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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Masson, G.R."

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (13)
	Saccharomyces cerevisiae (3)
	Lama glama (1)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

Eukaryota (16)

Experimental Method

	X-RAY DIFFRACTION (12)
	ELECTRON MICROSCOPY (4)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	2.0 - 2.5 (4)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)
	4.0 - 4.5 (1)
	> 4.5 (5)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (9)
	2020 - 2024 (5)

Enzyme Classification Name

	Transferases (13)
	Hydrolases (8)

Symmetry Type

	Asymmetric (12)
	Cyclic (5)

SCOP Classification

Alpha and beta proteins (a/b) (2)

AllSelected

1 to 16 of 16 Structures

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4D0L \| pdb_00004d0l	Download File View File

Phosphatidylinositol 4-kinase III beta-PIK93 in a complex with Rab11a- GTP gammaS

Burke, J.E., Inglis, A.J., Perisic, O., Masson, G.R., McLaughin, S.H., Rutaganira, F., Shokat, K.M., Williams, R.L.

(2014) Science 344: 1035

Released	2014-05-28
Method	X-RAY DIFFRACTION 2.94 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHATIDYLINOSITOL 4-KINASE BETA (protein) RAS-RELATED PROTEIN RAB-11A (protein)
Unique Ligands	093, GSP, MG

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4D0M \| pdb_00004d0m	Download File View File

Phosphatidylinositol 4-kinase III beta in a complex with Rab11a-GTP- gamma-S and the Rab-binding domain of FIP3

Burke, J.E., Inglis, A.J., Perisic, O., Masson, G.R., McLaughlin, S.H., Rutaganira, F., Shokat, K.M., Williams, R.L.

(2014) Science 344: 1035

Released	2014-05-28
Method	X-RAY DIFFRACTION 6 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHATIDYLINOSITOL 4-KINASE BETA (protein) RAB11 FAMILY-INTERACTING PROTEIN 3 (protein) RAS-RELATED PROTEIN RAB-11A (protein)
Unique Ligands	093, GSP, MG

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5C46 \| pdb_00005c46	Download File View File

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta in complex with GTP gamma S loaded Rab11

Burke, J.E., Fowler, M.L.

(2016) Protein Sci 25: 826-839

Released	2016-01-20
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	GSP, MG, SO4

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5C4G \| pdb_00005c4g	Download File View File

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with the inhibitor BQR695 in complex with GDP loaded Rab11

Burke, J.E., Fowler, M.L.

(2016) Protein Sci 25: 826-839

Released	2016-01-20
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	BQR, GDP, MG, SO4

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5DFZ \| pdb_00005dfz	Download File View File

Structure of Vps34 complex II from S. cerevisiae.

Rostislavleva, K., Soler, N., Ohashi, Y., Zhang, L., Williams, R.L.

(2015) Science 350: aac7365-aac7365

Released	2015-10-07
Method	X-RAY DIFFRACTION 4.4 Å
Organisms	Lama glama Saccharomyces cerevisiae Saccharomyces cerevisiae S288C
Macromolecule	Unique protein chains: 6

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5KC1 \| pdb_00005kc1	Download File View File

Structure of the C-terminal dimerization domain of Atg38

Ohashi, Y., Soler, N., Garcia-Ortegon, M., Zhang, L., Perisic, O., Masson, G.R., Johnson, C.M., Williams, R.J.

(2016) Autophagy 12: 2129-2144

Released	2016-10-05
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Autophagy-related protein 38 (protein)
Unique Ligands	CL, EDO, IOD, NA, NH4, NO3, SO4

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5KC2 \| pdb_00005kc2	Download File View File

Negative stain structure of Vps15/Vps34 complex

Kirsten, M.L., Zhang, L., Ohashi, Y., Perisic, O., Williams, R.L., Sachse, C.

(2016) Autophagy 12: 2129-2144

Released	2016-10-05
Method	ELECTRON MICROSCOPY 28 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Phosphatidylinositol 3-kinase VPS34 (protein) Serine/threonine-protein kinase VPS15 (protein)

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6S6A \| pdb_00006s6a	Download File View File

Crystal structure of RagA-Q66L/RagC-T90N GTPase heterodimer complex

Anandapadamanaban, M., Masson, G.R., Perisic, O., Kaufman, J., Williams, R.L.

(2019) Science 366: 203-210

Released	2019-10-16
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Homo sapiens
Macromolecule	Ras-related GTP-binding protein A (protein) Ras-related GTP-binding protein C (protein)
Unique Ligands	9JE, GDP, GTP, MG

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6S6D \| pdb_00006s6d	Download File View File

Crystal structure of RagA-Q66L-GTP/RagC-S75N-GDP GTPase heterodimer complex

Anandapadamanaban, M., Masson, G.R., Perisic, O., Kaufman, J., Williams, R.L.

(2019) Science 366: 203-210

Released	2019-10-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Ras-related GTP-binding protein A (protein) Ras-related GTP-binding protein C (protein)
Unique Ligands	9JE, GDP, GTP, MG

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6SB0 \| pdb_00006sb0	Download File View File

cryo-EM structure of mTORC1 bound to PRAS40-fused active RagA/C GTPases

Anandapadamanaban, M., Berndt, A., Masson, G.R., Perisic, O., Williams, R.L.

(2019) Science 366: 203-210

Released	2019-10-16
Method	ELECTRON MICROSCOPY 5.5 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 6
Unique Ligands	GDP, GTP

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6SB2 \| pdb_00006sb2	Download File View File

cryo-EM structure of mTORC1 bound to active RagA/C GTPases

Anandapadamanaban, M., Berndt, A., Masson, G.R., Perisic, O., Williams, R.L.

(2019) Science 366: 203-210

Released	2019-10-16
Method	ELECTRON MICROSCOPY 6.2 Å
Organisms	Homo sapiens
Macromolecule	Ras-related GTP-binding protein A (protein) Ras-related GTP-binding protein C (protein) Regulatory-associated protein of mTOR (protein) Target of rapamycin complex subunit LST8 (protein) mTOR,Serine/threonine-protein kinase mTOR,mTOR,Serine/threonine-protein kinase mTOR (protein)
Unique Ligands	GDP, GTP

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7OWG \| pdb_00007owg	Download File View File

human DEPTOR in a complex with mutant human mTORC1 A1459P

Heimhalt, M., Berndt, A., Wagstaff, J., Anandapadamanaban, M., Perisic, O., Maslen, S., McLaughlin, S., Yu, W.-H., Masson, G.R., Boland, A., Ni, X., Yamashita, K., Murshudov, G.N., Skehel, M., Freund, S.M., Williams, R.L.

(2021) Elife 10:

Released	2021-09-08
Method	ELECTRON MICROSCOPY 4.7 Å
Organisms	Homo sapiens
Macromolecule	DEP domain-containing mTOR-interacting protein (protein) Regulatory-associated protein of mTOR (protein) Serine/threonine-protein kinase mTOR (protein) Target of rapamycin complex subunit LST8 (protein)

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7PG5 \| pdb_00007pg5	Download File View File

Crystal Structure of PI3Kalpha

Gong, G., Pinotsis, N., Williams, R.L., Vanhaesebroeck, B.

(2023) Nature 618: 159-168

Released	2022-08-24
Method	X-RAY DIFFRACTION 2.20029074868 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3-kinase regulatory subunit alpha (protein) Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (protein)
Unique Ligands	GOL, PO4

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7PG6 \| pdb_00007pg6	Download File View File

Crystal Structure of PI3Kalpha in complex with the inhibitor NVP-BYL719

Gong, G., Pinotsis, N., Williams, R.L., Vanhaesebroeck, B.

(2023) Nature 618: 159-168

Released	2022-08-24
Method	X-RAY DIFFRACTION 2.49943744477 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 3-kinase regulatory subunit alpha (protein) Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (protein)
Unique Ligands	1LT, NA

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8BFU \| pdb_00008bfu	Download File View File

Crystal structure of the apo p110alpha catalytic subunit from homo sapiens

Gong, G.Q., Bellini, D., Vanhaesebroeck, B., Williams, R.L.

(2023) Nature 618: 159-168

Released	2023-02-15
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (protein)

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8OW2 \| pdb_00008ow2	Download File View File

Crystal structure of the p110alpha catalytic subunit from homo sapiens in complex with activator 1938

Gong, G.Q., Bellini, D., Vanhaesebroeck, B., Williams, R.L.

(2023) Nature 618: 159-168

Released	2023-05-24
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (protein)
Unique Ligands	QIH

1 to 16 of 16 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4D0L | pdb_00004d0l

Phosphatidylinositol 4-kinase III beta-PIK93 in a complex with Rab11a- GTP gammaS

4D0M | pdb_00004d0m

Phosphatidylinositol 4-kinase III beta in a complex with Rab11a-GTP- gamma-S and the Rab-binding domain of FIP3

5C46 | pdb_00005c46

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta in complex with GTP gamma S loaded Rab11

5C4G | pdb_00005c4g

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with the inhibitor BQR695 in complex with GDP loaded Rab11

5DFZ | pdb_00005dfz

Structure of Vps34 complex II from S. cerevisiae.

5KC1 | pdb_00005kc1

Structure of the C-terminal dimerization domain of Atg38

5KC2 | pdb_00005kc2

Negative stain structure of Vps15/Vps34 complex

6S6A | pdb_00006s6a

Crystal structure of RagA-Q66L/RagC-T90N GTPase heterodimer complex

6S6D | pdb_00006s6d

Crystal structure of RagA-Q66L-GTP/RagC-S75N-GDP GTPase heterodimer complex

6SB0 | pdb_00006sb0

cryo-EM structure of mTORC1 bound to PRAS40-fused active RagA/C GTPases

6SB2 | pdb_00006sb2

cryo-EM structure of mTORC1 bound to active RagA/C GTPases

7OWG | pdb_00007owg

human DEPTOR in a complex with mutant human mTORC1 A1459P

7PG5 | pdb_00007pg5

Crystal Structure of PI3Kalpha

7PG6 | pdb_00007pg6

Crystal Structure of PI3Kalpha in complex with the inhibitor NVP-BYL719

8BFU | pdb_00008bfu

Crystal structure of the apo p110alpha catalytic subunit from homo sapiens

8OW2 | pdb_00008ow2

Crystal structure of the p110alpha catalytic subunit from homo sapiens in complex with activator 1938

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4D0L | pdb_00004d0l

4D0M | pdb_00004d0m

5C46 | pdb_00005c46

5C4G | pdb_00005c4g

5DFZ | pdb_00005dfz

5KC1 | pdb_00005kc1

5KC2 | pdb_00005kc2

6S6A | pdb_00006s6a

6S6D | pdb_00006s6d

6SB0 | pdb_00006sb0

6SB2 | pdb_00006sb2

7OWG | pdb_00007owg

7PG5 | pdb_00007pg5

7PG6 | pdb_00007pg6

8BFU | pdb_00008bfu

8OW2 | pdb_00008ow2