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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Rothman-Denes, L.B."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Enquatrovirus N4 (3)
	Enterobacteria phage N4 (3)
	Homo sapiens (2)
	synthetic construct (2)
	Haemophilus influenzae (1)

Taxonomy

	Duplodnaviria (6)
	Eukaryota (2)
	other sequences (2)
	Bacteria (1)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

	Protein (9)
	DNA (6)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (4)
	2.0 - 2.5 (4)
	2.5 - 3.0 (1)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (4)
	2015 - 2019 (2)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (6)
	Hydrolases (1)

Symmetry Type

	Asymmetric (7)
	Cyclic (2)

AllSelected

1 to 10 of 10 Structures

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Explore in 3D

3C2P	Download File View File

X-ray crystal structure of the N4 mini-vRNAP P1 promoter complex

Gleghorn, M.L., Murakami, K.S.

(2008) Mol Cell 32: 707-717

Released	2008-12-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Enterobacteria phage N4
Macromolecule	Virion RNA polymerase (protein) P1 Promoter DNA (nucleic acid)

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3C3L	Download File View File

X-ray crystal structure of the N4 mini-vRNAP P2 promoter complex

Gleghorn, M.L., Murakami, K.S.

(2008) Mol Cell 32: 707-717

Released	2008-12-09
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Enterobacteria phage N4
Macromolecule	Virion RNA polymerase (protein) P2 Promoter DNA (nucleic acid)

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3C46	Download File View File

X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2

Gleghorn, M.L., Murakami, K.S.

(2008) Mol Cell 32: 707-717

Released	2008-12-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Enterobacteria phage N4
Macromolecule	Virion RNA polymerase (protein) P2_7a Promoter DNA (nucleic acid)
Unique Ligands	2HP

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3Q22	Download File View File

X-ray crystal structure of the N4 mini-VRNAP and P2_7a promoter transcription initiation complex with GTP and Magnesium: substrate complex I

Gleghorn, M.L., Murakami, K.S.

(2011) Proc Natl Acad Sci U S A 108: 3566-3571

Released	2011-02-16
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Enquatrovirus N4
Macromolecule	Virion RNA polymerase (protein) DNA (5'-D(TPGPCPCPTPCPCPCPAPGPGPCPAPTPCPCPAPAPAPAPGPAPAPGPCPGPGPAPGPCPTPTPCPTPTPC)-3') (nucleic acid)
Unique Ligands	2HP, GTP, MG

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3Q23	Download File View File

X-ray crystal structure of the N4 mini-VRNAP and P2_7a promoter transcription initiation complex with GMPCPP and Manganese: sustrate complex II

Gleghorn, M.L., Murakami, K.S.

(2011) Proc Natl Acad Sci U S A 108: 3566-3571

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Enquatrovirus N4
Macromolecule	Virion RNA polymerase (protein) DNA (5'-D(TPGPCPCPTPCPCPCPAPGPGPCPAPTPCPCPAPAPAPAPGPAPAPGPCPGPGPAPGPCPTPTPCPTPTPC)-3') (nucleic acid)
Unique Ligands	2HP, G2P, MN

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3Q24	Download File View File

X-ray crystal structure of the N4 mini-VRNAP and P2_7a promoter transcription initiation complex with pppGpG and pyrophosphate: product complex

Gleghorn, M.L., Murakami, K.S.

(2011) Proc Natl Acad Sci U S A 108: 3566-3571

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Enquatrovirus N4 synthetic construct
Macromolecule	Virion RNA polymerase (protein) DNA (5'-D(TPGPCPCPTPCPCPCPAPGPGPCPAPTPCPCPAPAPAPAPGPAPAPGPCPGPGPAPGPCPTPTPCPTPTPC)-3') (nucleic acid)
Unique Ligands	2HP, 5GP, GTP, POP

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4DKK	Download File View File

The X-ray Crystal Structure of the Human STAU1 SSM-'RBD'5 Domain-Swapped Dimer

Gleghorn, M.L.

(2013) Nat Struct Mol Biol 20: 515-524

Released	2013-03-20
Method	X-RAY DIFFRACTION 1.701 Å
Organisms	Homo sapiens
Macromolecule	Double-stranded RNA-binding protein Staufen homolog 1 (protein)
Unique Ligands	CL, FLC

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5K8H	Download File View File

The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH

Gleghorn, M.L., Maquat, L.E.

(2016) Nucleic Acids Res 44: 8417-8424

Released	2016-07-06
Method	X-RAY DIFFRACTION 1.069 Å
Organisms	synthetic construct
Macromolecule	RNA 7-mer (nucleic acid)
Unique Ligands	NH4

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6D0Y	Download File View File

X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex

Gleghorn, M.L., Maquat, L.E.

(2018) Genes Dev 32: 555-567

Released	2018-04-25
Method	X-RAY DIFFRACTION 2.676 Å
Organisms	Homo sapiens
Macromolecule	Nuclear cap-binding protein subunit 1 (protein) Nuclear cap-binding protein subunit 2 (protein) Peroxisome proliferator-activated receptor gamma coactivator 1-beta (protein)
Unique Ligands	GTA, MG

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8CWP	Download File View File

X-ray crystal structure of NTHi Protein D bound to a putative glycerol moiety

Jones, S.P., Cook, K.H., Holmquist, M.L., Almekinder, L., DeLaney, A., Labbe, N., Perdue, J., Jackson, N., Charles, R., Pichichero, M., Kaur, R., Michel, L., Gleghorn, M.L.

(2023) Proteins 91: 161-170

Released	2022-09-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Haemophilus influenzae
Macromolecule	Glycerophosphoryl diester phosphodiesterase (protein)
Unique Ligands	GOL, NA

1 to 10 of 10 Structures

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