RCSB PDB: Search

2ILP \| pdb_00002ilp	Download File View File

Clostridium botulinum Serotype A Light Chain inhibited by 4-chlorocinnamic hydroxamate

Silvaggi, N.R., Allen, K.N.

(2007) Chem Biol 14: 533-542

Released	2007-06-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Clostridium botulinum
Macromolecule	Botulinum neurotoxin A light-chain (protein)
Unique Ligands	GB5, PO4, ZN

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2IMA \| pdb_00002ima	Download File View File

Clostridium botulinum Neurotoxin Serotype A Light Chain Inhibited by 2,4-dichlorocinnamic hydroxamate

Silvaggi, N.R., Allen, K.N.

(2007) Chem Biol 14: 533-542

Released	2007-06-05
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Clostridium botulinum
Macromolecule	Botulinum neurotoxin A light-chain (protein)
Unique Ligands	GB4, ZN

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2IMB \| pdb_00002imb	Download File View File

Clostridium botulinum Neurotoxin Serotype A Light Chain Inhibited by L-arginine hydroxamate

Silvaggi, N.R., Allen, K.N.

(2007) Chem Biol 14: 533-542

Released	2007-06-05
Method	X-RAY DIFFRACTION 2.41 Å
Organisms	Clostridium botulinum
Macromolecule	Botulinum neurotoxin A light-chain (protein)
Unique Ligands	AHL, ZN

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2IMC \| pdb_00002imc	Download File View File

Clostridium botulinum Neurotoxin Serotype A Light Chain, Residues 1-424

Silvaggi, N.R., Allen, K.N.

(2007) Chem Biol 14: 533-542

Released	2007-06-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Clostridium botulinum
Macromolecule	Botulinum neurotoxin A light-chain (protein)
Unique Ligands	ZN

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4IJH \| pdb_00004ijh	Download File View File

Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A

Feldkamp, M.D., Patrone, J.D., Kennedy, J.P., Frank, A.O., Vangamudi, B., Pelz, N.F., Rossanese, O.W., Waterson, A.G., Fesik, S.W., Chazin, W.J.

(2013) ACS Med Chem Lett 4: 601-605

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.498 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1EJ

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4IJL \| pdb_00004ijl	Download File View File

Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A

Feldkamp, M.D., Patrone, J.D., Kennedy, J.P., Frank, A.O., Vangamudi, B., Pelz, N.F., Rossanese, O.W., Waterson, A.G., Fesik, S.W., Chazin, W.J.

(2013) ACS Med Chem Lett 4: 601-605

Released	2013-08-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1EK

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4IPC \| pdb_00004ipc	Download File View File

Structure of the N-terminal domain of RPA70, E7R mutant

Feldkamp, M.D., Frank, A.O., Vangamudi, B., Fesik, S.W., Chazin, W.J.

(2013) Biochemistry 52: 6515-6524

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.22 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)

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4IPD \| pdb_00004ipd	Download File View File

Structure of the N-terminal domain of RPA70, E100R mutant

Feldkamp, M.D., Frank, A.O., Vangamudi, B., Fesik, S.W., Chazin, W.J.

(2013) Biochemistry 52: 6515-6524

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)

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4IPG \| pdb_00004ipg	Download File View File

Structure of the N-terminal domain of RPA70, E7R, E100R mutant

Feldkamp, M.D., Frank, A.O., Vangamudi, B., Fesik, S.W., Chazin, W.J.

(2013) Biochemistry 52: 6515-6524

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)

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4IPH \| pdb_00004iph	Download File View File

Structure of N-terminal domain of RPA70 in complex with VU079104 inhibitor

Feldkamp, M.D., Frank, A.O., Vangamudi, B., Fesik, S.W., Chazin, W.J.

(2013) Biochemistry 52: 6515-6524

Released	2013-09-11
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1FJ

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4LUO \| pdb_00004luo	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejniczak, E.T., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1DZ

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4LUV \| pdb_00004luv	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejnczak, E.O., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1DZ, 1XS

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4LUZ \| pdb_00004luz	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejnczak, E.O., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1XT

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4LW1 \| pdb_00004lw1	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejnczak, E.O., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.631 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1XS

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4LWC \| pdb_00004lwc	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejnczak, E.O., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	1XU

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4NYI \| pdb_00004nyi	Download File View File

Approach for Targeting Ras with Small Molecules that Activate SOS-Mediated Nucleotide Exchange

Burns, M.C., Sun, Q., Phan, J., Fesik, S.W.

(2014) Proc Natl Acad Sci U S A 111: 3401-3406

Released	2014-03-12
Method	X-RAY DIFFRACTION 2.9612 Å
Organisms	Homo sapiens
Macromolecule	GTPase HRas (protein) Son of sevenless homolog 1 (protein)
Unique Ligands	2PX, GNP, MG

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4NYJ \| pdb_00004nyj	Download File View File

Approach for Targeting Ras with Small Molecules that Activate SOS-Mediated Nucleotide Exchange

Burns, M.C., Sun, Q., Phan, J., Fesik, S.W.

(2014) Proc Natl Acad Sci U S A 111: 3401-3406

Released	2014-03-12
Method	X-RAY DIFFRACTION 2.8522 Å
Organisms	Homo sapiens
Macromolecule	GTPase HRas (protein) Son of sevenless homolog 1 (protein)
Unique Ligands	2PZ, GNP, MG

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4NYM \| pdb_00004nym	Download File View File

Approach for Targeting Ras with Small Molecules that Activate SOS-Mediated Nucleotide Exchange

Burns, M.C., Sun, Q., Phan, J., Fesik, S.W.

(2014) Proc Natl Acad Sci U S A 111: 3401-3406

Released	2014-03-12
Method	X-RAY DIFFRACTION 3.5529 Å
Organisms	Homo sapiens
Macromolecule	GTPase HRas (protein) Son of sevenless homolog 1 (protein)
Unique Ligands	GNP, MG, RND

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4O0A \| pdb_00004o0a	Download File View File

Fragment-Based Discovery of a Potent Inhibitor of Replication Protein A Protein-Protein Interactions

Feldkamp, M.D., Frank, A.O., Kennedy, J.P., Waterson, A.G., Olejniczak, E.T., Pelz, N.F., Patrone, J.D., Vangamudi, B., Camper, D.V., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2013) J Med Chem 56: 9242-9250

Released	2014-01-08
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	2P9

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4R4C \| pdb_00004r4c	Download File View File

Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)-2-chlorobenzamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid

Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2015) ACS Med Chem Lett 6: 140-145

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	3HS

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4R4I \| pdb_00004r4i	Download File View File

Structure of RPA70N in complex with 5-(4-((6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid

Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2015) ACS Med Chem Lett 6: 140-145

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	3HV

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4R4O \| pdb_00004r4o	Download File View File

Crystal structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)benzyl)carbamothioyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid

Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2015) ACS Med Chem Lett 6: 140-145

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.33 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	3HW

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4R4Q \| pdb_00004r4q	Download File View File

Crystal structure of RPA70N in complex with 5-(3-((N-(4-(5-carboxyfuran-2-yl)benzyl)acetamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid

Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2015) ACS Med Chem Lett 6: 140-145

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	3HZ

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4R4T \| pdb_00004r4t	Download File View File

Crystal Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)phenylthioamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid

Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.

(2015) ACS Med Chem Lett 6: 140-145

Released	2014-11-19
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Homo sapiens
Macromolecule	Replication protein A 70 kDa DNA-binding subunit (protein)
Unique Ligands	3J0

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6BVI \| pdb_00006bvi	Download File View File

Ras:SOS:Ras in complex with a small molecule activator

Phan, J., Abbott, J., Fesik, S.W.

(2018) J Med Chem 61: 6002-6017

Released	2018-10-24
Method	X-RAY DIFFRACTION 1.746 Å
Organisms	Homo sapiens
Macromolecule	GTPase HRas (protein) Son of sevenless homolog 1 (protein)
Unique Ligands	EC4, FMT, GNP, GOL, MG, NA

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2ILP | pdb_00002ilp

2IMA | pdb_00002ima

2IMB | pdb_00002imb

2IMC | pdb_00002imc

4IJH | pdb_00004ijh

4IJL | pdb_00004ijl

4IPC | pdb_00004ipc

4IPD | pdb_00004ipd

4IPG | pdb_00004ipg

4IPH | pdb_00004iph

4LUO | pdb_00004luo

4LUV | pdb_00004luv

4LUZ | pdb_00004luz

4LW1 | pdb_00004lw1

4LWC | pdb_00004lwc

4NYI | pdb_00004nyi

4NYJ | pdb_00004nyj

4NYM | pdb_00004nym

4O0A | pdb_00004o0a

4R4C | pdb_00004r4c

4R4I | pdb_00004r4i

4R4O | pdb_00004r4o

4R4Q | pdb_00004r4q

4R4T | pdb_00004r4t

6BVI | pdb_00006bvi