RCSB PDB: Search

3D9H	Download File View File

Crystal Structure of the Splice Variant of Human ASB9 (hASB9-2), an Ankyrin Repeat Protein

Fei, X., Gu, X., Fan, S., Zhang, C., Ji, C.

To be published

Released	2009-06-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	cDNA FLJ77766, highly similar to Homo sapiens ankyrin repeat and SOCS box-containing 9 (ASB9), transcript variant 2, mRNA (protein)

3HWP	Download File View File

Crystal structure and computational analyses provide insights into the catalytic mechanism of 2, 4-diacetylphloroglucinol hydrolase PhlG from Pseudomonas fluorescens

He, Y.-X., Huang, L., Xue, Y., Fei, X., Teng, Y.-B., Zhou, C.-Z.

(2010) J Biol Chem 285: 4603-4611

Released	2009-12-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas protegens Pf-5
Macromolecule	PhlG (protein)
Unique Ligands	CL, NI, ZN

4KI8	Download File View File

Crystal structure of a GroEL-ADP complex in the relaxed allosteric state

Fei, X., Yang, D., LaRonde-LeBlanc, N., Lorimer, G.H.

(2013) Proc Natl Acad Sci U S A 110: E2958-E2966

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.722 Å
Organisms	Escherichia coli
Macromolecule	GroEL protein (protein)
Unique Ligands	ADP, CA, K, MG, MPD

4PKN	Download File View File

Crystal structure of the football-shaped GroEL-GroES2-(ADPBeFx)14 complex containing substrate Rubisco

Fei, X., Ye, X., Laronde-Leblanc, N., Lorimer, G.H.

(2014) Proc Natl Acad Sci U S A 111: 12775-12780

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.66 Å
Organisms	Escherichia coli
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, BEF, K, MG

4PKO	Download File View File

Crystal structure of the Football-shaped GroEL-GroES2-(ADPBeFx)14 complex

Fei, X., Ye, X., Laronde-Leblanc, N., Lorimer, G.H.

(2014) Proc Natl Acad Sci U S A 111: 12775-12780

Released	2014-08-20
Method	X-RAY DIFFRACTION 3.84 Å
Organisms	Escherichia coli
Macromolecule	10 kDa chaperonin (protein) 60 kDa chaperonin (protein)
Unique Ligands	ADP, BEF, K, MG

4WGL	Download File View File

Crystal structure of a GroEL D83A/R197A double mutant

Yang, D., Fei, X., LaRonde, N.A., Beckett, D., Lund, P.A., Lorimer, G.H.

To be published

Released	2015-09-30
Method	X-RAY DIFFRACTION 3.13 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

4WSC	Download File View File

Crystal structure of a GroELK105A mutant

Lorimer, G.H., Ye, X., Fei, X., Yang, D., Corsepius, N., LaRonde, N.A.

To be published

Released	2015-11-11
Method	X-RAY DIFFRACTION 3.04 Å
Organisms	Escherichia coli K-12
Macromolecule	60 kDa chaperonin (protein)

6PO1	Download File View File

ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.2 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PO3	Download File View File

ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.28 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6POD	Download File View File

ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.05 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6POS	Download File View File

ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.12 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PP5	Download File View File

ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 3.98 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PP6	Download File View File

ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.28 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PP7	Download File View File

ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.05 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PP8	Download File View File

ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 4.12 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) substrate peptide (protein)
Unique Ligands	ADP, AGS

6PPE	Download File View File

ClpP and ClpX IGF loop in ClpX-ClpP complex with D7 symmetry

(2020) Elife 9:

Released	2020-03-11
Method	ELECTRON MICROSCOPY 3.19 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein)

6WR2	Download File View File

ClpP and ClpX IGF loop in ClpX-ClpP complex bound to ssrA tagged GFP

Fei, X., Sauer, R.T.

(2020) Elife 9:

Released	2020-11-04
Method	ELECTRON MICROSCOPY 2.88 Å
Organisms	Escherichia coli K-12
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein)

6WRF	Download File View File

ClpX-ClpP complex bound to GFP-ssrA, recognition complex

Fei, X., Sauer, R.T.

(2020) Elife 9:

Released	2020-11-04
Method	ELECTRON MICROSCOPY 3.14 Å
Organisms	Aequorea victoria Escherichia coli K-12
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) Green fluorescent protein (protein)
Unique Ligands	ADP, AGS, MG

6WSG	Download File View File

ClpX-ClpP complex bound to ssrA-tagged GFP, intermediate complex

Fei, X., Sauer, R.T.

(2020) Elife 9:

Released	2020-11-04
Method	ELECTRON MICROSCOPY 3.16 Å
Organisms	Aequorea victoria Escherichia coli synthetic construct
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpX (protein) ATP-dependent Clp protease proteolytic subunit (protein) Green fluorescent protein, + ssrA tag (protein)
Unique Ligands	AGS, MG

7UIV	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class IIa

(2022) Nat Struct Mol Biol 29: 1068-1079

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.38 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpA (protein) ATP-dependent Clp protease adapter protein ClpS (protein) ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	ADP, AGS, MG

7UIW	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class IIb

(2022) Nat Struct Mol Biol 29: 1068-1079

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.33 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpA (protein) ATP-dependent Clp protease adapter protein ClpS (protein) ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	ADP, AGS, MG

7UIX	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class I

(2022) Nat Struct Mol Biol 29: 1068-1079

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.24 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpA (protein) ATP-dependent Clp protease adapter protein ClpS (protein) ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	ADP, AGS, MG

7UIY	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class IIIa

(2022) Nat Struct Mol Biol 29: 1068-1079

Released	2022-10-26
Method	ELECTRON MICROSCOPY 3.22 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpA (protein) ATP-dependent Clp protease adapter protein ClpS (protein) ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	ADP, AGS, MG

7UIZ	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class IIc

(2022) Nat Struct Mol Biol 29: 1068-1079

Released	2022-11-09
Method	ELECTRON MICROSCOPY 3.24 Å
Organisms	Escherichia coli
Macromolecule	ATP-dependent Clp protease ATP-binding subunit ClpA (protein) ATP-dependent Clp protease adapter protein ClpS (protein) ATP-dependent Clp protease proteolytic subunit (protein)
Unique Ligands	ADP, AGS, MG

7UJ0	Download File View File

ClpAP complex bound to ClpS N-terminal extension, class IIIb