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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Biela, A."

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Search Summary

This query matches 74 Structures.

Refinements

Structure Determination Methodology

experimental (74)

Scientific Name of Source Organism

	Homo sapiens (37)
	Hirudo medicinalis (23)
	Bacillus thermoproteolyticus (14)
	Lactococcus cremoris (11)
	synthetic construct (11)
	Bos taurus (5)
	Saccharomyces cerevisiae (3)
	Geobacillus stearothermophilus (2)
	Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940 (1)
	Mus musculus (1)

Taxonomy

	Eukaryota (46)
	Bacteria (28)
	other sequences (11)

Experimental Method

	X-RAY DIFFRACTION (66)
	ELECTRON MICROSCOPY (8)

Polymer Entity Type

	Protein (74)
	DNA (11)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (16)
	1.5 - 2.0 (31)
	2.0 - 2.5 (11)
	2.5 - 3.0 (9)
	3.0 - 3.5 (1)
	3.5 - 4.0 (4)
	4.0 - 4.5 (2)

Release Date

	2010 - 2014 (37)
	2015 - 2019 (19)
	2020 - 2024 (18)

Enzyme Classification Name

	Hydrolases (56)
	Transferases (15)
	Lyases (11)
	Oxidoreductases (1)

Membrane Protein Annotation

	MemProtMD (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (66)
	Dihedral (4)
	Cyclic (2)
	Octahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (14)
	All beta proteins (5)
	All alpha proteins (1)

AllSelected

1 to 25 of 74 Structures

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3FLF	Download File View File

Thermolysin inhibition

Englert, L., Biela, A., Heine, A., Klebe, G.

(2010) Biochim Biophys Acta 1800: 1192-1202

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, GOL, UB3, ZN

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3FV4	Download File View File

Thermolysin inhibition

Englert, L., Biela, A., Heine, A., Klebe, G.

(2010) Biochim Biophys Acta 1800: 1192-1202

Released	2010-02-09
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	1U4, CA, DMS, GOL, ZN

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3FVP	Download File View File

Thermolysin inhibition

Englert, L., Biela, A., Heine, A., Klebe, G.

To be published

Released	2010-02-09
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, DMS, GOL, UB2, ZN

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3P17	Download File View File

Thrombin Inhibition by Pyridin Derivatives

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2011-11-02
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) thrombin heavy chain (protein) thrombin light chain (protein)
Unique Ligands	99P, NA, NAG, PO4

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3QTO	Download File View File

Thrombin Inhibition by Pyridin Derivatives

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	10P, GOL, NA, NAG, PO4

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3QTV	Download File View File

Thrombin Inhibition by Pyridin Derivatives

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-02-29
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	06P, GOL, NA, NAG, PO4

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3QWC	Download File View File

Thrombin Inhibition by Pyridin Derivatives

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	98P, GOL, NA, NAG

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3QX5	Download File View File

Thrombin Inhibition by Pyridin Derivatives

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	02P, GOL, NA, NAG, PO4

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3RLW	Download File View File

Human Thrombin in complex with MI328

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, NA, NAG, PO4, S28

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3RLY	Download File View File

Human Thrombin in complex with MI329

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, NA, NAG, PO4, S29

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3RM0	Download File View File

Human Thrombin in complex with MI354

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, NA, NAG, PO4, S54

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3RM2	Download File View File

Human Thrombin in complex with MI003

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.23 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, NA, NAG, PO4, S00

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3RML	Download File View File

Human Thrombin in complex with MI331

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, M31, NA, NAG, PO4

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3RMM	Download File View File

Human Thrombin in complex with MI332

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, M32, NA, NAG, PO4

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3RMN	Download File View File

Human Thrombin in complex with MI341

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, M41, NA, NAG, PO4

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3RMO	Download File View File

Human Thrombin in complex with MI004

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-04-25
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, NA, NAG, PO4, S04

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3SHA	Download File View File

Human Thrombin In Complex With UBTHR97

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-06-20
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	GOL, NA, NAG, P97, PO4

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3SHC	Download File View File

Human Thrombin In Complex With UBTHR101

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-06-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	B01, NA, NAG

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3SI3	Download File View File

Human Thrombin In Complex With UBTHR103

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-06-20
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	B03, GOL, NA, NAG, PO4

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3SI4	Download File View File

Human Thrombin In Complex With UBTHR104

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-06-20
Method	X-RAY DIFFRACTION 1.27 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	B04, GOL, NA, NAG, PO4

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3SV2	Download File View File

Human Thrombin In Complex With UBTHR105

Biela, A., Heine, A., Klebe, G.

(2012) J Mol Biol 418: 350-366

Released	2012-06-20
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin heavy chain (protein) Thrombin light chain (protein)
Unique Ligands	GOL, NA, NAG, P05, PO4

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3T5F	Download File View File

Human Thrombin In Complex With MI340

Biela, A., Heine, A., Klebe, G.

(2012) J Med Chem 55: 6094-6110

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	Hirudin variant-2 (protein) Thrombin Heavy Chain (protein) Thrombin Light Chain (protein)
Unique Ligands	GOL, M34, NA, NAG, PO4

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3T73	Download File View File

Thermolysin In Complex With UBTLN22

Biela, A., Heine, A., Klebe, G.

(2012) ChemMedChem 7: 1423-1434

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, DMS, GOL, UBX, ZN

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3T74	Download File View File

Thermolysin In Complex With UBTLN27

Biela, A., Heine, A., Klebe, G.

(2012) ChemMedChem 7: 1423-1434

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, DMS, GOL, UBY, ZN

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3T87	Download File View File

Thermolysin In Complex With UBTLN28

Biela, A., Heine, A., Klebe, G.

To be published

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Bacillus thermoproteolyticus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, DMS, GOL, UBZ, ZN

1 to 25 of 74 Structures

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