RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Meshkin, H."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Human immunodeficiency virus 2 (5)
	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) (4)
	Homo sapiens (3)
	HIV-1 M:B_HXB2R (2)
	Sus scrofa (1)

Taxonomy

	Riboviria (11)
	Eukaryota (3)

Experimental Method

ELECTRON MICROSCOPY (12)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (5)
	3.5 - 4.0 (1)

Release Date

	2020 - 2024 (7)
	2025 - 2029 (5)

Enzyme Classification Name

Hydrolases (1)

Symmetry Type

	Cyclic (10)
	Asymmetric (1)
	Icosahedral (1)

AllSelected

1 to 12 of 12 Structures

Page 1 of 1

Sort by

Explore in 3D

7RX0 \| pdb_00007rx0	Download File View File

Complex of AMPPNP-Kif7 and Gli2 Zinc-Finger domain bound to microtubules

Mani, N., Wilson-Kubalek, E.M., Haque, F., Freniere, C., Milligan, R.A., Subramanian, R.

(2022) Nat Cell Biol 24: 1088-1098

Released	2022-06-15
Method	ELECTRON MICROSCOPY 3.89 Å
Organisms	Homo sapiens Sus scrofa
Macromolecule	Kinesin-like protein KIF7 (protein) Tubulin alpha-1A chain (protein) Tubulin beta chain (protein) Zinc finger protein GLI2 (protein)
Unique Ligands	ANP, G2P, GTP, MG

Explore in 3D

9CLJ \| pdb_00009clj	Download File View File

HIV-2 CA T=1 Icosahedron; assembled via lipid templating

Cook, M., Freniere, C., Xiong, Y.

(2025) Cell Rep 44: 115245-115245

Released	2025-03-05
Method	ELECTRON MICROSCOPY 1.98 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	Capsid protein p24 (protein)
Unique Ligands	IHP

Explore in 3D

9CNS \| pdb_00009cns	Download File View File

HIV-2 CA hexamer; assembled via liposome templating

Cook, M., Freniere, C., Xiong, Y.

(2025) Cell Rep 44: 115245-115245

Released	2025-03-05
Method	ELECTRON MICROSCOPY 3.25 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	Capsid protein p24 (protein)
Unique Ligands	IHP

Explore in 3D

9CNT \| pdb_00009cnt	Download File View File

HIV-2 CA pentamer; assembled via liposome templating

Cook, M., Freniere, C., Xiong, Y.

(2025) Cell Rep 44: 115245-115245

Released	2025-03-05
Method	ELECTRON MICROSCOPY 2.97 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	Capsid protein p24 (protein)
Unique Ligands	IHP

Explore in 3D

9CNU \| pdb_00009cnu	Download File View File

HIV-2 CA hexamer bound with Nup153 peptide; assembled with liposome templating

Cook, M., Freniere, C., Xiong, Y.

(2025) Cell Rep 44: 115245-115245

Released	2025-03-05
Method	ELECTRON MICROSCOPY 2.99 Å
Organisms	Homo sapiens Human immunodeficiency virus 2
Macromolecule	Capsid protein p24 (protein) Nuclear pore complex protein Nup153 (protein)
Unique Ligands	IHP

Explore in 3D

9CNV \| pdb_00009cnv	Download File View File

HIV-2 CA hexamer bound with CPSF6 peptide; assembled via liposome templating

Cook, M., Freniere, C., Xiong, Y.

(2025) Cell Rep 44: 115245-115245

Released	2025-03-05
Method	ELECTRON MICROSCOPY 3.16 Å
Organisms	Homo sapiens Human immunodeficiency virus 2
Macromolecule	Capsid protein p24 (protein) Isoform 2 of Cleavage and polyadenylation specificity factor subunit 6 (protein)
Unique Ligands	IHP

Explore in 3D

9CWV \| pdb_00009cwv	Download File View File

Gag CA-SP1 immature lattice from intact enveloped virus-like particles

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.42 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Gag (protein)
Unique Ligands	IHP

Explore in 3D

9D6C \| pdb_00009d6c	Download File View File

Gag CA-SP1 immature lattice bound with Lenacapavir and Bevirimat from enveloped virus like particles

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.1 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	Gag (protein)
Unique Ligands	2I4, IHP, QNG

Explore in 3D

9D6D \| pdb_00009d6d	Download File View File

Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 2.18 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag polyprotein (protein)
Unique Ligands	IHP, QNG

Explore in 3D

9D6E \| pdb_00009d6e	Download File View File

Gag CA-SP1 immature lattice bound with Bevirimat from enveloped virus like particles

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.09 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag polyprotein (protein)
Unique Ligands	2I4, IHP

Explore in 3D

9D88 \| pdb_00009d88	Download File View File

Gag CA-SP1 immature lattice from enveloped and perforated virus like particles

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.18 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag polyprotein (protein)
Unique Ligands	IHP

Explore in 3D

9DWD \| pdb_00009dwd	Download File View File

Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles (T8I)

Wu, C., Meuser, M.E., Xiong, Y.

(2024) bioRxiv

Released	2024-10-30
Method	ELECTRON MICROSCOPY 3.13 Å
Organisms	Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Macromolecule	Gag (protein)
Unique Ligands	IHP, QNG

1 to 12 of 12 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

7RX0 | pdb_00007rx0

Complex of AMPPNP-Kif7 and Gli2 Zinc-Finger domain bound to microtubules

9CLJ | pdb_00009clj

HIV-2 CA T=1 Icosahedron; assembled via lipid templating

9CNS | pdb_00009cns

HIV-2 CA hexamer; assembled via liposome templating

9CNT | pdb_00009cnt

HIV-2 CA pentamer; assembled via liposome templating

9CNU | pdb_00009cnu

HIV-2 CA hexamer bound with Nup153 peptide; assembled with liposome templating

9CNV | pdb_00009cnv

HIV-2 CA hexamer bound with CPSF6 peptide; assembled via liposome templating

9CWV | pdb_00009cwv

Gag CA-SP1 immature lattice from intact enveloped virus-like particles

9D6C | pdb_00009d6c

Gag CA-SP1 immature lattice bound with Lenacapavir and Bevirimat from enveloped virus like particles

9D6D | pdb_00009d6d

Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles

9D6E | pdb_00009d6e

Gag CA-SP1 immature lattice bound with Bevirimat from enveloped virus like particles

9D88 | pdb_00009d88

Gag CA-SP1 immature lattice from enveloped and perforated virus like particles

9DWD | pdb_00009dwd

Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles (T8I)

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

7RX0 | pdb_00007rx0

9CLJ | pdb_00009clj

9CNS | pdb_00009cns

9CNT | pdb_00009cnt

9CNU | pdb_00009cnu

9CNV | pdb_00009cnv

9CWV | pdb_00009cwv

9D6C | pdb_00009d6c

9D6D | pdb_00009d6d

9D6E | pdb_00009d6e

9D88 | pdb_00009d88

9DWD | pdb_00009dwd