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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Delbrassine, F."

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Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Ananas comosus (7)
	Bacillus subtilis subsp. subtilis str. 168 (1)
	Escherichia coli K-12 (1)

Taxonomy

	Eukaryota (7)
	Bacteria (2)

Experimental Method

X-RAY DIFFRACTION (9)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (1)
	2020 - 2024 (8)

Enzyme Classification Name

Hydrolases (6)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)

Symmetry Type

Asymmetric (9)

SCOP Classification

Alpha and beta proteins (a+b) (7)

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1 to 9 of 9 Structures

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5JKI \| pdb_00005jki	Download File View File

Crystal structure of the first transmembrane PAP2 type phosphatidylglycerolphosphate phosphatase from Bacillus subtilis

El Ghachi, M., Howe, N., Lampion, A., Delbrassine, F., Vogeley, L., Caffrey, M., Sauvage, E., Auger, R., Guiseppe, A., Roure, S., Perlier, S., Mengin-lecreulx, D., Foglino, M., Touze, T.

(2017) Cell Mol Life Sci 74: 2319-2332

Released	2017-02-22
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	Putative lipid phosphate phosphatase YodM (protein)
Unique Ligands	OLC, UNL, WO4

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6Y6L \| pdb_00006y6l	Download File View File

Structure the ananain protease from Ananas comosus with a thiomethylated catalytic cysteine

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Ananas comosus
Macromolecule	Ananain (protein)
Unique Ligands	GOL, SO4

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6YCB \| pdb_00006ycb	Download File View File

Structure the ananain protease from Ananas comosus covalently bound to with the E64 inhibitor

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.257 Å
Organisms	Ananas comosus
Macromolecule	Ananain (protein)
Unique Ligands	GOL, SO4, TLA

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6YCC \| pdb_00006ycc	Download File View File

Structure the ananain protease from Ananas comosus covalently bound to the E64 inhibitor

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Ananas comosus
Macromolecule	Ananain (protein)
Unique Ligands	E64, GOL, SO4

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6YCD \| pdb_00006ycd	Download File View File

Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Ananas comosus
Macromolecule	Ananain (protein)
Unique Ligands	GOL, SO4, TCK

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6YCE \| pdb_00006yce	Download File View File

Structure the bromelain protease from Ananas comosus with a thiomethylated active cysteine

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Ananas comosus
Macromolecule	FBSB (protein)
Unique Ligands	IPA, NAG
Unique branched monosaccharides	BMA, FUC, NAG, XYS

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6YCF \| pdb_00006ycf	Download File View File

Structure the bromelain protease from Ananas comosus in complex with the E64 inhibitor

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Ananas comosus
Macromolecule	FBSB (protein)
Unique Ligands	CIT, E64, IPA, NAG
Unique branched monosaccharides	BMA, FUC, MAN, NAG, XYS

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6YCG \| pdb_00006ycg	Download File View File

Structure the bromelain protease from Ananas comosus in complex with the TLCK inhibitor

Azarkan, M., Charlier, P., Herman, R., Delbrassine, F., Sauvage, E., M Rabet, N., Calvo Esposito, R., Kerff, F.

(2020) Sci Rep 10: 19570-19570

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Ananas comosus
Macromolecule	FBSB (protein)
Unique Ligands	CIT, IPA, TCK
Unique branched monosaccharides	BMA, FUC, MAN, NAG, XYS

Explore in 3D

8BM3 \| pdb_00008bm3	Download File View File

H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate

Delbrassine, F., El Ghachi, M., Lambion, A., Herman, R., Kerff, F.

To be published

Released	2023-11-22
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Phosphatidylglycerophosphatase B (protein)
Unique Ligands	FPP

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

5JKI | pdb_00005jki

Crystal structure of the first transmembrane PAP2 type phosphatidylglycerolphosphate phosphatase from Bacillus subtilis

6Y6L | pdb_00006y6l

Structure the ananain protease from Ananas comosus with a thiomethylated catalytic cysteine

6YCB | pdb_00006ycb

Structure the ananain protease from Ananas comosus covalently bound to with the E64 inhibitor

6YCC | pdb_00006ycc

Structure the ananain protease from Ananas comosus covalently bound to the E64 inhibitor

6YCD | pdb_00006ycd

Structure the ananain protease from Ananas comosus covalently bound to the TLCK inhibitor

6YCE | pdb_00006yce

Structure the bromelain protease from Ananas comosus with a thiomethylated active cysteine

6YCF | pdb_00006ycf

Structure the bromelain protease from Ananas comosus in complex with the E64 inhibitor

6YCG | pdb_00006ycg

Structure the bromelain protease from Ananas comosus in complex with the TLCK inhibitor

8BM3 | pdb_00008bm3

H207A mutant of E. coli PgpB, a PAP2 type phosphatidyl glycerol phosphate and C55-PP phosphatase, in complex with farnesyl pyrophosphate

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

5JKI | pdb_00005jki

6Y6L | pdb_00006y6l

6YCB | pdb_00006ycb

6YCC | pdb_00006ycc

6YCD | pdb_00006ycd

6YCE | pdb_00006yce

6YCF | pdb_00006ycf

6YCG | pdb_00006ycg

8BM3 | pdb_00008bm3