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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Sainz-Polo, M.A."

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Search Summary

This query matches 22 Structures.

Refinements

Structure Determination Methodology

experimental (22)

Scientific Name of Source Organism

	Paenibacillus barcinonensis (11)
	Bos taurus (4)
	Bacillus subtilis subsp. subtilis str. 168 (2)
	Pseudomonas aeruginosa PAO1 (2)
	Schwanniomyces occidentalis (2)
	Escherichia coli BL21(DE3) (1)
	Saccharomyces cerevisiae S288C (1)

Taxonomy

	Bacteria (15)
	Eukaryota (7)

Experimental Method

X-RAY DIFFRACTION (22)

Polymer Entity Type

Protein (22)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (11)
	2.0 - 2.5 (7)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (7)
	2015 - 2019 (13)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (16)
	Transferases (4)

Symmetry Type

	Asymmetric (19)
	Cyclic (2)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	All beta proteins (2)

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1 to 22 of 22 Structures

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3U14 \| pdb_00003u14	Download File View File

Structure of D50A-fructofuranosidase from Schwanniomyces occidentalis complexed with inulin

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2012) J Biological Chem 287: 19674-19686

Released	2012-04-25
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Schwanniomyces occidentalis
Macromolecule	Fructofuranosidase (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FRU

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3U75 \| pdb_00003u75	Download File View File

Structure of E230A-fructofuranosidase from Schwanniomyces occidentalis complexed with fructosylnystose

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2012) J Biological Chem 287: 19674-19686

Released	2012-04-25
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Schwanniomyces occidentalis
Macromolecule	Fructofuranosidase (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FRU, GLC

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4EQV \| pdb_00004eqv	Download File View File

Structure of Saccharomyces cerevisiae invertase

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2013) J Biological Chem 288: 9755-9766

Released	2013-03-06
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Invertase 2 (protein)

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4QAW \| pdb_00004qaw	Download File View File

Structure of modular Xyn30D from Paenibacillus barcinonensis

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2014) J Biological Chem 289: 31088-31101

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Xyn30D (protein)
Unique Ligands	CA

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4QB1 \| pdb_00004qb1	Download File View File

Structure of CBM35 from Paenibacillus barcinonensis

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2014) J Biological Chem 289: 31088-31101

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Xyn30D (protein)
Unique Ligands	CA, GOL

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4QB2 \| pdb_00004qb2	Download File View File

Structure of CBM35 in complex with glucuronic acid

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2014) J Biological Chem 289: 31088-31101

Released	2014-10-08
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Xyn30D (protein)
Unique Ligands	BDP, CA, GCU

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4QB6 \| pdb_00004qb6	Download File View File

Structure of CBM35 in complex with aldouronic acid

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2014) J Biological Chem 289: 31088-31101

Released	2014-10-08
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Xyn30D (protein)
Unique Ligands	CA
Unique branched monosaccharides	GCU, XYP

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4W8L \| pdb_00004w8l	Download File View File

Structure of GH10 from Paenibacillus barcinonensis

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA, GOL

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4XUN \| pdb_00004xun	Download File View File

Structure of the CBM22-2 xylan-binding domain from Paenibacillus barcinonensis Xyn10C

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA

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4XUO \| pdb_00004xuo	Download File View File

Structure of the CBM22-1 xylan-binding domain from Paenibacillus barcinonensis Xyn10C

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA

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4XUP \| pdb_00004xup	Download File View File

Structure of the N-terminal CBM22-1-CBM22-2 tandem domain from Paenibacillus barcinonensis Xyn10C

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 2.43 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA, GOL

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4XUQ \| pdb_00004xuq	Download File View File

Structure of the CBM22-2 xylan-binding domain from Paenibacillus barcinonensis Xyn10C in complex with xylotriose

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA, XYP
Unique branched monosaccharides	XYP

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4XUR \| pdb_00004xur	Download File View File

Structure of the CBM22-2 xylan-binding domain from Paenibacillus barcinonensis Xyn10C in complex with xylotetraose

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA, XYP
Unique branched monosaccharides	XYP

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4XUT \| pdb_00004xut	Download File View File

Structure of the CBM22-2 xylan-binding domain in complex with 1,3:1,4 Beta-glucotetraose B from Paenibacillus barcinonensis Xyn10C

Sainz-Polo, M.A., Sanz-Aparicio, J.

(2015) J Biological Chem 290: 17116-17130

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Paenibacillus barcinonensis
Macromolecule	Endo-1,4-beta-xylanase C (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC

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5NR9 \| pdb_00005nr9	Download File View File

A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (alpha-3GalT) Supports a Conserved Reaction Mechanism for Retaining Glycosyltransferases - Unliganded alpha-3GalT

Albesa-Jove, D., Marina, A., Sainz-Polo, M.A., Guerin, M.E.

(2017) Angew Chem Int Ed Engl 56: 14853-14857

Released	2017-10-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bos taurus
Macromolecule	N-acetyllactosaminide alpha-1,3-galactosyltransferase (protein)
Unique Ligands	GOL

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5NRB \| pdb_00005nrb	Download File View File

A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (a-3GalT) Supports a Conserved Reaction Mechanism for Retaining Glycosyltransferases - alpha-3GalT in complex with Co2+, UDP-Gal and lactose - a3GalT-Co2+-UDP-Gal-LAT-1

Albesa-Jove, D., Marina, A., Sainz-Polo, M.A., Guerin, M.E.

(2017) Angew Chem Int Ed Engl 56: 14853-14857

Released	2017-10-11
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Bos taurus
Macromolecule	N-acetyllactosaminide alpha-1,3-galactosyltransferase (protein)
Unique Ligands	CO, GDU
Unique branched monosaccharides	BGC, GAL

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5NRD \| pdb_00005nrd	Download File View File

A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (a-3GalT) Supports a Conserved Reaction Mechanism for Retaining Glycosyltransferases - alpha-3GalT in complex with Co2+, UDP-Gal and lactose - a3GalT-Co2+-UDP-Gal-LAT-2

Albesa-Jove, D., Marina, A., Sainz-Polo, M.A., Guerin, M.E.

(2017) Angew Chem Int Ed Engl 56: 14853-14857

Released	2017-10-11
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Bos taurus
Macromolecule	N-acetyllactosaminide alpha-1,3-galactosyltransferase (protein)
Unique Ligands	CO, GDU, GOL
Unique branched monosaccharides	BGC, GAL

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5NRE \| pdb_00005nre	Download File View File

A Native Ternary Complex of Alpha-1,3-Galactosyltransferase (a3GalT) Supports a Conserved Reaction Mechanism for Retaining Glycosyltransferases - a3GalT in complex with lactose - a3GalT-LAT

Albesa-Jove, D., Marina, A., Sainz-Polo, M.A., Guerin, M.E.

(2017) Angew Chem Int Ed Engl 56: 14853-14857

Released	2017-10-11
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Bos taurus
Macromolecule	N-acetyllactosaminide alpha-1,3-galactosyltransferase (protein)
Unique branched monosaccharides	BGC, GAL

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6H8L \| pdb_00006h8l	Download File View File

Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis

Sainz-Polo, M.A., Grifoll-Romero, L., Albesa-Jove, D., Planas, A., Guerin, M.E.

(2019) J Biological Chem 294: 19066-19080

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	Peptidoglycan-N-acetylmuramic acid deacetylase PdaC (protein)
Unique Ligands	TLA, ZN

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6H8N \| pdb_00006h8n	Download File View File

Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis - mutant D285S

Sainz-Polo, M.A., Grifoll-Romero, L., Albesa-Jove, D., Planas, A., Guerin, M.E.

(2019) J Biological Chem 294: 19066-19080

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.26 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	Peptidoglycan-N-acetylmuramic acid deacetylase PdaC (protein)
Unique Ligands	GOL, PO4, ZN

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6TE4 \| pdb_00006te4	Download File View File

Structural insights into Pseudomonas aeruginosa Type six secretion system exported effector 8: Tse8 in complex with a peptide

Sainz-Polo, M.A., Capuni, R., Lucas, M., Altuna, J., Fucini, P., Montanchez, I., Albesa-Jove, D.

(2020) J Struct Biol 212: 107651-107651

Released	2020-11-04
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Escherichia coli BL21(DE3) Pseudomonas aeruginosa PAO1
Macromolecule	Pro-Pro-Leu-Ala-Ser-Lys (protein) Tse8 (protein)