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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Correia, M.A."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Acetivibrio thermocellus (4)
	Amycolatopsis orientalis (3)
	Cellvibrio japonicus (2)
	Escherichia coli K-12 (2)
	Homo sapiens (2)
	uncultured bacterium (1)

Taxonomy

	Bacteria (12)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (14)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (8)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (2)
	2015 - 2019 (4)

Enzyme Classification Name

	Oxidoreductases (4)
	Hydrolases (5)

Symmetry Type

	Asymmetric (12)
	Dihedral (2)

SCOP Classification

	All alpha proteins (2)
	Alpha and beta proteins (a+b) (2)

AllSelected

1 to 14 of 14 Structures

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2VZP \| pdb_00002vzp	Download File View File

Atomic Resolution Structure of the C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA

Lammerts van Bueren, A., Boraston, A.B.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Amycolatopsis orientalis
Macromolecule	EXO-BETA-D-GLUCOSAMINIDASE (protein)
Unique Ligands	CA, EDO

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2VZQ \| pdb_00002vzq	Download File View File

C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with digalacturonic acid

Lammerts van Bueren, A., Boraston, A.B.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Amycolatopsis orientalis
Macromolecule	EXO-BETA-D-GLUCOSAMINIDASE (protein)
Unique Ligands	CA, EDO, NA
Unique branched monosaccharides	AQA, GTR

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2VZR \| pdb_00002vzr	Download File View File

C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with glucuronic acid

Lammerts van Bueren, A., Boraston, A.B.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Amycolatopsis orientalis
Macromolecule	EXO-BETA-D-GLUCOSAMINIDASE (protein)
Unique Ligands	CA, EDO, GCU

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2W1W \| pdb_00002w1w	Download File View File

Native structure of a family 35 carbohydrate binding module from Clostridium thermocellum

Gloster, T.M., Davies, G.J., Correia, M., Prates, J., Fontes, C., Gilbert, H.J.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-20
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Acetivibrio thermocellus
Macromolecule	LIPOLYTIC ENZYME, G-D-S-L (protein)
Unique Ligands	CA, GOL, PO4

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2W3J \| pdb_00002w3j	Download File View File

Structure of a family 35 carbohydrate binding module from an environmental isolate

Montainer, C., Flint, J., Gloster, T.M., Turkenburg, J.P., Davies, G.J., Gilbert, H.J.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	uncultured bacterium
Macromolecule	CARBOHYDRATE BINDING MODULE (protein)
Unique Ligands	CA

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2W46 \| pdb_00002w46	Download File View File

CBM35 from Cellvibrio japonicus Abf62

Montainer, C., Lammerts van Bueren, A., Dumon, C., Flint, J.E., Correia, M.A., Prates, J.A., Firbank, S.J., Lewis, R.J., Grondin, G.G., Ghinet, M.G., Gloster, T.M., Herve, C., Knox, J.P., Talbot, B.G., Turkenburg, J.P., Kerovuo, J., Brzezinski, R., Fontes, C.M.G.A., Davies, G.J., Boraston, A.B., Gilbert, H.J.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-27
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Cellvibrio japonicus
Macromolecule	ESTERASE D (protein)
Unique Ligands	CA, NA

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2W47 \| pdb_00002w47	Download File View File

Clostridium thermocellum CBM35 in complex with delta-4,5- anhydrogalacturonic acid

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-27
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Acetivibrio thermocellus
Macromolecule	LIPOLYTIC ENZYME, G-D-S-L (protein)
Unique Ligands	CA
Unique branched monosaccharides	AQA, GTR

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2W87 \| pdb_00002w87	Download File View File

Xyl-CBM35 in complex with glucuronic acid containing disaccharide.

Montainer, C., Bueren, A.L.v., Dumon, C., Flint, J.E., Correia, M.A., Prates, J.A., Firbank, S.J., Lewis, R.J., Grondin, G.G., Ghinet, M.G., Gloster, T.M., Herve, C., Knox, J.P., Talbot, B.G., Turkenburg, J.P., Kerovuo, J., Brzezinski, R., Fontes, C.M.G.A., Davies, G.J., Boraston, A.B., Gilbert, H.J.

(2009) Proc Natl Acad Sci U S A 106: 3065

Released	2009-01-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Cellvibrio japonicus
Macromolecule	ESTERASE D (protein)
Unique Ligands	CA, GCU, UNL

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2WZ8 \| pdb_00002wz8	Download File View File

Family 35 carbohydrate binding module from Clostridium thermocellum

Gloster, T.M., Davies, G.J., Fontes, C.M., Gilbert, H.J.

(2010) Biochemistry 49: 6193

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Acetivibrio thermocellus
Macromolecule	CELLULOSOME PROTEIN DOCKERIN TYPE I (protein)
Unique Ligands	CA, MG

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2Y8K \| pdb_00002y8k	Download File View File

Structure of CtGH5-CBM6, an arabinoxylan-specific xylanase.

Firbank, S.J., Correia, M.A., Mazumder, K., Bras, J.L., Zhu, Y., Lewis, R.J., York, W.S., Fontes, C.M., Gilbert, H.J.

(2011) J Biological Chem 286: 22510

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Acetivibrio thermocellus
Macromolecule	CARBOHYDRATE BINDING FAMILY 6 (protein)
Unique Ligands	CA, GOL, NA

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5G5G \| pdb_00005g5g	Download File View File

Escherichia coli Periplasmic Aldehyde Oxidase

Correia, M.A.S., Otrelo-Cardoso, A.R., Romao, M.J., Santos-Silva, T.

(2016) ACS Chem Biol 11: 2923

Released	2016-09-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli K-12
Macromolecule	PUTATIVE XANTHINE DEHYDROGENASE YAGR MOLYBDENUM-BINDING SU SUBUNIT (protein) PUTATIVE XANTHINE DEHYDROGENASE YAGS FAD-BINDING SUBUNIT (protein) PUTATIVE XANTHINE DEHYDROGENASE YAGT IRON-SULFUR-BINDING SUBUNIT (protein)
Unique Ligands	ACT, CL, FAD, FES, GOL, IOD, MCN, MOS, SF4

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5G5H \| pdb_00005g5h	Download File View File

Escherichia coli Periplasmic Aldehyde Oxidase R440H mutant

Correia, M.A.S., Otrelo-Cardoso, A.R., Romao, M.J., Santos-Silva, T.

(2016) ACS Chem Biol 11: 2923

Released	2016-09-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli K-12
Macromolecule	Aldehyde oxidoreductase FAD-binding subunit PaoB (protein) Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA (protein) Aldehyde oxidoreductase molybdenum-binding subunit PaoC (protein)
Unique Ligands	ACT, CL, FAD, FES, GOL, IOD, MCN, MOS, SF4

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5TI9 \| pdb_00005ti9	Download File View File

Crystal structure of human TDO in complex with Trp and dioxygen, Northeast Structural Genomics Consortium Target HR6161

Forouhar, F., Lewis-Ballester, A., Lew, S., Karkashon, S., Seetharaman, J., Yeh, S.R., Tong, L.

(2016) Sci Rep 6: 35169-35169

Released	2016-10-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Tryptophan 2,3-dioxygenase (protein)
Unique Ligands	HEM, NFK, OXY, PO4, TRP

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5TIA \| pdb_00005tia	Download File View File

Crystal structure of human TDO in complex with Trp, Northeast Structural Genomics Consortium Target HR6161

Forouhar, F., Lewis-Ballester, A., Lew, S., Karkashon, S., Seetharaman, J., Yeh, S.R., Tong, L.

(2016) Sci Rep 6: 35169-35169

Released	2016-10-26
Method	X-RAY DIFFRACTION 2.441 Å
Organisms	Homo sapiens
Macromolecule	Tryptophan 2,3-dioxygenase (protein)
Unique Ligands	HEM, TRP

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2VZP | pdb_00002vzp

Atomic Resolution Structure of the C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA

2VZQ | pdb_00002vzq

C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with digalacturonic acid

2VZR | pdb_00002vzr

C-terminal CBM35 from Amycolatopsis orientalis exo-chitosanase CsxA in complex with glucuronic acid

2W1W | pdb_00002w1w

Native structure of a family 35 carbohydrate binding module from Clostridium thermocellum

2W3J | pdb_00002w3j

Structure of a family 35 carbohydrate binding module from an environmental isolate

2W46 | pdb_00002w46

CBM35 from Cellvibrio japonicus Abf62

2W47 | pdb_00002w47

Clostridium thermocellum CBM35 in complex with delta-4,5- anhydrogalacturonic acid

2W87 | pdb_00002w87

Xyl-CBM35 in complex with glucuronic acid containing disaccharide.

2WZ8 | pdb_00002wz8

Family 35 carbohydrate binding module from Clostridium thermocellum

2Y8K | pdb_00002y8k

Structure of CtGH5-CBM6, an arabinoxylan-specific xylanase.

5G5G | pdb_00005g5g

Escherichia coli Periplasmic Aldehyde Oxidase

5G5H | pdb_00005g5h

Escherichia coli Periplasmic Aldehyde Oxidase R440H mutant

5TI9 | pdb_00005ti9

Crystal structure of human TDO in complex with Trp and dioxygen, Northeast Structural Genomics Consortium Target HR6161

5TIA | pdb_00005tia

Crystal structure of human TDO in complex with Trp, Northeast Structural Genomics Consortium Target HR6161

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2VZP | pdb_00002vzp

2VZQ | pdb_00002vzq

2VZR | pdb_00002vzr

2W1W | pdb_00002w1w

2W3J | pdb_00002w3j

2W46 | pdb_00002w46

2W47 | pdb_00002w47

2W87 | pdb_00002w87

2WZ8 | pdb_00002wz8

2Y8K | pdb_00002y8k

5G5G | pdb_00005g5g

5G5H | pdb_00005g5h

5TI9 | pdb_00005ti9

5TIA | pdb_00005tia