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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jenner, L."

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Search Summary

This query matches 49 Structures.

Refinements

Structure Determination Methodology

experimental (49)

Scientific Name of Source Organism

	Thermus thermophilus HB8 (17)
	Escherichia coli (14)
	Saccharomyces cerevisiae (14)
	Escherichia coli str. K-12 substr. MDS42 (6)
	Candida albicans SC5314 (5)
	Homo sapiens (5)
	synthetic construct (5)
	Candida albicans (3)
	Bos taurus (2)
	Gallus gallus (2)

More...

Taxonomy

	Eukaryota (31)
	Bacteria (29)
	other sequences (5)
	Duplodnaviria (4)

Experimental Method

	X-RAY DIFFRACTION (26)
	ELECTRON MICROSCOPY (23)

Polymer Entity Type

	Protein (49)
	RNA (37)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (8)
	2.5 - 3.0 (10)
	3.0 - 3.5 (21)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)
	> 4.5 (4)

Release Date

	1995 - 1999 (1)
	2005 - 2009 (1)
	2010 - 2014 (19)
	2020 - 2024 (28)

Enzyme Classification Name

	Hydrolases (2)
	Lyases (2)

Symmetry Type

	Asymmetric (45)
	Cyclic (5)

SCOP Classification

	All beta proteins (2)
	All alpha proteins (1)
	Peptides (1)
	Small proteins (1)

AllSelected

1 to 25 of 49 Structures

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1AYO	Download File View File

RECEPTOR BINDING DOMAIN OF BOVINE ALPHA-2-MACROGLOBULIN

Jenner, L.B., Husted, L., Thirup, S., Sottrup-Jensen, L., Nyborg, J.

(1998) Structure 6: 595-604

Released	1998-11-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bos taurus
Macromolecule	ALPHA-2-MACROGLOBULIN (protein)
Unique Ligands	CA
Unique branched monosaccharides	NAG

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3CU7	Download File View File

Human Complement Component 5

Fredslund, F., Andersen, G.R.

(2008) Nat Immunol 9: 753-760

Released	2008-06-10
Method	X-RAY DIFFRACTION 3.105 Å
Organisms	Homo sapiens
Macromolecule	Complement C5 (protein)
Unique Ligands	CD, NAG
Unique branched monosaccharides	NAG

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4B3X	Download File View File

Bacterial translation initiation factor IF2 (1-363), apo form

Simonetti, A., Urzhumtsev, A., Klaholz, B.P.

(2013) Acta Crystallogr D Biol Crystallogr 69: 925

Released	2013-05-29
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thermus thermophilus HB8
Macromolecule	TRANSLATION INITIATION FACTOR IF-2 (protein)
Unique Ligands	GOL

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4B43	Download File View File

Bacterial translation initiation factor IF2 (1-363), apo form, double mutant K86L H130A

Simonetti, A., Urzhumtsev, A., Klaholz, B.P.

To be published

Released	2013-09-18
Method	X-RAY DIFFRACTION 1.937 Å
Organisms	Thermus thermophilus HB8
Macromolecule	TRANSLATION INITIATION FACTOR IF-2 (protein)
Unique Ligands	GOL, IOD, MG

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4B44	Download File View File

Bacterial translation initiation factor IF2 (1-363), complex with GDP at pH8.0

Simonetti, A., Urzhumtsev, A., Klaholz, B.P.

To be published

Released	2013-09-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Thermus thermophilus HB8
Macromolecule	TRANSLATION INITIATION FACTOR IF-2 (protein)
Unique Ligands	GDP

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4B47	Download File View File

Bacterial translation initiation factor IF2 (1-363), complex with GDP at pH6.5

Simonetti, A., Urzhumtsev, A., Klaholz, B.P.

(2013) Acta Crystallogr D Biol Crystallogr 69: 925

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Thermus thermophilus HB8
Macromolecule	TRANSLATION INITIATION FACTOR IF-2 (protein)
Unique Ligands	GDP, MG

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4B48	Download File View File

Bacterial translation initiation factor IF2 (1-363), complex with GTP

Simonetti, A., Urzhumtsev, A., Klaholz, B.P.

(2013) Acta Crystallogr D Biol Crystallogr 69: 925

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Thermus thermophilus HB8
Macromolecule	TRANSLATION INITIATION FACTOR IF-2 (protein)
Unique Ligands	GTP, MG

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4V4P	Download File View File

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Jenner, L., Romby, P., Rees, B., Schulze-Briese, C., Springer, M., Ehresmann, C., Ehresmann, B., Moras, D., Yusupova, G., Yusupov, M.

(2005) Science 308: 120-123

Released	2014-07-09
Method	X-RAY DIFFRACTION 5.5 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Unique protein chains: 51 Unique nucleic acid chains: 5

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4V4X	Download File View File

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Jenner, L., Yusupova, G., Rees, B., Moras, D., Yusupov, M.

(2006) Nature 444: 391-394

Released	2014-07-09
Method	X-RAY DIFFRACTION 5 Å
Organisms	Escherichia coli Thermus thermophilus HB8
Macromolecule	Unique protein chains: 50 Unique nucleic acid chains: 5

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4V4Y	Download File View File

Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.

Jenner, L., Yusupova, G., Rees, B., Moras, D., Yusupov, M.

(2006) Nature 444: 391-394

Released	2014-07-09
Method	X-RAY DIFFRACTION 5.5 Å
Organisms	Escherichia coli Thermus thermophilus HB8
Macromolecule	Unique protein chains: 50 Unique nucleic acid chains: 5

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4V4Z	Download File View File

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Jenner, L., Yusupova, G., Rees, B., Moras, D., Yusupov, M.

(2006) Nature 444: 391-394

Released	2014-07-09
Method	X-RAY DIFFRACTION 4.51 Å
Organisms	Escherichia coli Thermus thermophilus HB8
Macromolecule	Unique protein chains: 50 Unique nucleic acid chains: 6

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4V7R	Download File View File

Yeast 80S ribosome.

Ben-Shem, A., Jenner, L., Yusupova, G., Yusupov, M.

(2010) Science 330: 1203-1209

Released	2014-07-09
Method	X-RAY DIFFRACTION 4 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 69 Unique nucleic acid chains: 4
Unique Ligands	OHX

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4V87	Download File View File

Crystal structure analysis of ribosomal decoding.

Demeshkina, N., Jenner, L., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, ZN

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4V88	Download File View File

The structure of the eukaryotic ribosome at 3.0 A resolution.

Ben-Shem, A., Garreau de Loubresse, N., Melnikov, S., Jenner, L., Yusupova, G., Yusupov, M.

(2011) Science 334: 1524-1529

Released	2014-07-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 80 Unique nucleic acid chains: 5
Unique Ligands	MG, OHX, ZN

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4V8B	Download File View File

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Jenner, L., Demeshkina, N., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, ZN

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4V8C	Download File View File

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

Jenner, L., Demeshkina, N., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, PAR, ZN

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4V8D	Download File View File

Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).

Jenner, L., Demeshkina, N., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, ZN

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4V8E	Download File View File

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).

Jenner, L., Demeshkina, N., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, OHX, ZN

Explore in 3D

4V8F	Download File View File

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).

Jenner, L., Demeshkina, N., Yusupov, M., Yusupova, G.

(2012) Nature 484: 256-259

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 6
Unique Ligands	MG, OHX, PAR, ZN

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4V9A	Download File View File

Crystal Structure of the 70S ribosome with tetracycline.

Jenner, L., Yusupov, M., Yusupova, G.

(2013) Proc Natl Acad Sci U S A 110: 3812-3816

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.2999 Å
Organisms	Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 5
Unique Ligands	MG, TAC, ZN

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4V9B	Download File View File

Crystal Structure of the 70S ribosome with tigecycline.

Jenner, L., Yusupov, M., Yusupova, G.

(2013) Proc Natl Acad Sci U S A 110: 3812-3816

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 5
Unique Ligands	MG, T1C, ZN

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6YEF	Download File View File

70S initiation complex with assigned rRNA modifications from Staphylococcus aureus

Fatkhullin, B., Golubev, A., Khusainov, I., Yusupova, G., Yusupov, M.

(2020) FEBS Lett 594: 3551-3567

Released	2021-01-27
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Escherichia coli DH5[alpha] Staphylococcus aureus subsp. aureus NCTC 8325 synthetic construct
Macromolecule	Unique protein chains: 47 Unique nucleic acid chains: 5
Unique Ligands	K, MG

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7OSA	Download File View File

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Djumagulov, M., Jenner, L., Rozov, A., Demeshkina, N., Yusupov, M., Yusupova, G.

(2021) Nature 600: 543-546

Released	2021-12-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 77 Unique nucleic acid chains: 6
Unique Ligands	GTP, MG, ZN

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7OSM	Download File View File

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Djumagulov, M., Jenner, L., Rozov, A., Demeshkina, N., Yusupov, M., Yusupova, G.

(2021) Nature 600: 543-546

Released	2021-12-08
Method	X-RAY DIFFRACTION 3 Å
Organisms	Escherichia coli Saccharomyces cerevisiae
Macromolecule	Unique protein chains: 76 Unique nucleic acid chains: 7
Unique Ligands	GTP, MG, ZN

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7PZY	Download File View File

Structure of the vacant Candida albicans 80S ribosome

Zgadzay, Y., Kolosova, O., Stetsenko, A., Jenner, L., Guskov, A., Yusupova, G., Yusupov, M.

(2022) Sci Adv 8: eabn1062-eabn1062

Released	2022-05-18
Method	ELECTRON MICROSCOPY 2.32 Å
Organisms	Candida albicans SC5314
Macromolecule	Unique protein chains: 75 Unique nucleic acid chains: 5
Unique Ligands	MG, PUT, SPD, ZN

1 to 25 of 49 Structures

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