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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Shen, D."

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Search Summary

This query matches 3 Structures.

Refinements

Structure Determination Methodology

experimental (3)

Scientific Name of Source Organism

Oryctolagus cuniculus (3)

Taxonomy

Eukaryota (3)

Experimental Method

ELECTRON MICROSCOPY (3)

Polymer Entity Type

	Protein (3)
	RNA (3)

Refinement Resolution (Å)

	3.0 - 3.5 (1)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

2020 - 2024 (3)

Enzyme Classification Name

Lyases (3)

Symmetry Type

Asymmetric (3)

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7NWG	Download File View File

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Powers, K.T., Yadav, S.K.N., Bufton, J.C., Schaffitzel, C.

(2021) Nucleic Acids Res 49: 7665-7679

Released	2021-07-07
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Unique protein chains: 79 Unique nucleic acid chains: 7
Unique Ligands	BLS, MG, ZN

Explore in 3D

7NWH	Download File View File

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Powers, K.T., Yadav, S.K.N., Bufton, J.C., Schaffitzel, C.

(2021) Nucleic Acids Res 49: 7665-7679

Released	2021-07-07
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Unique protein chains: 79 Unique nucleic acid chains: 5
Unique Ligands	BLS, GCP, MG, ZN

Explore in 3D

7NWI	Download File View File

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Powers, K.T., Yadav, S.K.N., Bufton, J.C., Schaffitzel, C.

(2021) Nucleic Acids Res 49: 7665-7679

Released	2021-07-07
Method	ELECTRON MICROSCOPY 3.13 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Unique protein chains: 78 Unique nucleic acid chains: 6
Unique Ligands	BLS, MG, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

7NWG

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

7NWH

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

7NWI

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S