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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Antoshchenko, T."

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Search Summary

This query matches 37 Structures.

Refinements

Structure Determination Methodology

experimental (37)

Scientific Name of Source Organism

	Homo sapiens (12)
	Plasmodium falciparum Palo Alto/Uganda (7)
	Staphylococcus aureus (6)
	Enterococcus faecalis V583 (5)
	Staphylococcus aureus subsp. aureus MW2 (4)
	Klebsiella pneumoniae 342 (1)
	Plasmodium falciparum NF54 (1)
	Staphylococcus aureus subsp. aureus MRSA252 (1)

Taxonomy

	Eukaryota (20)
	Bacteria (17)

Experimental Method

X-RAY DIFFRACTION (37)

Polymer Entity Type

Protein (37)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (22)
	2.0 - 2.5 (10)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (4)
	2015 - 2019 (25)
	2020 - 2024 (8)

Enzyme Classification Name

	Transferases (17)
	Hydrolases (13)
	Ligases (5)

Symmetry Type

	Asymmetric (24)
	Cyclic (13)

SCOP Classification

	Alpha and beta proteins (a/b) (24)
	Alpha and beta proteins (a+b) (5)
	Artifacts (9)

AllSelected

1 to 25 of 37 Structures

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4M7X \| pdb_00004m7x	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog

Mottaghi, K., Hong, B., Tempel, W., Park, H.

(2016) ACS Infect Dis 2: 627-641

Released	2014-09-03
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	27Q, ADP, MG, UNX

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4M7Y \| pdb_00004m7y	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog

Mottaghi, K., Hong, B., Tempel, W., Park, H., Structural Genomics Consortium (SGC)

(2016) ACS Infect Dis 2: 627-641

Released	2014-09-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	2GH, ADP, PO4, UNX

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4NB4 \| pdb_00004nb4	Download File View File

Pantothenamide-bound Pantothenate kinase from Staphylococcus aureus

Hughes, S.J., Antoshchenko, T., Smil, D., Park, H.W.

(2014) Proteins 82: 1542-1548

Released	2014-03-05
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Staphylococcus aureus subsp. aureus MRSA252
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, MG, SH3

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4NE2 \| pdb_00004ne2	Download File View File

Pantothenamide-bound Pantothenate Kinase from Klebsiella pneumoniae

Hughes, S.J., Antoshchenko, T., Kim, K.P., Smil, D., Park, H.W.

(2014) Proteins 82: 1542-1548

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Klebsiella pneumoniae 342
Macromolecule	Pantothenate kinase (protein)
Unique Ligands	ADP, MG, SH2

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5ELZ \| pdb_00005elz	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog

Mottaghi, K., Hughes, S.J., Tempel, W., Hong, B., Park, H., Structural Genomics Consortium (SGC)

(2016) ACS Infect Dis 2: 627-641

Released	2016-08-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	3V9, ADP, MG, UNX

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5EVZ \| pdb_00005evz	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with ADP and inorganic phosphate

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	ADP, MG, PO4

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5EX5 \| pdb_00005ex5	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 7-deaza-ADP and inorganic phosphate

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	7DD, MG, PO4

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5EXW \| pdb_00005exw	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 7-deaza-ATP

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	7DT

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5EY4 \| pdb_00005ey4	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 2'-deoxy-ATP

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	DTP

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5F0X \| pdb_00005f0x	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 2'-deoxy-ADP and inorganic phosphate

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	DAT, DTP, MG, PO4

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5F1X \| pdb_00005f1x	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with ATP

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	ATP

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5F2R \| pdb_00005f2r	Download File View File

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with AMP-PCP

Hughes, S.J., Antoshchenko, T., Song, J.H., Pizarro, J., Park, H.W.

(2016) PLoS One 11: e0154862-e0154862

Released	2016-06-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	78 kDa glucose-regulated protein (protein)
Unique Ligands	ACP, MG

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5IBY \| pdb_00005iby	Download File View File

Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with lipoic acid

Hughes, S.J., Song, J.H., Antoshchenko, T., Park, H.W.

To be published

Released	2017-03-15
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Lipoate--protein ligase (protein)
Unique Ligands	LPA

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5ICH \| pdb_00005ich	Download File View File

Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with 8BO-AMP

Hughes, S.J., Song, J.H., Antoshchenko, T., Park, H.W.

To be published

Released	2017-03-15
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Lipoate--protein ligase (protein)
Unique Ligands	SH5

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5ICL \| pdb_00005icl	Download File View File

Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with lipoyl-AMP

Hughes, S.J., Antoshchenko, T., Song, J.H., Park, H.W.

To be published

Released	2017-03-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Lipoate--protein ligase (protein)
Unique Ligands	LAQ

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5IDH \| pdb_00005idh	Download File View File

Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with 8-bromooctanoic acid

Hughes, S.J., Song, J.H., Antoshchenko, T., Park, H.W.

To be published

Released	2017-03-15
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Lipoate--protein ligase (protein)
Unique Ligands	SH6

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5IJ6 \| pdb_00005ij6	Download File View File

Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-1) in complex with lipoic acid

Hughes, S.J., Lyle, A.G., Song, J.H., Antoshchenko, T., Park, H.

To be published

Released	2017-03-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Lipoate--protein ligase (protein)
Unique Ligands	CL, LPA, SO4

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5JIC \| pdb_00005jic	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog

Hughes, S.J., Antoshchenko, T., Mottaghi, K., Barnard, L., Strauss, E., Park, H.

(2016) ACS Infect Dis 2: 627-641

Released	2016-08-10
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, MG, N7E

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5UMB \| pdb_00005umb	Download File View File

Crystal structure of ATPase domain of Malaria GRP78 with ADP bound

Chen, Y., Antoshchenko, T., Pizarro, J.C., Song, J.H., Park, H.

(2018) Sci Rep 8: 10333-10333

Released	2022-07-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Plasmodium falciparum NF54
Macromolecule	Chaperone DnaK (protein)
Unique Ligands	ADP, MG, PO4

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6AVP \| pdb_00006avp	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with ADP and pantothenate analog Phosphate-MeO-N5Pan

Chen, Y., Antoshchenko, T., Strauss, E., Barnard, L., Huang, Y.H.

To be published

Released	2018-09-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Staphylococcus aureus
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, MG, N7E

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6AWG \| pdb_00006awg	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with nucleotides and pantothenate analog Deoxy-N190Pan

Chen, Y., Antoshchenko, T., Strauss, E., Barnard, L., Huang, Y.H.

To be published

Released	2018-09-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Staphylococcus aureus
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, ATP, C0G

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6AWH \| pdb_00006awh	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with ATP and pantothenate analog Deoxy-MeO-N5Pan

Chen, Y., Antoshchenko, T., Strauss, E., Barnard, L., Huang, Y.H.

To be published

Released	2018-09-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ATP, MG, N7G

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6AWI \| pdb_00006awi	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with ADP and pantothenate analog Deoxy-N5Pan

Chen, Y., Antoshchenko, T., Strauss, E., Barnard, L., Huang, Y.H.

To be published

Released	2018-09-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, C0D

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6AWJ \| pdb_00006awj	Download File View File

Staphylococcus aureus Type II pantothenate kinase in complex with ADP and pantothenate analog Deoxy-MeO-N5Pan with pantothenate present in reaction

Chen, Y., Antoshchenko, T., Strauss, E., Barnard, L., Huang, Y.H.

To be published

Released	2018-09-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Staphylococcus aureus
Macromolecule	Type II pantothenate kinase (protein)
Unique Ligands	ADP, N7G