RCSB PDB: Search

3ZIW	Download File View File

Clostridium perfringens enterotoxin, D48A mutation and N-terminal 37 residues deleted

Yelland, T., Naylor, C.E., Savva, C.G., Basak, A.K.

(2014) J Mol Biol 426: 3134

Released	2014-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Clostridium perfringens
Macromolecule	HEAT-LABILE ENTEROTOXIN B CHAIN (protein)
Unique Ligands	P6G

3ZIX	Download File View File

Clostridium perfringens Enterotoxin with the N-terminal 37 residues deleted

Yelland, T., Naylor, C.E., Savva, C.G., Basak, A.K.

(2014) J Mol Biol 426: 3134

Released	2014-01-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Clostridium perfringens
Macromolecule	HEAT-LABILE ENTEROTOXIN B CHAIN (protein)
Unique Ligands	P6G

5IJR	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with Arg-1 ligand.

(2018) FEBS J 285: 1290-1304

Released	2017-03-29
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	DMS, HRG

5IYY	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand.

(2018) FEBS J 285: 1290-1304

Released	2017-04-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	R40

5J1X	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with Arg-5 ligand.

(2018) FEBS J 285: 1290-1304

Released	2017-04-05
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	AR5, DMS

5JGI	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with M45 compound

(2018) FEBS J 285: 1290-1304

Released	2017-05-10
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	AAG

5JGQ	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with Arg-7 ligand.

(2018) FEBS J 285: 1290-1304

Released	2017-05-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	6JY, DMS

5JHK	Download File View File

X-ray structure of neuropilin-1 b1 domain complexed with Arg-6 ligand.

(2018) FEBS J 285: 1290-1304

Released	2017-05-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	6K8

Yelland, T., Djordjevic, S.

5L73	Download File View File

MAM domain of human neuropilin-1

(2016) Structure 24: 2008-2015

Released	2016-10-26
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	BCN, CA, TAM

6FMC	Download File View File

Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure

Yelland, T., Djordjevic, S., Fotinou, K., Selwood, D., Zachary, I., Frankel, P.

(2018) J Med Chem 61: 4135-4154

Released	2018-10-17
Method	X-RAY DIFFRACTION 0.9 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	DUE

6FMF	Download File View File

Neuropilin-1 b1 domain in complex with EG01377; 2.8 Angstrom structure

Yelland, T., Djordjevic, S., Selwood, D., Zachary, I., Frankel, P.

(2018) J Med Chem 61: 4135-4154

Released	2018-10-17
Method	X-RAY DIFFRACTION 2.811 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-1 (protein)
Unique Ligands	DUE, TFA

6H6A	Download File View File

Crystal structure of UNC119 in complex with LCK peptide

Yelland, T., ElMaghloob, Y., McIlwraith, M., Stephen, L., Ismail, S.

(2018) Dev Cell 47: 122-132.e4

Released	2018-09-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	GLY-CYS-GLY-CYS-SER-SER (protein) Protein unc-119 homolog A (protein)
Unique Ligands	15P, GOL, MYR, PO4

6TDB	Download File View File

Neuropilin2-b1 domain in a complex with the C-terminal VEGFB167 peptide

Eldrid, C., Yu, L., Yelland, T., Fotinou, C., Djordjevic, S.

To be published

Released	2020-11-18
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens
Macromolecule	C-terminal VEGFB167 peptide (protein) Neuropilin-2 (protein)
Unique Ligands	ACE, EDO

6TJT	Download File View File

Neuropilin2-b1 domain in a complex with the C-terminal VEGFC peptide

Eldrid, C., Yu, L., Yelland, T., Fotinou, C., Djordjevic, S.

To be published

Released	2020-12-16
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Homo sapiens
Macromolecule	Neuropilin-2 (protein) VEGFC C terminal peptide (protein)
Unique Ligands	EDO, SO4

6TKK	Download File View File

Neuropilin 1-b1 domain in a complex with the C-terminal VEGFB186 peptide

Eldrid, C., Yu, L., Yelland, T., Fotinou, C., Djordjevic, S.

To be published

Released	2020-12-16
Method	X-RAY DIFFRACTION 1.06 Å
Organisms	Homo sapiens
Macromolecule	ACE-ARG-PRO-GLN-PRO-ARG (protein) Neuropilin-1 (protein)
Unique Ligands	EDO

7AJK	Download File View File

Crystal structure of CRYI-B Rac1 complex

Yelland, T., Anh, L., Insall, R., Machesky, L., Ismail, S.

(2021) Structure 29: 226-237.e4

Released	2020-11-18
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	CYFIP-related Rac1 interactor B (protein) Ras-related C3 botulinum toxin substrate 1 (protein)
Unique Ligands	GNP, MG

7AJL	Download File View File

Cyrstal structure of CYRI-B/Fam49B

Yelland, T., Anh, H., Insall, R., Machesky, L., Ismail, S.

(2021) Structure 29: 226-237.e4

Released	2020-11-18
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Mus musculus
Macromolecule	CYFIP-related Rac1 interactor B (protein)

7OK6	Download File View File

Crystal structure of UNC119B in complex with LCK peptide

(2021) Biochemistry 60: 1952-1963

Released	2021-06-09
Method	X-RAY DIFFRACTION 1.949 Å
Organisms	Homo sapiens
Macromolecule	LCK peptide (protein) Protein unc-119 homolog B (protein)
Unique Ligands	CA, EDO, MYR

7OK7	Download File View File

Crystal structure of the UNC119B ARL3 complex

(2021) Biochemistry 60: 1952-1963

Released	2021-06-09
Method	X-RAY DIFFRACTION 3.15 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	ADP-ribosylation factor-like protein 3 (protein) Protein unc-119 homolog B (protein)
Unique Ligands	EDO, GNP, GOL, MG, PO4

7P5U	Download File View File

Neuropilin-b1 in a complex with a VEGFB-derived peptide

Fotinou, C., Rhana, R., Yelland, T.

To be published

Released	2022-07-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	MGC0122 (protein) Neuropilin-1 (protein)

7Q9Q	Download File View File

Crystal structure of PDE6D Geranylgeranylated cystein complex

(2022) J Med Chem 65: 1898-1914

Released	2022-01-19
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Homo sapiens
Macromolecule	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (protein)
Unique Ligands	CMT, EDO, GER

7Q9R	Download File View File

Cocrystal structure of PDE6D bound to NRAS peptide

(2022) J Med Chem 65: 1898-1914

Released	2022-01-19
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (protein)
Unique Ligands	EDO, FAR, SO4

7Q9S	Download File View File

Crystal structure of PDE6D KRas peptide complex with Compound-1

(2022) J Med Chem 65: 1898-1914

Released	2022-01-19
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	KRas (protein) Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (protein)
Unique Ligands	9TI, DMS, EDO, FAR, SO4

7Q9U	Download File View File

Crystal structure of the high affinity KRas mutant PDE6D complex

Yelland, T., Ismail, I.

(2022) J Med Chem 65: 1898-1914

Released	2022-01-26
Method	X-RAY DIFFRACTION 2.238 Å
Organisms	Homo sapiens
Macromolecule	GTPase KRas (protein) Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (protein)
Unique Ligands	EDO, FAR, GDP, SO4