINE PRECURSOR TO SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4

Yin, J., Mundorff, E.C., Yang, P.L., Wendt, K.U., Hanway, D., Stevens, R.C., Schultz, P.G.

(2001) Biochemistry 40: 10764-10773

Released	2001-11-14
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	ANTIBODY GERMLINE PRECURSOR TO 28B4 (protein)
Unique Ligands	AAH

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1JPY	Download File View File

Crystal structure of IL-17F

Hymowitz, S.G., Filvaroff, E.H., Yin, J., Lee, J., Cai, L., Risser, P., Maruoka, M., Mao, W., Foster, J., Kelley, R., Pan, G., Gurney, A.L., de Vos, A.M., Starovasnik, M.A.

(2001) EMBO J 20: 5332-5341

Released	2001-09-28
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	interleukin 17F (protein)
Unique Ligands	NAG, SO4
Unique branched monosaccharides	NAG, NDG

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1MPV	Download File View File

Structure of bhpBR3, the BAFF-binding loop of BR3 embedded in a beta-hairpin peptide

Kayagaki, N., Yan, M., Seshasayee, D., Wang, H., Lee, W., French, D.M., Grewal, I.S., Cochran, A.G., Gordon, N.C., Yin, J., Starovasnik, M.A., Dixit, V.M.

(2002) Immunity 17: 515-524

Released	2002-10-30
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	BLyS Receptor 3 (protein)

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1N7M	Download File View File

Germline 7G12 with N-methylmesoporphyrin

Yin, J., Andryski, S.E., Beuscher IV, A.E., Stevens, R.C., Schultz, P.G.

(2003) Proc Natl Acad Sci U S A 100: 856-861

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Germline Metal Chelatase Catalytic Antibody, chain H (protein) Germline Metal Chelatase Catalytic Antibody, chain L (protein)
Unique Ligands	MMP

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1NGW	Download File View File

Chimeric Affinity Matured Fab 7g12 complexed with mesoporphyrin

Yin, J., Andryski, S.E., Beuscher IV, A.E., Stevens, R.C., Schultz, P.G.

(2003) Proc Natl Acad Sci U S A 100: 856-861

Released	2003-02-04
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Mature Metal Chelatase Catalytic Antibody, Heavy chain (protein) Mature Metal Chelatase Catalytic Antibody, Light chain (protein)
Unique Ligands	MMP

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1NGX	Download File View File

Chimeric Germline Fab 7g12 with jeffamine fragment bound

Yin, J., Andryski, S.E., Beuscher, A.B., Stevens, R.C., Schultz, P.G.

(2003) Proc Natl Acad Sci U S A 100: 856-861

Released	2003-03-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Germline Metal Chelatase Catalytic Antibody, Heavy chain (protein) Germline Metal Chelatase Catalytic Antibody, Light chain (protein)
Unique Ligands	JEF

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1NGY	Download File View File

Chimeric Mature Fab 7g12-Apo

Yin, J., Andryski, S.A., Beuscher, A.B., Stevens, R.C., Schultz, P.G.

(2003) Proc Natl Acad Sci U S A 100: 856-861

Released	2003-02-04
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Mature Metal Chelatase Catalytic Antibody, Heavy chain (protein) Mature Metal Chelatase Catalytic Antibody, Light chain (protein)

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1NGZ	Download File View File

Chimeric Germline Fab 7g12-apo

Yin, J., Andryski, S.A., Beuscher, A.B., Stevens, R.C., Schultz, P.G.

(2003) Proc Natl Acad Sci U S A 100: 856-861

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Germline Metal Chelatase Catalytic Antibody, Heavy chain (protein) Germline Metal Chelatase Catalytic Antibody, Light chain (protein)

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1TJN	Download File View File

Crystal structure of hypothetical protein af0721 from Archaeoglobus fulgidus

Yin, J., Xu, X.L., Cuff, M., Walker, J.R., Edwards, A., Savchenko, A., James, M.N.G., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2004-09-07
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	Sirohydrochlorin cobaltochelatase (protein)

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1XU1	Download File View File

The crystal structure of APRIL bound to TACI

Hymowitz, S.G., Patel, D.R., Wallweber, H.J.A., Runyon, S., Yan, M., Yin, J., Shriver, S.K., Gordon, N.C., Pan, B., Skelton, N.J., Kelley, R.F., Starovasnik, M.A.

(2005) J Biol Chem 280: 7218-7227

Released	2004-11-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Tumor necrosis factor ligand superfamily member 13 (protein) Tumor necrosis factor receptor superfamily member 13B (protein)
Unique Ligands	NI

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1XU2	Download File View File

The crystal structure of APRIL bound to BCMA

Hymowitz, S.G., Patel, D.R., Wallweber, H.J.A., Runyon, S., Yan, M., Yin, J., Shriver, S.K., Gordon, N.C., Pan, B., Skelton, N.J., Kelley, R.F., Starovasnik, M.A.

(2005) J Biol Chem 280: 7218-7227

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Tumor necrosis factor ligand superfamily member 13 (protein) Tumor necrosis factor receptor superfamily member 17 (protein)
Unique Ligands	NI

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1XUT	Download File View File

Solution structure of TACI-CRD2

Hymowitz, S.G., Patel, D.R., Wallweber, H.J., Runyon, S., Yan, M., Yin, J., Shriver, S.K., Gordon, N.C., Pan, B., Skelton, N.J., Kelley, R.F., Starovasnik, M.A.

(2005) J Biol Chem 280: 7218-7227

Released	2004-11-09
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor receptor superfamily member 13B (protein)

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2A4O	Download File View File

Dual modes of modification of Hepatitis A virus 3C protease by a serine derived beta-lactone: selective crytstallization and high resolution structure of the His102 adduct

Yin, J., Bergmann, E.M., Cherney, M.M., Lall, M.S., Jain, R.P., Vederas, J.C., James, M.N.G.

(2005) J Mol Biol 354: 854-871

Released	2005-12-27
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Human hepatitis A virus Hu/Northern Africa/MBB/1978
Macromolecule	Probable protein P3C (protein)
Unique Ligands	ACE, BBL, NFA, VAL

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2CXV	Download File View File

Dual Modes of Modification of Hepatitis A Virus 3C Protease by a Serine-Derived betaLactone: Selective Crystallization and High-resolution Structure of the His-102 Adduct

Yin, J., Bergmann, E.M., Cherney, M.M., Lall, M.S., Jain, R.P., Vederas, J.C., James, M.N.G.

(2005) J Mol Biol 354: 854-871

Released	2005-12-27
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Human hepatitis A virus Hu/Northern Africa/MBB/1978
Macromolecule	Probable protein P3C (protein)
Unique Ligands	BBL

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2DJ5	Download File View File

Crystal Structure of the vitamin B12 biosynthetic cobaltochelatase, CbiXS, from Archaeoglobus fulgidus

Yin, J., Cherney, M.M., James, M.N.G.

(2006) J Struct Funct Genomics 7: 37-50

Released	2006-09-12
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	Sirohydrochlorin cobaltochelatase (protein)
Unique Ligands	GOL, PO4

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2H6M	Download File View File

An episulfide cation (thiiranium ring) trapped in the active site of HAV 3C proteinase inactivated by peptide-based ketone inhibitors

Yin, J., Cherney, M.M., Bergmann, E.M., James, M.N.

(2006) J Mol Biol 361: 673-686

Released	2006-08-08
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Hepatovirus A
Macromolecule	N-ACETYL-LEUCYL-ALANYL-ALANYL-(N,N-DIMETHYL)-GLUTAMINE-(1,4-DIOXO-3,4-DIHYDRO-1H-PHTHALAZIN-2-YL)METHYLKETONE INHIBITOR (protein) Picornain 3C (protein)
Unique Ligands	BBL

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2H9H	Download File View File

An episulfide cation (thiiranium ring) trapped in the active site of HAV 3C proteinase inactivated by peptide-based ketone inhibitors

Yin, J., Cherney, M.M., Bergmann, E.M., James, M.N.

(2006) J Mol Biol 361: 673-686

Released	2006-08-08
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Hepatovirus A
Macromolecule	Hepatitis A virus protease 3C (protein) Three residue peptide (protein)
Unique Ligands	BBL

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2HAL	Download File View File

An episulfide cation (thiiranium ring) trapped in the active site of HAV 3C proteinase inactivated by peptide-based ketone inhibitors

Yin, J., Cherney, M.M., Bergmann, E.M., James, M.N.

(2006) J Mol Biol 361: 673-686

Released	2006-08-08
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Hepatovirus A
Macromolecule	Hepatitis A Protease 3C (protein) N-ACETYL-LEUCYL-PHENYLALANYL-PHENYLALANYL-GLUTAMATE-FLUOROMETHYLKETONE INHIBITOR (protein)
Unique Ligands	BBL

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2Z3C	Download File View File

A Mechanistic view of Enzyme Inhibition and Peptide Hydrolysis in the Active Site of the SARS-CoV 3C-Like peptidase

Yin, J.

(2007) J Mol Biol 371: 1060-1074

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Severe acute respiratory syndrome-related coronavirus synthetic construct
Macromolecule	Replicase polyprotein 1ab (pp1ab) (protein) inhibitor (protein)
Unique Ligands	GOL

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2Z3D	Download File View File

A Mechanistic view of Enzyme Inhibition and Peptide Hydrolysis in the Active Site of the SARS-CoV 3C-Like peptidase

Yin, J.

(2007) J Mol Biol 371: 1060-1074

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	Inhibitor (protein) Replicase polyprotein 1ab (pp1ab) (protein)
Unique Ligands	GOL

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2Z3E	Download File View File

A Mechanistic view of Enzyme Inhibition and Peptide Hydrolysis in the Active Site of the SARS-CoV 3C-Like peptidase

Yin, J.

(2007) J Mol Biol 371: 1060-1074

Released	2007-07-03
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	ACE VAL Z3E LEU KCQ peptide (protein) Replicase polyprotein 1ab (pp1ab) (protein)
Unique Ligands	GOL

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3C0F	Download File View File

Crystal Structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source

Li, Y., Bahti, P., Shaw, N., Song, G., Yin, J., Zhu, J.-Y., Zhang, H., Xu, H., Wang, B.-C., Liu, Z.-J.

(2008) Proteins 71: 2109-2113

Released	2008-02-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	Uncharacterized protein AF_1514 (protein)

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3FCT	Download File View File

MATURE METAL CHELATASE CATALYTIC ANTIBODY WITH HAPTEN

Romesberg, F.E., Santarsiero, B.D., Barnes, D., Yin, J., Spiller, B., Schultz, P.G., Stevens, R.C.

(1998) Biochemistry 37: 14404-14409

Released	1999-06-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (METAL CHELATASE CATALYTIC ANTIBODY) (protein)
Unique Ligands	CA, CD, MG, MMP, NA

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3FHA	Download File View File

Structure of endo-beta-N-acetylglucosaminidase A

Yin, J., Li, L., Shaw, N., Li, Y., Song, J.K., Zhang, W., Xia, C., Zhang, R., Joachimiak, A., Zhang, H.C., Wang, L.X., Wang, P., Liu, Z.J.

(2009) PLoS One 4: e4658-e4658

Released	2009-04-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Glutamicibacter protophormiae
Macromolecule	Endo-beta-N-acetylglucosaminidase (protein)
Unique Ligands	CA, GOL, MG, PO4