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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Strobel, S.A."

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Search Summary

This query matches 44 Structures.

Refinements

Structure Determination Methodology

experimental (44)

Scientific Name of Source Organism

	Homo sapiens (23)
	Haloarcula marismortui (13)
	synthetic construct (6)
	Pseudomonas aeruginosa (2)
	Thermoanaerobacter mathranii (2)
	Clostridium acetobutylicum (1)
	Fusobacterium polymorphum (1)
	Sulfobacillus acidophilus DSM 10332 (1)
	Vibrio cholerae (1)

Taxonomy

	Eukaryota (23)
	Archaea (13)
	Bacteria (8)
	other sequences (6)

Experimental Method

	X-RAY DIFFRACTION (43)
	SOLUTION NMR (1)

Polymer Entity Type

	RNA (42)
	Protein (36)
	DNA (2)
	NA-hybrid (2)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (12)
	2.5 - 3.0 (13)
	3.0 - 3.5 (14)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (25)
	2010 - 2014 (12)
	2015 - 2019 (5)

Symmetry Type

Asymmetric (36)

SCOP Classification

	Alpha and beta proteins (a+b) (27)
	All beta proteins (13)
	Alpha and beta proteins (a/b) (13)
	Small proteins (13)
	All alpha proteins (13)
	Peptides (13)

AllSelected

1 to 25 of 44 Structures

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1KQS	Download File View File

The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis

Schmeing, T.M., Seila, A.C., Hansen, J.L., Freeborn, B., Soukup, J.K., Scaringe, S.A., Strobel, S.A., Moore, P.B., Steitz, T.A.

(2002) Nat Struct Biol 9: 225-230

Released	2002-02-22
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 28 Unique nucleic acid chains: 4
Unique Ligands	ACA, BTN, CD, CL, K, MG, NA, PHA, PPU

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1U6B	Download File View File

CRYSTAL STRUCTURE OF A SELF-SPLICING GROUP I INTRON WITH BOTH EXONS

Adams, P.L., Stahley, M.R., Kosek, A.B., Wang, J., Strobel, S.A.

(2004) Nature 430: 45-50

Released	2004-08-10
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) 197-MER (nucleic acid) 5'-R(APAPGPCPCPAPCPAPCPAPAPAPCPCPAPGPAPCPGP GPCPC)-3' (nucleic acid) 5'-R(CPAP*(5MU))-3' (nucleic acid)
Unique Ligands	K, MG

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1VQ4	Download File View File

The structure of the transition state analogue "DAA" bound to the large ribosomal subunit of Haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA

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1VQ5	Download File View File

The structure of the transition state analogue "RAA" bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA

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1VQ6	Download File View File

The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Nature 438: 520-524

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 4
Unique Ligands	CD, CL, K, MG, NA

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1VQ7	Download File View File

The structure of the transition state analogue "DCA" bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Nature 438: 520-524

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA

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1VQ8	Download File View File

The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SPS, SR

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1VQ9	Download File View File

The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SPS, SR

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1VQK	Download File View File

The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

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1VQL	Download File View File

The structure of the transition state analogue "DCSN" bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

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1VQM	Download File View File

The structure of the transition state analogue "DAN" bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

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1VQN	Download File View File

The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Nature 438: 520-524

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 4
Unique Ligands	CD, CL, K, MG, NA, SR

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1VQO	Download File View File

The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

Explore in 3D

1VQP	Download File View File

The structure of the transition state analogue "RAP" bound to the large ribosomal subunit of haloarcula marismortui

Schmeing, T.M., Steitz, T.A.

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

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1ZZN	Download File View File

Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.

Stahley, M.R., Strobel, S.A.

(2005) Science 309: 1587-1590

Released	2005-08-30
Method	X-RAY DIFFRACTION 3.37 Å
Organisms	Homo sapiens
Macromolecule	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A RNA BINDING DOMAIN (protein) 197-MER (nucleic acid) 5'-R(APAPGPCPCPAPCPAPCPAPAPAPCPCPAPGPAPCPGPGPCPC)-3' (nucleic acid) 5'-R(CPAP*(5MU))-3' (nucleic acid)
Unique Ligands	K, MG

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2AKG	Download File View File

Thallium form of the G-Quadruplex from Oxytricha Nova, d(G4T4G4)2

Gill, M.L., Strobel, S.A., Loria, J.P.

(2005) J Am Chem Soc 127: 16723-16732

Released	2005-11-08
Method	SOLUTION NMR
Macromolecule	5'-D(GPGPGPGPTPTPTPTPGPGPGPG)-3' (nucleic acid)

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2HBN	Download File View File

Crystallization of the Tl+-form of the Oxytricha nova G-quadruplex

Gill, M.L., Strobel, S.A., Loria, J.P.

(2006) Nucleic Acids Res 34: 4506-4514

Released	2006-09-19
Method	X-RAY DIFFRACTION 1.55 Å
Macromolecule	5'-D(GPGPGPGPTPTPTPTPGPGPGPG)-3' (nucleic acid)
Unique Ligands	TL

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2NZ4	Download File View File

Structural investigation of the GlmS ribozyme bound to its catalytic cofactor

Cochrane, J.C.

(2007) Chem Biol 14: 97-105

Released	2007-01-16
Method	X-RAY DIFFRACTION 2.498 Å
Organisms	Homo sapiens
Macromolecule	U1 Small Nuclear Ribonucleoprotein A (protein) GlmS ribozyme (nucleic acid) substrate strand RNA 13-mer (nucleic acid)
Unique Ligands	GLP, MG

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3BO2	Download File View File

A relaxed active site following exon ligation by a group I intron

Lipchock, S.V., Strobel, S.A.

(2008) Proc Natl Acad Sci U S A 105: 5699-5704

Released	2008-04-01
Method	X-RAY DIFFRACTION 3.31 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) Group I intron P9 (nucleic acid) RNA (5'-R(APAPGPCPCPAPCPAPCPAPAPAPCPCPAPG)-3') (nucleic acid) RNA (5'-R(APCPGPGPCPC)-3') (nucleic acid) RNA (5'-R(CPAP*U)-3') (nucleic acid)
Unique Ligands	MG

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3BO3	Download File View File

A relaxed active site following exon ligation by a group I intron

Lipchock, S.V., Strobel, S.A.

(2008) Proc Natl Acad Sci U S A 105: 5699-5704

Released	2008-04-01
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) Group I intron P9 (nucleic acid) RNA (5'-R(APAPGPCPCPAPCPAPCPAPAPAPCPCPAPG)-3') (nucleic acid) RNA (5'-R(CPAPUPAPCPGPGPCP*C)-3') (nucleic acid)
Unique Ligands	K, MG

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3BO4	Download File View File

A relaxed active site following exon ligation by a group I intron

Lipchock, S.V., Strobel, S.A.

(2008) Proc Natl Acad Sci U S A 105: 5699-5704

Released	2008-04-01
Method	X-RAY DIFFRACTION 3.33 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) Group I intron P9 (nucleic acid) DNA/RNA (5'-R(APAPGPCPCPAPCPAPCPAPAPAPCPCPA)-D(PDG)-3') (hybrid) DNA/RNA (5'-R(CPA)-D(PDU)-R(PAPCPGPGPCP*C)-3') (hybrid)
Unique Ligands	K, MG

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3G8S	Download File View File

Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme

Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.

(2009) Biochemistry 48: 3239-3246

Released	2009-11-03
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A (protein) GLMS RIBOZYME (nucleic acid) RNA (5'-R(AP(A2M)PGPCPGPCPCPAPGPAPAPCP*U)-3') (nucleic acid)
Unique Ligands	MG

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3G8T	Download File View File

Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6P

Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.

(2009) Biochemistry 48: 3239-3246

Released	2009-11-03
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) RNA (5'-R(AP(A2M)PGPCPGPCPCPAPGPAPAPCP*U)-3') (nucleic acid) glmS glucosamine-6-phosphate activated ribozyme (nucleic acid)
Unique Ligands	GLP, MG

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3G96	Download File View File

Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P

Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.

(2009) Biochemistry 48: 3239-3246

Released	2009-11-03
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A (protein) GLMS RIBOZYME (nucleic acid) RNA (5'-R(AP(A2M)PGPCPGPCPCPAPGPAPAPCP*U)-3') (nucleic acid)
Unique Ligands	6MN, MG

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3G9C	Download File View File

Crystal structure of the product Bacillus anthracis glmS ribozyme

Strobel, S.A., Cochrane, J.C., Lipchock, S.V., Smith, K.D.

(2009) Biochemistry 48: 3239-3246

Released	2009-11-03
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	U1 small nuclear ribonucleoprotein A (protein) GLMS RIBOZYME (nucleic acid) RNA (5'-R(GPCPGPCPCPAPGPAPAPCP*U)-3') (nucleic acid)
Unique Ligands	GLP, MG

1 to 25 of 44 Structures

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