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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Zeng, W.H."

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Search Summary

This query matches 53 Structures.

Refinements

Structure Determination Methodology

experimental (53)

Scientific Name of Source Organism

	Vibrio cholerae (21)
	Clostridioides difficile (15)
	Burkholderia glumae (9)
	Homo sapiens (5)
	Pasteurella multocida (4)
	Camelidae (2)
	Camelus dromedarius (2)
	Vibrio cholerae O1 (2)
	Clostridioides difficile 342 (1)
	Pseudomonas aeruginosa (1)

More...

Taxonomy

	Bacteria (53)
	Eukaryota (10)

Experimental Method

	X-RAY DIFFRACTION (52)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (53)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (27)
	2.0 - 2.5 (7)
	2.5 - 3.0 (7)
	3.0 - 3.5 (4)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (14)
	2010 - 2014 (12)
	2015 - 2019 (14)
	2020 - 2024 (7)
	2025 - 2029 (1)

Enzyme Classification Name

	Transferases (26)
	Hydrolases (20)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (52)
	Cyclic (1)

SCOP Classification

	All beta proteins (6)
	Alpha and beta proteins (a+b) (23)
	Alpha and beta proteins (a/b) (11)
	Artifacts (12)
	All alpha proteins (3)

AllSelected

1 to 25 of 53 Structures

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1S5B	Download File View File

Cholera holotoxin with an A-subunit Y30S mutation Form 3

O'Neal, C.J., Amaya, E.I., Jobling, M.G., Holmes, R.K., Hol, W.G.

(2004) Biochemistry 43: 3772-3782

Released	2004-04-06
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera enterotoxin, A chain precursor (protein) cholera toxin B protein (CTB) (protein)
Unique Ligands	NA

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1S5C	Download File View File

Cholera holotoxin with an A-subunit Y30S mutation, Crystal form 1

O'Neal, C.J., Amaya, E.I., Jobling, M.G., Holmes, R.K., Hol, W.G.

(2004) Biochemistry 43: 3772-3782

Released	2004-04-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera enterotoxin, A chain (protein) cholera enterotoxin B-subunit (protein)
Unique Ligands	NA

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1S5D	Download File View File

Cholera holotoxin with an A-subunit Y30S mutation, Crystal form 2

O'Neal, C.J., Amaya, E.I., Jobling, M.G., Holmes, R.K., Hol, W.G.

(2004) Biochemistry 43: 3772-3782

Released	2004-04-06
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera enterotoxin, A chain (protein) cholera toxin B protein (CTB) (protein)
Unique Ligands	GAL, GOL, NA

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1S5E	Download File View File

Cholera holotoxin, Crystal form 1

O'Neal, C.J., Amaya, E.I., Jobling, M.G., Holmes, R.K., Hol, W.G.

(2004) Biochemistry 43: 3772-3782

Released	2004-04-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera enterotoxin, A chain precursor (protein) cholera toxin B protein (CTB) (protein)
Unique Ligands	GAL, NA

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1S5F	Download File View File

Cholera holotoxin, Crystal form 2

O'Neal, C.J., Amaya, E.I., Jobling, M.G., Holmes, R.K., Hol, W.G.

(2004) Biochemistry 43: 3772-3782

Released	2004-04-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Vibrio cholerae
Macromolecule	Cholera enterotoxin, A chain (protein) cholera toxin B protein (CTB) (protein)
Unique Ligands	GAL, NA

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2A5D	Download File View File

Structural basis for the activation of cholera toxin by human ARF6-GTP

O'Neal, C.J., Jobling, M.G., Holmes, R.K., Hol, W.G.J.

(2005) Science 309: 1093-1096

Released	2005-08-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Vibrio cholerae
Macromolecule	ADP-ribosylation factor 6 (protein) Cholera enterotoxin, A chain (protein)
Unique Ligands	GOL, GTP, MG, NA

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2A5F	Download File View File

Cholera toxin A1 subunit bound to its substrate, NAD+, and its human protein activator, ARF6

O'Neal, C.J., Jobling, M.G., Holmes, R.K., Hol, W.G.J.

(2005) Science 309: 1093-1096

Released	2005-08-16
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens Vibrio cholerae
Macromolecule	ADP-ribosylation factor 6 (protein) Cholera enterotoxin, A chain (protein)
Unique Ligands	GOL, GTP, MG, NA, NAD

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2A5G	Download File View File

Cholera toxin A1 subunit bound to ARF6(Q67L)

O'Neal, C.J., Jobling, M.G., Holmes, R.K., Hol, W.G.J.

(2005) Science 309: 1093-1096

Released	2005-08-16
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Homo sapiens Vibrio cholerae
Macromolecule	ADP-ribosylation factor 6 (protein) Cholera enterotoxin, A chain (protein)
Unique Ligands	GTP, MG, NA

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2EBF	Download File View File

Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin

Kitadokoro, K., Horiguchi, Y., Kamitani, S.

(2007) Proc Natl Acad Sci U S A 104: 5139-5144

Released	2007-03-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pasteurella multocida
Macromolecule	Dermonecrotic toxin (protein)
Unique Ligands	2PO
Unique branched monosaccharides	GLC

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2EBH	Download File View File

Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin

Kitadokoro, K., Horiguchi, Y., Kamitani, S.

(2007) Proc Natl Acad Sci U S A 104: 5139-5144

Released	2007-03-06
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pasteurella multocida
Macromolecule	Dermonecrotic toxin (protein)
Unique branched monosaccharides	GLC

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2EC5	Download File View File

Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin

Kitadokoro, K., Horiguchi, Y., Kamitani, S.

(2007) Proc Natl Acad Sci U S A 104: 5139-5144

Released	2007-03-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Pasteurella multocida
Macromolecule	Dermonecrotic toxin (protein)

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2F6E	Download File View File

Clostridium difficile Toxin A C-terminal fragment 1 (TcdA-f1)

Ng, K.K., Ho, J.G.

(2005) Proc Natl Acad Sci U S A 102: 18373-18378

Released	2005-12-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Clostridioides difficile
Macromolecule	Toxin A (protein)

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2G7C	Download File View File

Clostridium difficile Toxin A Fragment Bound to aGal(1,3)bGal(1,4)bGlcNAc

Greco, A., Ho, J.G.S., Lin, S.J., Palcic, M.M., Rupnik, M., Ng, K.K.S.

(2006) Nat Struct Mol Biol 13: 460-461

Released	2006-04-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Clostridioides difficile
Macromolecule	Toxin A (protein)
Unique Ligands	GOL
Unique branched monosaccharides	GAL, GLA, NAG

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2N9V	Download File View File

Solution NMR Structure of the membrane localization domain from Pasteurella multocida toxin

Hisao, G.S., Brothers, M.C., Ho, M., Wilson, B.A., Rienstra, C.M.

(2017) Protein Sci 26: 497-504

Released	2016-12-07
Method	SOLUTION NMR
Organisms	Pasteurella multocida
Macromolecule	Dermonecrotic toxin (protein)

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2Q5T	Download File View File

Full-length Cholix toxin from Vibrio Cholerae

Jorgensen, R., Fieldhouse, R.J., Merrill, A.R.

(2008) J Biol Chem 283: 10671-10678

Released	2008-02-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	CL, EDO

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2Q6M	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with the PJ34 inhibitor

Merrill, A.R., Jorgensen, R.

(2008) J Biol Chem 283: 10671-10678

Released	2008-02-12
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	P34

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2QJ6	Download File View File

Crystal structure analysis of a 14 repeat C-terminal fragment of toxin TcdA in Clostridium difficile

Albesa-Jove, D., Bertrand, T., Carpenter, L., Lim, J., Brown, K.A., Fairweather, N.

To be published

Released	2008-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Clostridioides difficile
Macromolecule	Toxin A (protein)

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2ZIT	Download File View File

Structure of the eEF2-ExoA-NAD+ complex

Jorgensen, R., Merrill, A.R.

(2008) EMBO Rep 9: 802-809

Released	2008-06-24
Method	X-RAY DIFFRACTION 3 Å
Organisms	Pseudomonas aeruginosa Saccharomyces cerevisiae
Macromolecule	Elongation factor 2 (protein) Exotoxin A (protein)
Unique Ligands	NAD

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3ESS	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with the 1,8-Naphthalimide inhibitor

Merrill, A.R., Jorgensen, R.

(2009) FEMS Microbiol Lett 300: 97-106

Released	2009-09-15
Method	X-RAY DIFFRACTION 1.191 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	18N

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3HO6	Download File View File

Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in clostridium difficile toxin A

Pruitt, R.N., Lacy, D.B.

(2009) J Biol Chem 284: 21934-21940

Released	2009-06-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Clostridioides difficile
Macromolecule	Toxin A (protein)
Unique Ligands	IHP

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3KI0	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-D

Jorgensen, R., Edwards, P.R., Merrill, A.R.

To be published

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	CL, G9D

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3KI1	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-F

Jorgensen, R., Edwards, P.R., Merrill, A.R.

To be published

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	G9F

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3KI2	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-G

Jorgensen, R., Edwards, P.R., Merrill, A.R.

To be published

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	G9G

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3KI3	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-H

Jorgensen, R., Edwards, P.R., Merrill, A.R.

To be published

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.27 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	G9H

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3KI4	Download File View File

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-P

Jorgensen, R., Edwards, P.R., Merrill, A.R.

To be published

Released	2010-10-27
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Vibrio cholerae
Macromolecule	Cholix toxin (protein)
Unique Ligands	G9P, GOL

1 to 25 of 53 Structures

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