RCSB PDB: Search

6FKY \| pdb_00006fky	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3-(benzylthio)succinyl-CPS1 peptide

Pannek, M., Steegborn, C.

(2018) J Med Chem 61: 2460-2471

Released	2018-03-21
Method	X-RAY DIFFRACTION 2.98 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	3(R)-(phenylthio)succinyl-CPS1 peptide (protein) NAD-dependent protein deacylase sirtuin-5, mitochondrial (protein)
Unique Ligands	DZK, E9N, EDO, EPE, NA, ZN

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6FKZ \| pdb_00006fkz	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3-(phenylthio)succinyl-CPS1 peptide

Pannek, M., Steegborn, C.

(2018) J Med Chem 61: 2460-2471

Released	2018-05-16
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	3(R)-(phenylthio)succinyl-CPS1 peptide (protein) 3(S)-(phenylthio)succinyl-CPS1 peptide (protein) NAD-dependent protein deacylase sirtuin-5, mitochondrial (protein)
Unique Ligands	EPE, GOL, ZN

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6FLG \| pdb_00006flg	Download File View File

Crystal structure of zebrafish Sirtuin 5 in complex with 3(S)-(naphthylthio)succinyl-CPS1 peptide

Pannek, M., Steegborn, C.

(2018) J Med Chem 61: 2460-2471

Released	2018-04-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Danio rerio Homo sapiens
Macromolecule	3(S)-(naphthylthio)succinyl-CPS1 peptide (protein) NAD-dependent protein deacylase sirtuin-5, mitochondrial (protein)
Unique Ligands	DMS, EDO, EPE, ZN

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8QOO \| pdb_00008qoo	Download File View File

Crystal structure of human Sirt2 in complex with the peptide-based pseudo-inhibitor TNFn-4.1

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-09
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based pseudo-inhibitor TNFn-4.1 (protein)
Unique Ligands	BU3, EDO, WGN, WH8, ZN

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8QT0 \| pdb_00008qt0	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-3 (protein)
Unique Ligands	EDO, PEG, WWE, ZN

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8QT1 \| pdb_00008qt1	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-5 (protein)
Unique Ligands	EDO, WU3, ZN

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8QT2 \| pdb_00008qt2	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-6 (protein)
Unique Ligands	BTB, BU3, EDO, WU8, ZN

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8QT3 \| pdb_00008qt3	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5 and NAD+

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-5 (protein)
Unique Ligands	EDO, NAD, WU3, ZN

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8QT4 \| pdb_00008qt4	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6 and NAD+

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-6 (protein)
Unique Ligands	BTB, BU3, DMS, EDO, NAD, PGE, WU8, ZN

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8QT8 \| pdb_00008qt8	Download File View File

Crystal structure of human Sirt2 in complex with a TNFa-Myr analogue TNFn-34

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based TNFa-Myr analogue TNFn-34 (protein)
Unique Ligands	WWK, ZN

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8QTU \| pdb_00008qtu	Download File View File

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3 and NAD+

Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.

To be published

Released	2024-10-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	NAD-dependent protein deacetylase sirtuin-2 (protein) Peptide-based super-slow substrate TNFn-3 (protein)
Unique Ligands	EDO, NAD, WWE, ZN

6FKY | pdb_00006fky

Crystal structure of zebrafish Sirtuin 5 in complex with 3-(benzylthio)succinyl-CPS1 peptide

6FKZ | pdb_00006fkz

Crystal structure of zebrafish Sirtuin 5 in complex with 3-(phenylthio)succinyl-CPS1 peptide

6FLG | pdb_00006flg

Crystal structure of zebrafish Sirtuin 5 in complex with 3(S)-(naphthylthio)succinyl-CPS1 peptide

8QOO | pdb_00008qoo

Crystal structure of human Sirt2 in complex with the peptide-based pseudo-inhibitor TNFn-4.1

8QT0 | pdb_00008qt0

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3

8QT1 | pdb_00008qt1

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5

8QT2 | pdb_00008qt2

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6

8QT3 | pdb_00008qt3

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5 and NAD+

8QT4 | pdb_00008qt4

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6 and NAD+

8QT8 | pdb_00008qt8

Crystal structure of human Sirt2 in complex with a TNFa-Myr analogue TNFn-34

8QTU | pdb_00008qtu

Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3 and NAD+

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Enzyme Classification Name

Symmetry Type

6FKY | pdb_00006fky

6FKZ | pdb_00006fkz

6FLG | pdb_00006flg

8QOO | pdb_00008qoo

8QT0 | pdb_00008qt0

8QT1 | pdb_00008qt1

8QT2 | pdb_00008qt2

8QT3 | pdb_00008qt3

8QT4 | pdb_00008qt4

8QT8 | pdb_00008qt8

8QTU | pdb_00008qtu