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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Skaar, E.P."

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Search Summary

This query matches 20 Structures.

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Structure Determination Methodology

experimental (20)

Scientific Name of Source Organism

	Staphylococcus aureus subsp. aureus N315 (7)
	Homo sapiens (5)
	Staphylococcus aureus (4)
	Staphylococcus aureus subsp. aureus MW2 (2)
	Acinetobacter baumannii (1)
	Bacteroides thetaiotaomicron (1)
	Escherichia coli (1)
	Mus musculus (1)

Taxonomy

	Bacteria (16)
	Eukaryota (6)

Experimental Method

	X-RAY DIFFRACTION (19)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (20)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (11)
	2.0 - 2.5 (2)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (2)
	2010 - 2014 (9)
	2015 - 2019 (1)
	2020 - 2024 (6)

Enzyme Classification Name

	Oxidoreductases (6)
	Transferases (5)
	Hydrolases (1)
	Lyases (1)

Symmetry Type

	Asymmetric (7)
	Cyclic (13)

SCOP Classification

	Artifacts (12)
	Alpha and beta proteins (a+b) (11)
	All beta proteins (4)
	All alpha proteins (2)

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1 to 20 of 20 Structures

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1SQE \| pdb_00001sqe	Download File View File

1.5A Crystal Structure Of the protein PG130 from Staphylococcus aureus, Structural genomics

Zhang, R., Wu, R., Joachimiak, G., Schneewind, O., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2005) J Biological Chem 280: 2840-2846

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Staphylococcus aureus
Macromolecule	hypothetical protein PG130 (protein)

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1XBW \| pdb_00001xbw	Download File View File

1.9A Crystal Structure of the protein isdG from Staphylococcus aureus aureus, Structural genomics, MCSG

Zhang, R., Wu, R., Joachimiak, G., Schneewind, O., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2005) J Biological Chem 280: 2840-2846

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Staphylococcus aureus subsp. aureus MW2
Macromolecule	hypothetical protein isdG (protein)

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2ZDO \| pdb_00002zdo	Download File View File

Crystal structure of IsdG-N7A in complex with hemin

Lee, W.C., Reniere, M.L., Skaar, E.P., Murphy, M.E.P.

(2008) J Biological Chem 283: 30957-30963

Released	2008-08-19
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus
Macromolecule	Heme-degrading monooxygenase isdG (protein)
Unique Ligands	HEM

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2ZDP \| pdb_00002zdp	Download File View File

Crystal structure of IsdI in complex with Cobalt protoporphyrin IX

Lee, W.C., Reniere, M.L., Skaar, E.P., Murphy, M.E.P.

(2008) J Biological Chem 283: 30957-30963

Released	2008-08-19
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Staphylococcus aureus
Macromolecule	Heme-degrading monooxygenase isdI (protein)
Unique Ligands	CL, COH

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3LGM \| pdb_00003lgm	Download File View File

Crystal structure of reduced IsdI in complex with heme

Ukpabi, G.N., Murphy, M.E.P.

(2010) Mol Microbiol 75: 1529-1538

Released	2010-03-09
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Heme-degrading monooxygenase isdI (protein)
Unique Ligands	HEM, MG

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3LGN \| pdb_00003lgn	Download File View File

Crystal structure of IsdI in complex with heme

Ukpabi, G.N., Murphy, M.E.P.

(2010) Mol Microbiol 75: 1529-1538

Released	2010-03-09
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Heme-degrading monooxygenase isdI (protein)
Unique Ligands	HEM, MG, OXY

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3SZK \| pdb_00003szk	Download File View File

Crystal Structure of Human metHaemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus

Jacques, D.A., Kumar, K.K., Guss, J.M., Gell, D.A.

(2011) J Biological Chem 286: 38439-38447

Released	2011-09-14
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Homo sapiens Staphylococcus aureus subsp. aureus MW2
Macromolecule	Hemoglobin subunit alpha (protein) Hemoglobin subunit beta (protein) Iron-regulated surface determinant protein H (protein)
Unique Ligands	HEM

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4GGF \| pdb_00004ggf	Download File View File

Crystal structure of Mn2+ bound calprotectin

Damo, S.M., Fritz, G.

(2013) Proc Natl Acad Sci U S A 110: 3841-3846

Released	2013-02-20
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Protein S100-A8 (protein) Protein S100-A9 (protein)
Unique Ligands	CA, GOL, MN, SO4

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4NAY \| pdb_00004nay	Download File View File

Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.42 Angstrom Resolution - SAD Phasing

Thompson, M.K., Goodman, M.C., Jagessar, K., Harp, J., Keithly, M.E., Cook, P.D., Armstrong, R.N.

(2014) Biochemistry 53: 755-765

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Metallothiol transferase FosB (protein)
Unique Ligands	SO4, ZN

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4NAZ \| pdb_00004naz	Download File View File

Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.15 Angstrom Resolution

Thompson, M.K., Goodman, M.C., Jagessar, K., Harp, J., Keithly, M.E., Cook, P.D., Armstrong, R.N.

(2014) Biochemistry 53: 755-765

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Metallothiol transferase FosB (protein)
Unique Ligands	GOL, SO4, ZN

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4NB0 \| pdb_00004nb0	Download File View File

Crystal Structure of FosB from Staphylococcus aureus with BS-Cys9 disulfide at 1.62 Angstrom Resolution

Thompson, M.K., Goodman, M.C., Jagessar, K., Harp, J., Keithly, M.E., Cook, P.D., Armstrong, R.N.

(2014) Biochemistry 53: 755-765

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.62 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Metallothiol transferase FosB (protein)
Unique Ligands	CYS, GOL, SO4

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4NB1 \| pdb_00004nb1	Download File View File

Crystal Structure of FosB from Staphylococcus aureus at 1.80 Angstrom Resolution with L-Cysteine-Cys9 Disulfide

Cook, P.D., Thompson, M.K., Goodman, M.C., Jagessar, K., Harp, J., Keithly, M.E., Armstrong, R.N.

(2014) Biochemistry 53: 755-765

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Metallothiol transferase FosB (protein)
Unique Ligands	CYS, SO4

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4NB2 \| pdb_00004nb2	Download File View File

Crystal Structure of FosB from Staphylococcus aureus at 1.89 Angstrom Resolution - Apo structure

Cook, P.D., Thompson, M.K., Goodman, M.C., Jagessar, K., Harp, J., Keithly, M.E., Armstrong, R.N.

(2014) Biochemistry 53: 755-765

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Metallothiol transferase FosB (protein)
Unique Ligands	SO4

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6MNZ \| pdb_00006mnz	Download File View File

Crystal structure of RibBX, a two domain 3,4-dihydroxy-2-butanone 4-phosphate synthase from A. baumannii.

Wang, J., Gonzalez-Gutierrez, G., Giedroc, D.P.

(2019) Cell Chem Biol 26: 745

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.66 Å
Organisms	Acinetobacter baumannii
Macromolecule	3,4-dihydroxy-2-butanone 4-phosphate synthase (protein)
Unique Ligands	CL, SO4

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6P9H \| pdb_00006p9h	Download File View File

Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain

Dong, J., Crowe, J.E.

(2019) mBio 10:

Released	2020-06-17
Method	X-RAY DIFFRACTION 3.003 Å
Organisms	Homo sapiens Staphylococcus aureus
Macromolecule	Human anti staphylococcus aureus antibody STAU-281 Fab heavy chain (protein) Human anti staphylococcus aureus antibody STAU-281 Fab light chain (protein) Iron-regulated heme-iron binding protein (protein)

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6P9I \| pdb_00006p9i	Download File View File

crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab

Dong, J., Crowe, J.E.

(2019) mBio 10:

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	human anti staphylococcus aureus antibody STAU-399 Fab heavy chain (protein) human anti staphylococcus aureus antibody STAU-399 Fab light chain (protein)

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6P9J \| pdb_00006p9j	Download File View File

crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab

Dong, J., Crowe, J.E.

(2019) mBio 10:

Released	2020-06-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	human anti staphylococcus aureus antibody STAU-229 Fab heavy chain (protein) human anti staphylococcus aureus antibody STAU-229 Fab light chain (protein)
Unique Ligands	TAM

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6VRI \| pdb_00006vri	Download File View File

Crystal Structure of the wtBlc-split Protein

Bozhanova, N.G., Meiler, J.

(2021) FEBS Lett 595: 206-219

Released	2020-12-02
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Escherichia coli
Macromolecule	Outer membrane lipoprotein Blc (protein)
Unique Ligands	HEM, SO4

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7SEK \| pdb_00007sek	Download File View File

Solution structure of the zinc finger domain of murine MetAP1, complexed with ZNG N-terminal peptide

Edmonds, K.A., Jordan, M.R., Thalluri, K., Wu, H., Di Marchi, R., Giedroc, D.P.

(2022) Cell 185: 2148

Released	2022-06-01
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	COBW domain-containing protein 1,Methionine aminopeptidase 1 fusion (protein)
Unique Ligands	ZN

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8GEX \| pdb_00008gex	Download File View File

Crystal structure of the ferric enterobactin transporter (XusB) from Bacteroides thetaiotaomicron

Perera, Y.R., Chazin, W.J.

(2023) Cell Host Microbe 31: 1639-1654.e10

Released	2023-08-02
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	DUF4374 domain-containing protein (protein)

1 to 20 of 20 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1SQE | pdb_00001sqe

1.5A Crystal Structure Of the protein PG130 from Staphylococcus aureus, Structural genomics

1XBW | pdb_00001xbw

1.9A Crystal Structure of the protein isdG from Staphylococcus aureus aureus, Structural genomics, MCSG

2ZDO | pdb_00002zdo

Crystal structure of IsdG-N7A in complex with hemin

2ZDP | pdb_00002zdp

Crystal structure of IsdI in complex with Cobalt protoporphyrin IX

3LGM | pdb_00003lgm

Crystal structure of reduced IsdI in complex with heme

3LGN | pdb_00003lgn

Crystal structure of IsdI in complex with heme

3SZK | pdb_00003szk

Crystal Structure of Human metHaemoglobin Complexed with the First NEAT Domain of IsdH from Staphylococcus aureus

4GGF | pdb_00004ggf

Crystal structure of Mn2+ bound calprotectin

4NAY | pdb_00004nay

Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.42 Angstrom Resolution - SAD Phasing

4NAZ | pdb_00004naz

Crystal Structure of FosB from Staphylococcus aureus with Zn and Sulfate at 1.15 Angstrom Resolution

4NB0 | pdb_00004nb0

Crystal Structure of FosB from Staphylococcus aureus with BS-Cys9 disulfide at 1.62 Angstrom Resolution

4NB1 | pdb_00004nb1

Crystal Structure of FosB from Staphylococcus aureus at 1.80 Angstrom Resolution with L-Cysteine-Cys9 Disulfide

4NB2 | pdb_00004nb2

Crystal Structure of FosB from Staphylococcus aureus at 1.89 Angstrom Resolution - Apo structure

6MNZ | pdb_00006mnz

Crystal structure of RibBX, a two domain 3,4-dihydroxy-2-butanone 4-phosphate synthase from A. baumannii.

6P9H | pdb_00006p9h

Crystal structure of human anti staphylococcus aureus antibody STAU-281 Fab in complex with IsdB NEAT2 domain

6P9I | pdb_00006p9i

crystal structure of human anti staphylococcus aureus antibody STAU-399 Fab

6P9J | pdb_00006p9j

crystal structure of human anti staphylococcus aureus antibody STAU-229 Fab

6VRI | pdb_00006vri

Crystal Structure of the wtBlc-split Protein

7SEK | pdb_00007sek

Solution structure of the zinc finger domain of murine MetAP1, complexed with ZNG N-terminal peptide

8GEX | pdb_00008gex

Crystal structure of the ferric enterobactin transporter (XusB) from Bacteroides thetaiotaomicron

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1SQE | pdb_00001sqe

1XBW | pdb_00001xbw

2ZDO | pdb_00002zdo

2ZDP | pdb_00002zdp

3LGM | pdb_00003lgm

3LGN | pdb_00003lgn

3SZK | pdb_00003szk

4GGF | pdb_00004ggf

4NAY | pdb_00004nay

4NAZ | pdb_00004naz

4NB0 | pdb_00004nb0

4NB1 | pdb_00004nb1

4NB2 | pdb_00004nb2

6MNZ | pdb_00006mnz

6P9H | pdb_00006p9h

6P9I | pdb_00006p9i

6P9J | pdb_00006p9j

6VRI | pdb_00006vri

7SEK | pdb_00007sek

8GEX | pdb_00008gex