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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Common Name (Entity Source Organism) = "Bacteriophage T4"

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Search Summary

This query matches 139 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (139)

Scientific Name of Source Organism

	Tequatrovirus T4 (139)
	Homo sapiens (31)
	Severe acute respiratory syndrome coronavirus 2 (23)
	Severe acute respiratory syndrome-related coronavirus (8)
	Mycolicibacterium smegmatis MC2 155 (5)
	synthetic construct (5)
	Saccharomyces cerevisiae (4)
	Human respiratory syncytial virus A2 (2)
	Geobacter metallireducens GS-15 (1)
	Rattus norvegicus (1)

More...

Taxonomy

	Duplodnaviria (139)
	Eukaryota (37)
	Riboviria (35)
	Bacteria (6)
	other sequences (5)

Experimental Method

	X-RAY DIFFRACTION (92)
	ELECTRON MICROSCOPY (46)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (139)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (22)
	1.5 - 2.0 (20)
	2.0 - 2.5 (16)
	2.5 - 3.0 (34)
	3.0 - 3.5 (21)
	3.5 - 4.0 (14)
	4.0 - 4.5 (5)
	> 4.5 (5)

Release Date

	2005 - 2009 (29)
	2010 - 2014 (10)
	2015 - 2019 (33)
	2020 - 2024 (61)
	2025 - 2029 (6)

Enzyme Classification Name

	Hydrolases (89)
	Ligases (3)
	Oxidoreductases (2)
	Transferases (3)

Membrane Protein Annotation

	PDBTM (24)
	mpstruc (20)
	OPM (18)
	MemProtMD (15)

Symmetry Type

	Asymmetric (116)
	Cyclic (22)
	Dihedral (2)
	Octahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (39)
	All alpha proteins (4)
	Alpha and beta proteins (a/b) (4)
	Artifacts (2)

AllSelected

1 to 25 of 139 Polymer Entities

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2KBL: Entity 1	Download File View File

NMR Structure of a Monomeric Folding Intermediate Reveals the Structural Basis for Rapid Assembly of an Evolutionary Optimized Trimerization Module

Habazettl, J., Reiner, A., Kiefhaber, T.

(2009) J Mol Biology 389: 103-114

Released	2009-04-28
Method	SOLUTION NMR
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Fibritin

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3A1M: Entity 1	Download File View File

A fusion protein of a beta helix region of gene product 5 and the foldon region of bacteriophage T4

Yokoi, N., Suzuki, A., Hikage, T., Koshiyama, T., Terauchi, M., Yutani, K., Kanamaru, S., Arisaka, F., Yamane, T., Watanabe, Y., Ueno, T.

(2010) Small 6: 1873-1879

Released	2010-04-21
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B, C, D, E
Organism	Tequatrovirus T4
Macromolecule	chimera of thrombin cleavage site, Tail-associated lysozyme, Fibritin

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3F8V: Entity 1	Download File View File

Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His

Mooers, B.H.M., Matthews, B.W.

(2009) Protein Sci 18: 863-870

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.08 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3F9L: Entity 1	Download File View File

Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His

Mooers, B.H.M., Matthews, B.W.

(2009) Protein Sci 18: 863-870

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.19 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3FA0: Entity 1	Download File View File

Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His

Mooers, B.H.M., Matthews, B.W.

(2009) Protein Sci 18: 863-870

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.09 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3FAD: Entity 1	Download File View File

Evaulaution at Atomic Resolution of the Role of Strain in Destabilizing the Temperature Sensitive T4 Lysozyme Mutant Arg96-->His

Mooers, B.H.M., Matthews, B.W.

(2009) Protein Sci 18: 863-870

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.2 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3FI5: Entity 1	Download File View File

Crystal Structure of T4 Lysozyme Mutant R96W

Mooers, B.H.M., Matthews, B.W.

(2009) Protein Sci 18: 871-880

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.53 Å
Chain IDs	A, B, C, D
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3FO8: Entity 1	Download File View File

Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR

Aksyuk, A.A., Leiman, P.G., Kurochkina, L.P., Shneider, M.M., Kostyuchenko, V.A., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) EMBO J 28: 821-829

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A [auth D]
Organism	Tequatrovirus T4
Macromolecule	Tail sheath protein Gp18

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3FOA: Entity 1	Download File View File

Crystal structure of the bacteriophage T4 tail sheath protein, deletion mutant gp18M

Aksyuk, A.A., Leiman, P.G., Kurochkina, L.P., Shneider, M.M., Kostyuchenko, V.A., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) EMBO J 28: 821-829

Released	2009-03-10
Method	X-RAY DIFFRACTION 3.5 Å
Chain IDs	A, B, C, D
Organism	Tequatrovirus T4
Macromolecule	Tail sheath protein Gp18

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3FOH: Entity 1	Download File View File

Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail

Aksyuk, A.A., Leiman, P.G., Kurochkina, L.P., Shneider, M.M., Kostyuchenko, V.A., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) EMBO J 28: 821-829

Released	2009-03-10
Method	ELECTRON MICROSCOPY 15 Å
Chain IDs	A, B, C, D, E
Organism	Tequatrovirus T4
Macromolecule	Tail sheath protein Gp18

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3FOI: Entity 1	Download File View File

Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail

Aksyuk, A.A., Leiman, P.G., Kurochkina, L.P., Shneider, M.M., Kostyuchenko, V.A., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) EMBO J 28: 821-829

Released	2009-03-10
Method	ELECTRON MICROSCOPY 16 Å
Chain IDs	A, B, C, D, E
Organism	Tequatrovirus T4
Macromolecule	Tail sheath protein Gp18

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3G3V: Entity 1	Download File View File

Crystal structure of spin labeled T4 Lysozyme (V131R1) at 291 K

Fleissner, M.R., Cascio, D., Hubbell, W.L.

(2009) Protein Sci 18: 893-908

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3G3W: Entity 1	Download File View File

Crystal structure of spin labeled T4 Lysozyme (T151R1) at 291 K

Fleissner, M.R., Cascio, D., Hubbell, W.L.

(2009) Protein Sci 18: 893-908

Released	2009-05-05
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3G3X: Entity 1	Download File View File

Crystal structure of spin labeled T4 Lysozyme (T151R1) at 100 K

Fleissner, M.R., Cascio, D., Hubbell, W.L.

(2009) Protein Sci 18: 893-908

Released	2009-05-05
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3H2T: Entity 1	Download File View File

Crystal structure of gene product 6, baseplate protein of bacteriophage T4

Aksyuk, A.A., Leiman, P.G., Shneider, M.M., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) Structure 17: 800-808

Released	2009-05-19
Method	X-RAY DIFFRACTION 3.2 Å
Chain IDs	A, B
Organism	Tequatrovirus T4
Macromolecule	Baseplate structural protein Gp6

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3H3W: Entity 1	Download File View File

Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate

Aksyuk, A.A., Leiman, P.G., Shneider, M.M., Mesyanzhinov, V.V., Rossmann, M.G.

(2009) Structure 17: 800-808

Released	2009-05-19
Method	ELECTRON MICROSCOPY 12 Å
Chain IDs	A, B, C, D, E More (12)
Organism	Tequatrovirus T4
Macromolecule	Baseplate structural protein Gp6

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3H7I: Entity 1	Download File View File

Structure of the metal-free D132N T4 RNase H

Tomanicek, S.J., Mueser, T.C.

To be published

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.502 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Ribonuclease H

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3H8J: Entity 1	Download File View File

Native T4 RNase H in the absence of divalent metal ions

Tomanicek, S.J., Mueser, T.C.

To be published

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Ribonuclease H

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3H8S: Entity 1	Download File View File

Structure of D19N T4 RNase H in the presence of divalent magnesium

Tomanicek, S.J., Mueser, T.C.

To be published

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.51 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Ribonuclease H

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3H8W: Entity 1	Download File View File

Structure of D132N T4 RNase H in the presence of divalent magnesium

Tomanicek, S.J., Mueser, T.C.

To be published

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.8 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Ribonuclease H

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3HT6: Entity 1	Download File View File

2-methylphenol in complex with T4 lysozyme L99A/M102Q

Boyce, S.E., Mobley, D.L., Rocklin, G.J., Graves, A.P., Dill, K.A., Shoichet, B.K.

(2009) J Mol Biology 394: 747-763

Released	2009-11-03
Method	X-RAY DIFFRACTION 1.59 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3HT7: Entity 1	Download File View File

2-ethylphenol in complex with T4 lysozyme L99A/M102Q

Boyce, S.E., Mobley, D.L., Rocklin, G.J., Graves, A.P., Dill, K.A., Shoichet, B.K.

(2009) J Mol Biology 394: 747-763

Released	2009-11-03
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3HT8: Entity 1	Download File View File

5-chloro-2-methylphenol in complex with T4 lysozyme L99A/M102Q

Boyce, S.E., Mobley, D.L., Rocklin, G.J., Graves, A.P., Dill, K.A., Shoichet, B.K.

(2009) J Mol Biology 394: 747-763

Released	2009-11-03
Method	X-RAY DIFFRACTION 1.6 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3HT9: Entity 1	Download File View File

2-methoxyphenol in complex with T4 lysozyme L99A/M102Q

Boyce, S.E., Mobley, D.L., Rocklin, G.J., Graves, A.P., Dill, K.A., Shoichet, B.K.

(2009) J Mol Biology 394: 747-763

Released	2009-11-03
Method	X-RAY DIFFRACTION 2.02 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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3HTB: Entity 1	Download File View File

2-propylphenol in complex with T4 lysozyme L99A/M102Q

Boyce, S.E., Mobley, D.L., Rocklin, G.J., Graves, A.P., Dill, K.A., Shoichet, B.K.

(2009) J Mol Biology 394: 747-763

Released	2009-11-03
Method	X-RAY DIFFRACTION 1.81 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

1 to 25 of 139 Polymer Entities

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