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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Cai, S."

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Search Summary

This query matches 18 Structures.

Refinements

Structure Determination Methodology

experimental (18)

Scientific Name of Source Organism

	Homo sapiens (13)
	Arabidopsis thaliana (2)
	Mycobacterium tuberculosis (2)
	Escherichia coli (1)

Taxonomy

	Eukaryota (15)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (11)
	SOLUTION NMR (5)
	ELECTRON MICROSCOPY (2)

Polymer Entity Type

	Protein (18)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (5)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (3)
	2010 - 2014 (2)
	2020 - 2024 (12)

Enzyme Classification Name

	Hydrolases (9)
	Isomerases (9)
	Ligases (1)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (14)
	Cyclic (4)

SCOP Classification

	All alpha proteins (2)
	Alpha and beta proteins (a/b) (2)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 18 of 18 Structures

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1Q5L	Download File View File

NMR structure of the substrate binding domain of DnaK bound to the peptide NRLLLTG

Stevens, S.Y., Cai, S., Pellecchia, M., Zuiderweg, E.R.

(2003) Protein Sci 12: 2588-2596

Released	2003-11-04
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Chaperone protein dnaK (protein) peptide NRLLLTG (protein)

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2GIU	Download File View File

Human estrogen receptor beta ligand-binding domain in complex with compound 45

Fitzgerald, P.M.D., Sharma, N.

(2006) Bioorg Med Chem Lett 16: 3489-3494

Released	2006-10-10
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor beta (protein)
Unique Ligands	FBR

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2L4Q	Download File View File

Solution Structures of Oxidized and Reduced Thioredoxin C from M. tb

Olson, A.L., Cai, S., Sem, D.S.

(2013) Proteins 81: 675-689

Released	2011-10-12
Method	SOLUTION NMR
Organisms	Mycobacterium tuberculosis
Macromolecule	Thioredoxin (protein)

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2L59	Download File View File

Solution Structures of Oxidized and Reduced Thioredoxin C from M. tb

Olson, A.L., Cai, S., Sem, D.S.

(2013) Proteins 81: 675-689

Released	2011-10-26
Method	SOLUTION NMR
Organisms	Mycobacterium tuberculosis
Macromolecule	Thioredoxin (protein)

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2OEH	Download File View File

Determination of the Three-dimensional Structure of the Mrf2-DNA Complex Using Paramagnetic Spin Labeling

Cai, S., Zhu, L., Zhang, Z.

(2007) Biochemistry 46: 4943-4950

Released	2007-08-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	AT-rich interactive domain-containing protein 5B (protein) 5'-D(PCPGPAPCPGPTPTPAPTPAPTPTPGPT)-3' (nucleic acid) 5'-D(PTPAPCPAPAPTPAPTPAPAPCPGPTPCP*G)-3' (nucleic acid)

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2PX9	Download File View File

The intrinsic affinity between E2 and the Cys domain of E1 in Ubiquitin-like modifications

Wang, J.H., Hu, W.D., Cai, S., Lee, B., Song, J., Chen, Y.

(2007) Mol Cell 27: 228-237

Released	2007-07-24
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SUMO-activating enzyme subunit 2 (protein) SUMO-conjugating enzyme UBC9 (protein)

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7DY7	Download File View File

Discovery of Novel Small-molecule Inhibitors of PD-1/PD-L1 Axis that Promotes PD-L1 Internalization and Degradation

Cheng, Y., Wang, T.Y., Lu, M.L., Jiang, S., Xiao, Y.B.

(2022) J Med Chem 65: 3879-3893

Released	2022-01-26
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Homo sapiens
Macromolecule	Programmed cell death 1 ligand 1 (protein)
Unique Ligands	HOU

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8IAB	Download File View File

The Arabidopsis CLCa transporter bound with chloride, ATP and PIP2

Yang, Z., Zhang, X., Zhang, P.

(2023) Nat Commun 14: 4879-4879

Released	2023-08-02
Method	ELECTRON MICROSCOPY 2.96 Å
Organisms	Arabidopsis thaliana
Macromolecule	Chloride channel protein CLC-a (protein)
Unique Ligands	ATP, CL, MG, PIO

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8IAD	Download File View File

The Arabidopsis CLCa transporter bound with nitrate, ATP and PIP2

Yang, Z., Zhang, X., Zhang, P.

(2023) Nat Commun 14: 4879-4879

Released	2023-08-02
Method	ELECTRON MICROSCOPY 3.16 Å
Organisms	Arabidopsis thaliana
Macromolecule	Chloride channel protein CLC-a (protein)
Unique Ligands	ATP, MG, NO3, PIO

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8TBF	Download File View File

Tricomplex of RMC-7977, KRAS WT, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	EDO, GNP, MG, ZNI

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8TBG	Download File View File

Tricomplex of RMC-7977, HRAS WT, and CypA

Chen, A., Tomlinson, A.C.A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	GTPase HRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, GOL, MG, ZNI

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8TBH	Download File View File

Tricomplex of RMC-7977, KRAS G12R, and CypA

Bar Ziv, T., Zhang, D., Tomlinson, A.C.A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, MG, ZNI

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8TBI	Download File View File

Tricomplex of RMC-7977, NRAS WT, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Homo sapiens
Macromolecule	GTPase NRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, MG, ZNI

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8TBJ	Download File View File

Tricomplex of RMC-7977, KRAS G12A, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	EDO, GNP, GOL, MG, ZNI

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8TBK	Download File View File

Tricomplex of RMC-7977, KRAS G12C, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, MG, ZNI

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8TBL	Download File View File

Tricomplex of RMC-7977, KRAS G12D, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, MG, ZNI

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8TBM	Download File View File

Tricomplex of RMC-7977, KRAS G12V, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, GOL, MG, ZNI

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8TBN	Download File View File

Tricomplex of RMC-7977, KRAS G12S, and CypA

Tomlinson, A.C.A., Chen, A., Knox, J.E., Yano, J.K.

(2024) Nature 629: 919-926

Released	2024-02-07
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Peptidyl-prolyl cis-trans isomerase A (protein)
Unique Ligands	GNP, MG, ZNI

1 to 18 of 18 Structures

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