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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

QUERY: Chemical ID(s) = 1FZ

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This query matches 27 Structures.

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4IR1	Download File View File

Polymerase-DNA Complex

Sharma, A., Nair, D.T.

(2013) Nucleic Acids Res 41: 5104-5114

Released	2013-04-10
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Escherichia coli K-12
Macromolecule	DNA polymerase IV (protein) DNA (5'-D(CPTPAPGPGPGPTPCPCPTPAPGPGPAPCPCPC)-3') (nucleic acid) DNA (5'-D(GPGPGPTPCPCPTPAPGPGPAPCPCPC)-3') (nucleic acid) DNA (5'-D(TPCPTPAPGPGPGPTPCPCPTPAPGPGPAPCPCP*C)-3') (nucleic acid)
Unique Ligands	1FZ, MG

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4MFF	Download File View File

Structure of human DNA polymerase beta complexed with O6MG in the template base paired with incoming non-hydrolyzable TTP

Koag, M.C., Min, K., Monzingo, A.F., Lee, S.

(2014) J Am Chem Soc 136: 5709-5721

Released	2014-04-16
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) dn primer (nucleic acid) template (nucleic acid) up primer (nucleic acid)
Unique Ligands	1FZ, MG, NA

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4NXZ	Download File View File

DNA polymerase beta with O6mG in the template base opposite to incoming non-hydrolyzable TTP with manganese in the active site

Koag, M.-C., Min, K., Monzingo, A.F., Lee, S.

(2014) J Am Chem Soc 136: 5709-5721

Released	2014-04-16
Method	X-RAY DIFFRACTION 2.557 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) 5'-D(CPCPGPAPCP(6OG)PTPCPGPCPAPTPCPAPGPC)-3' (nucleic acid) 5'-D(GPCPTPGPAPTPGPCPGPA)-3' (nucleic acid) 5'-D(PGPTPCPGP*G)-3' (nucleic acid)
Unique Ligands	1FZ, MN, NA

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4O5E	Download File View File

Structure of human DNA polymerase complexed with N7MG in the template base paired with incoming non-hydrolyzable TTP

Koag, M.C., Lee, S.

(2014) Nucleic Acids Res 42: 8755-8766

Released	2014-07-02
Method	X-RAY DIFFRACTION 2.532 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCP(FMG)PTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MG, NA

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4P2H	Download File View File

Structure of human DNA polymerase complexed with N7MG in the template opposite to incoming non-hydrolyzable TTP with manganese in the active site

Lee, S., Koag, M.C.

(2014) Nucleic Acids Res 42: 8755-8766

Released	2014-06-25
Method	X-RAY DIFFRACTION 1.987 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCP(FMG)PTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MN, NA

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4PGQ	Download File View File

Structure of human DNA polymerase beta complexed with G in the template base paired with incoming non-hydrolyzable TTP

Koag, M.C., Lee, S.

(2015) Nucleic Acids Res 42: 11233-11245

Released	2014-10-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCPGPTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MG, NA

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4PGX	Download File View File

Structure of human DNA polymerase beta complexed with G in the template base paired with incoming non-hydrolyzable TTP and MANGANESE

Koag, M.C., Lee, S.

(2015) Nucleic Acids Res 42: 11233-11245

Released	2014-09-24
Method	X-RAY DIFFRACTION 2.077 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCPGPTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MN, NA

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4Q44	Download File View File

Polymerase-Damaged DNA Complex

Nair, D.T., Kottur, J., Sharma, A.

(2015) Structure 23: 56-67

Released	2015-05-06
Method	X-RAY DIFFRACTION 2.71 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	DNA polymerase IV (protein) DNA (5'-D(TPCPTPAP(RDG)PGPGPTPCPCPTPAPGPGPAPCPCPC)-3') (nucleic acid)
Unique Ligands	1FZ, MG

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4Q45	Download File View File

DNA Polymerase- damaged DNA complex

Kottur, J., Sharma, A., Nair, D.T.

(2015) Structure 23: 56-67

Released	2015-05-06
Method	X-RAY DIFFRACTION 2.176 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	DNA polymerase IV (protein) DNA (5'-D(TPCPTPAGPGPGPTPCPCPTPAPGPGPAPCPCPC)-3') (nucleic acid) DNA (5'-D(TPCPTPAPGPGP(RDG)PTPCPCPTPAPGPGPAPCPCPC)-3') (nucleic acid)
Unique Ligands	1FZ, MG

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4R8U	Download File View File

S-SAD structure of DINB-DNA Complex

Kottur, J., Nair, D.T., Weinert, T., Oligeric, V., Wang, M.

(2015) Nat Methods 12: 131-133

Released	2015-01-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli K-12 synthetic construct
Macromolecule	DNA polymerase IV (protein) DNA (nucleic acid)
Unique Ligands	1FZ, MG

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4YN4	Download File View File

Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable dTTP WITH MANGANESE IN THE ACTIVE SITE

Lee, S., Koag, M.-C.

(2018) Biochemistry

Released	2016-03-09
Method	X-RAY DIFFRACTION 2.243 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA 10-mer (up-primer) (nucleic acid) DNA 16-mer (template) (nucleic acid) DNA 5-mer (dn-primer) (nucleic acid)
Unique Ligands	1FZ, MN, NA

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4Z6D	Download File View File

Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP

Koag, M.-C., Lee, S.

(2018) Biochem J 475: 571-585

Released	2016-04-13
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCPGPTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MG, NA

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4Z6E	Download File View File

Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP and MANGANESE

Koag, M.-C., Lee, S.

(2018) Biochem J 475: 571-585

Released	2016-04-13
Method	X-RAY DIFFRACTION 2.752 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCPGPTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MN, NA

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4Z6F	Download File View File

Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP and MANGANESE

Koag, M.-C., Lee, S.

(2018) Biochem J 475: 571-585

Released	2016-04-13
Method	X-RAY DIFFRACTION 2.444 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCP(6OG)PTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MN, NA

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5DGA	Download File View File

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA EXTENDING AN 1,N6-ETHENODEOXYADENOSINE : dT PAIR BY INSERTING dTMPNPP OPPOSITE TEMPLATE dA

Patra, A., Egli, M.

(2016) J Biol Chem 291: 14134-14145

Released	2016-06-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTPAP(EDA)PTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, MG

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5DGB	Download File View File

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA EXTENDING AN 1,N6-ETHENODEOXYADENOSINE : dA PAIR BY INSERTING dTMPNPP OPPOSITE TEMPLATE dA

Patra, A., Egli, M.

(2016) J Biol Chem 291: 14134-14145

Released	2016-06-08
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPA)-3') (nucleic acid) DNA (5'-D(CPAPTPAP(EDA)PTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, GOL, MG

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5L1J	Download File View File

Crystal Structure of Human DNA Polymerase Eta Inserting dTMPNPP Opposite O6-Methyl-2'-deoxyguanosine

Patra, A., Egli, M.

(2016) J Biol Chem 291: 24304-24313

Released	2016-10-05
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(6OG)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, GOL, MG

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6E3V	Download File View File

Structure of human DNA polymerase beta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP

Koag, M.-C., Lee, S.

(2019) J Am Chem Soc 141: 4584-4596

Released	2019-04-03
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCP(A38) PTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MG, NA

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6M7O	Download File View File

Human DNA polymerase eta ternary complex with Mn2+ and dTMPNPP oppositing cdA

Weng, P., Gao, Y., Yang, W.

(2018) Proc Natl Acad Sci U S A 115: 10660-10665

Released	2018-09-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APTP(02I)PCPTPCPAPCPAPCPT)-3') (nucleic acid) DNA (5'-D(PAPGPTPGPTPGPAPG(1FZ))-3') (nucleic acid)
Unique Ligands	1FZ, MN

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6M7U	Download File View File

Human DNA polymerase eta in a non-productive ternary complex with Mg2+ and dTMPNPP oppositing cdA

Weng, P., Gao, Y., Yang, W.

(2018) Proc Natl Acad Sci U S A 115: 10660-10665

Released	2018-09-12
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPTPGPTPGPAPG)-3') (nucleic acid) DNA (5'-D(APTP(02I)PCPTPCPAPCPAPCP*T)-3') (nucleic acid)
Unique Ligands	1FZ, CL, MG, NI

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6PL7	Download File View File

Structure of human DNA polymerase eta complexed with A in the template base paired with incoming non-hydrolyzable TTP

Koag, M.C., Lee, S.

To be published

Released	2020-07-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTPAPAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, GOL, MG

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6PL8	Download File View File

Structure of human DNA polymerase eta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP

Koag, M.C., Lee, S.

To be published

Released	2020-07-01
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase eta (protein) DNA (5'-D(APGPCPGPTPCPAPT)-3') (nucleic acid) DNA (5'-D(CPAPTP(A38)PAPTPGPAPCPGPCPT)-3') (nucleic acid)
Unique Ligands	1FZ, GOL, MG

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6TXE	Download File View File

Crystal structure of tetrameric human wt-SAMHD1 (residues 109-626) with GTP, dATP, dTMPNPP and Mg

Morris, E.R., Kunzelmann, S., Caswell, S.J., Arnold, L.H., Purkiss, A.G., Kelly, G., Taylor, I.A.

(2020) Nat Commun 11: 3165-3165

Released	2020-06-24
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Homo sapiens
Macromolecule	Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (protein)
Unique Ligands	1FZ, DTP, FE, GTP, MG, SO4

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6VGM	Download File View File

Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dTTP*

Jung, H., Lee, S.

(2020) Biochem J 477: 2859-2871

Released	2021-01-06
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Homo sapiens Saccharolobus solfataricus
Macromolecule	DNA polymerase IV (protein) DNA (5'-D(GPGPGPGPGPAPAPGPGPAPTPTPC)-3') (nucleic acid) DNA (5'-D(TPCPAPTP(A38)PGPAPAPTPCPCPTPTPCPCPCPCP*C)-3') (nucleic acid)
Unique Ligands	1FZ, MG

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7MZ1	Download File View File

Structure of human DNA polymerase beta complexed with dzA in the template base paired with incoming non-hydrolyzable TTP

Koag, M.-C., Lee, S.

To be published

Released	2022-05-25
Method	X-RAY DIFFRACTION 2.175 Å
Organisms	Homo sapiens
Macromolecule	DNA polymerase beta (protein) DNA (5'-D(CPCPGPAPCP(4DU)PTPCPGPCPAPTPCPAPGPC)-3') (nucleic acid) DNA (5'-D(GPCPTPGPAPTPGPCPGPA)-3') (nucleic acid) DNA (5'-D(PGPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	1FZ, MG, NA