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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Sedore, S.C."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Trypanosoma brucei brucei (7)
	Trypanosoma brucei (2)
	Severe acute respiratory syndrome coronavirus 2 (1)

Taxonomy

	Eukaryota (9)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (7)
	2.0 - 2.5 (1)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (7)
	2020 - 2024 (1)

Enzyme Classification Name

	Hydrolases (1)
	Oxidoreductases (3)
	Transferases (1)

Symmetry Type

	Dihedral (9)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a/b) (9)
	All beta proteins (1)

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1 to 10 of 10 Structures

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2YHI \| pdb_00002yhi	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor WH16

Nerini, E., Dawson, A., Hunter, W.N., Costi, M.P.

(2017) ACS Omega 2: 5666-5683

Released	2012-05-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Trypanosoma brucei
Macromolecule	PTERIDINE REDUCTASE, PUTATIVE (protein)
Unique Ligands	ACT, DTT, DTU, DTV, NAP, W16

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2YHU \| pdb_00002yhu	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor WHF30

Nerini, E., Dawson, A., Hunter, W.N., Costi, M.P.

(2017) ACS Omega 2: 5666-5683

Released	2012-05-23
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Trypanosoma brucei
Macromolecule	PTERIDINE REDUCTASE (protein)
Unique Ligands	ACT, NDP, WHF

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4WCD \| pdb_00004wcd	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor 10

Mangani, S., Di Pisa, F., Pozzi, C.

(2017) ACS Omega 2: 5666-5683

Released	2015-09-30
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	3KH, ACT, GOL, NAP

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4WCF \| pdb_00004wcf	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor 9

Mangani, S., Di Pisa, F., Pozzi, C.

(2017) ACS Omega 2: 5666-5683

Released	2015-09-23
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	3KN, ACT, GOL, NAP

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5IZC \| pdb_00005izc	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor F032

Pozzi, C., Landi, G., Di Pisa, F., Mangani, S.

(2017) ACS Omega 2: 5666-5683

Released	2017-04-05
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	6F4, ACT, GOL, NAP

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5JCJ \| pdb_00005jcj	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor NMT-H037 (compound 7)

Landi, G., Pozzi, C., Di Pisa, F., Dello Iacono, L., Mangani, S.

(2016) J Med Chem 59: 7598-7616

Released	2016-08-17
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	6JM, ACT, NAP

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5JCX \| pdb_00005jcx	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor NP-29

Landi, G., Pozzi, C., Di Pisa, F., Dello Iacono, L., Mangani, S.

(2016) J Med Chem 59: 7598-7616

Released	2016-08-17
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	ACT, CC6, GOL, NAP

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5JDC \| pdb_00005jdc	Download File View File

Trypanosoma brucei PTR1 in complex with inhibitor NP-13 (Hesperetin)

Mangani, S., Pozzi, C., Di Pisa, F., Landi, G., Dello Iacono, L.

(2016) J Med Chem 59: 7598-7616

Released	2016-08-17
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	6JP, ACT, GOL, NAP

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5JDI \| pdb_00005jdi	Download File View File

Trypanosoma brucei PTR1 in complex with cofactor and inhibitor NMT-H024 (compound 2)

Landi, G., Pozzi, C., Di Pisa, F., Dello lacono, L., Mangani, S.

(2016) J Med Chem 59: 7598-7616

Released	2016-08-17
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	Pteridine reductase (protein)
Unique Ligands	6JO, ACT, NAP

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7B3E \| pdb_00007b3e	Download File View File

Crystal structure of myricetin covalently bound to the main protease (3CLpro/Mpro) of SARS-CoV-2

Costanzi, E., Demitri, N., Giabbai, B., Storici, P.

(2021) Acs Pharmacol Transl Sci 4: 1096-1110

Released	2021-01-13
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	Main Protease (protein)
Unique Ligands	CL, EDO, MYC, NA

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2YHI | pdb_00002yhi

Trypanosoma brucei PTR1 in complex with inhibitor WH16

2YHU | pdb_00002yhu

Trypanosoma brucei PTR1 in complex with inhibitor WHF30

4WCD | pdb_00004wcd

Trypanosoma brucei PTR1 in complex with inhibitor 10

4WCF | pdb_00004wcf

Trypanosoma brucei PTR1 in complex with inhibitor 9

5IZC | pdb_00005izc

Trypanosoma brucei PTR1 in complex with inhibitor F032

5JCJ | pdb_00005jcj

Trypanosoma brucei PTR1 in complex with inhibitor NMT-H037 (compound 7)

5JCX | pdb_00005jcx

Trypanosoma brucei PTR1 in complex with inhibitor NP-29

5JDC | pdb_00005jdc

Trypanosoma brucei PTR1 in complex with inhibitor NP-13 (Hesperetin)

5JDI | pdb_00005jdi

Trypanosoma brucei PTR1 in complex with cofactor and inhibitor NMT-H024 (compound 2)

7B3E | pdb_00007b3e

Crystal structure of myricetin covalently bound to the main protease (3CLpro/Mpro) of SARS-CoV-2

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2YHI | pdb_00002yhi

2YHU | pdb_00002yhu

4WCD | pdb_00004wcd

4WCF | pdb_00004wcf

5IZC | pdb_00005izc

5JCJ | pdb_00005jcj

5JCX | pdb_00005jcx

5JDC | pdb_00005jdc

5JDI | pdb_00005jdi

7B3E | pdb_00007b3e