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232,059 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Common Name (Entity Source Organism) = "HCV"

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Search Summary

This query matches 165 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (165)

Scientific Name of Source Organism

	Hepatitis C virus isolate HC-J4 (43)
	Hepacivirus hominis (23)
	Hepatitis C virus (isolate BK) (23)
	Hepatitis C virus (isolate Con1) (18)
	Hepatitis C virus (isolate Japanese) (11)
	Hepatitis C virus JFH-1 (10)
	Hepatitis C virus (isolate 1) (8)
	Hepatitis C virus (isolate H) (6)
	Hepatitis C virus subtype 1b (6)
	Hepatitis C virus isolate HC-J1 (5)

More...

Taxonomy

Riboviria (165)

Experimental Method

	X-RAY DIFFRACTION (153)
	SOLUTION NMR (11)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (160)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (44)
	2.0 - 2.5 (69)
	2.5 - 3.0 (33)
	3.0 - 3.5 (3)
	3.5 - 4.0 (2)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (15)
	2010 - 2014 (112)
	2015 - 2019 (22)
	2020 - 2024 (13)

Enzyme Classification Name

	Transferases (109)
	Hydrolases (51)

Membrane Protein Annotation

	OPM (10)
	MemProtMD (4)
	PDBTM (1)
	mpstruc (1)

Symmetry Type

	Asymmetric (153)
	Cyclic (7)
	Helical (1)

SCOP Classification

	Multi-domain proteins (alpha and beta) (100)
	Artifacts (36)
	Alpha and beta proteins (a/b) (7)
	All beta proteins (13)

AllSelected

1 to 25 of 165 Polymer Entities

Page 1 of 7

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1DXW: Entity 1	Download File View File

structure of hetero complex of non structural protein (NS) of hepatitis C virus (HCV) and synthetic peptidic compound

Barbato, G., Cicero, D.O., Cordier, F., Narjes, F., Gerlach, B., Sambucini, S., Grzesiek, S., Matassa, V.G., Defrancesco, R., Bazzo, R.

(2000) EMBO J 19: 1195

Released	2001-01-12
Method	SOLUTION NMR
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	SERINE PROTEASE

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1GX5: Entity 1	Download File View File

Hepatitis C Virus RNA Polymerase in Complex with GTP and Manganese

Bressanelli, S., Rey, F.A.

(2002) J Virol 76: 3482

Released	2002-04-09
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Hepatitis C virus (isolate BK)
Macromolecule	RNA-DIRECTED RNA POLYMERASE

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1GX6: Entity 1	Download File View File

Hepatitis C Virus RNA polymerase in complex with UTP and manganese

Bressanelli, S., Rey, F.A.

(2002) J Virol 76: 3482

Released	2002-04-10
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Hepatitis C virus (isolate BK)
Macromolecule	RNA-DIRECTED RNA POLYMERASE

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2BRL: Entity 1	Download File View File

Crystal structure of Hepatitis C virus polymerase in complex with an allosteric inhibitor (compound 2)

Di Marco, S., Volpari, C., Carfi, A.

(2005) J Biol Chem 280: 29765

Released	2005-06-14
Method	X-RAY DIFFRACTION 2.4 Å
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	RNA-DIRECTED RNA POLYMERASE

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2KTZ: Entity 1	Download File View File

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

Paulsen, R.B., Seth, P.P., Swayze, E.E., Griffey, R.H., Skalicky, J.J., Cheatham III, T.E., Davis, D.R.

(2010) Proc Natl Acad Sci U S A 107: 7263-7268

Released	2010-04-28
Method	SOLUTION NMR
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	HCV IRES Domain IIa RNA

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2KU0: Entity 1	Download File View File

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

Paulsen, R.B., Seth, P.P., Swayze, E.E., Griffey, R.H., Skalicky, J.J., Cheatham III, T.E., Davis, D.R.

(2010) Proc Natl Acad Sci U S A 107: 7263-7268

Released	2010-04-28
Method	SOLUTION NMR
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	HCV IRES Domain IIa RNA

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2KWT: Entity 1	Download File View File

Solution structure of NS2 [27-59]

Montserret, R., Bartenschlager, R., Penin, F.

(2010) PLoS Pathog 6: e1001233-e1001233

Released	2011-03-02
Method	SOLUTION NMR
Chain ID	A
Organism	Hepatitis C virus (isolate Con1)
Macromolecule	Protease NS2-3

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2KWZ: Entity 1	Download File View File

Solution structure of NS2 [60-99]

Montserret, R., Bartenschlager, R., Penin, F.

(2010) PLoS Pathog 6: e1001233-e1001233

Released	2011-03-02
Method	SOLUTION NMR
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	Protease NS2-3

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2KZQ: Entity 1	Download File View File

s34r Structure

Montserret, R., Dubuisson, J., Penin, F.

(2011) J Virol 85: 1777-1792

Released	2011-03-02
Method	SOLUTION NMR
Chain ID	A
Organism	Hepatitis C virus JFH-1
Macromolecule	Envelope glycoprotein E2 peptide

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2LIF: Entity 1	Download File View File

Solution Structure of KKGF

Montserret, R., Penin, F.

(2012) J Virol 86: 7818-7828

Released	2012-07-11
Method	SOLUTION NMR
Chain ID	A
Organism	Hepatitis C virus JFH-1
Macromolecule	Core protein p21

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2LVG: Entity 1	Download File View File

NMR structure of HCV Non-structural protein AB, NS4B(1-40)

Montserret, R., Penin, F.

(2014) PLoS Pathog 10: e1004501-e1004501

Released	2013-06-19
Method	SOLUTION NMR
Chain ID	A
Organism	Hepatitis C virus JFH-1
Macromolecule	Non-structural protein 4B

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2M6X: Entity 1	Download File View File

Structure of the p7 channel of Hepatitis C virus, genotype 5a

OuYang, B., Chou, J.J.

(2013) Nature 498: 521-525

Released	2013-06-12
Method	SOLUTION NMR
Chain IDs	A, B, C, D, E
Organism	Hepatitis C virus (isolate EUH1480)
Macromolecule	p7

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2N1P: Entity 1	Download File View File

Structure of the C-terminal membrane domain of HCV NS5B protein

Montserret, R., Penin, F.

To be published

Released	2016-04-20
Method	SOLUTION NMR
Chain ID	A
Organism	Hepatitis C virus (isolate H)
Macromolecule	Non-structural protein 5B, NS5B

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2XHU: Entity 1	Download File View File

HCV-J4 NS5B Polymerase Orthorhombic Crystal Form

Harrus, D., Ahmed-El-Sayed, N., Simister, P.C., Miller, S., Triconnet, M., Hagedorn, C.H., Mahias, K., Rey, F.A., Astier-Gin, T., Bressanelli, S.

(2010) J Biol Chem 285: 32906

Released	2010-08-04
Method	X-RAY DIFFRACTION 2.287 Å
Chain IDs	A, B
Organism	Hepatitis C virus isolate HC-J4
Macromolecule	RNA-directed RNA polymerase

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2XHV: Entity 1	Download File View File

HCV-J4 NS5B Polymerase Point Mutant Orthorhombic Crystal Form

Harrus, D., Ahmed-El-Sayed, N., Simister, P.C., Miller, S., Triconnet, M., Hagedorn, C.H., Mahias, K., Rey, F.A., Astier-Gin, T., Bressanelli, S.

(2010) J Biol Chem 285: 32906

Released	2010-08-04
Method	X-RAY DIFFRACTION 1.9 Å
Chain IDs	A, B
Organism	Hepatitis C virus isolate HC-J4
Macromolecule	RNA-directed RNA polymerase

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2XHW: Entity 1	Download File View File

HCV-J4 NS5B Polymerase Trigonal Crystal Form

Harrus, D., Ahmed-El-Sayed, N., Simister, P.C., Miller, S., Triconnet, M., Hagedorn, C.H., Mahias, K., Rey, F.A., Astier-Gin, T., Bressanelli, S.

(2010) J Biol Chem 285: 32906-32918

Released	2010-08-04
Method	X-RAY DIFFRACTION 2.66 Å
Chain ID	A
Organism	Hepatitis C virus isolate HC-J4
Macromolecule	RNA-directed RNA polymerase

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2XI2: Entity 1	Download File View File

HCV-H77 NS5B Apo Polymerase

Harrus, D., Ahmed-El-Sayed, N., Simister, P.C., Miller, S., Triconnet, M., Hagedorn, C.H., Mahias, K., Rey, F.A., Astier-Gin, T., Bressanelli, S.

(2010) J Biol Chem 285: 32906

Released	2010-08-04
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	A, B, C
Organism	Hepatitis C virus (isolate H77)
Macromolecule	RNA-directed RNA polymerase

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2XXD: Entity 1	Download File View File

HCV-JFH1 NS5B polymerase structure at 1.9 angstrom

Caillet-Saguy, C., Bressanelli, S.

(2011) J Virol 85: 2565

Released	2011-01-12
Method	X-RAY DIFFRACTION 1.881 Å
Chain ID	A
Organism	Hepacivirus hominis
Macromolecule	RNA-DIRECTED RNA POLYMERASE

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3D28: Entity 1	Download File View File

Crystal structure of hcv ns5b polymerase with a novel benzisothiazole inhibitor

Han, Q., Showalter, R.E., Zhao, Q., Kissinger, C.R.

(2008) Bioorg Med Chem Lett 18: 4181-4185

Released	2009-05-19
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, B
Organism	Hepatitis C virus (isolate BK)
Macromolecule	RNA-directed RNA polymerase

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3E51: Entity 1	Download File View File

Crystal structure of HCV NS5B polymerase with a novel pyridazinone inhibitor

Han, Q., Showalter, R.E., Zhao, Q., Kissinger, C.R.

(2008) Bioorg Med Chem Lett 18: 5635-5639

Released	2009-08-18
Method	X-RAY DIFFRACTION 1.9 Å
Chain IDs	A, B
Organism	Hepatitis C virus (isolate BK)
Macromolecule	RNA-directed RNA polymerase

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3FQK: Entity 1	Download File View File

Hepatitis C virus polymerase NS5B (BK 1-570) with HCV-796 inhibitor

Harris, S.F., Wong, A.

(2009) J Biol Chem 284: 15517-15529

Released	2009-02-24
Method	X-RAY DIFFRACTION 2.2 Å
Chain IDs	A, B
Organism	Hepatitis C virus (isolate BK)
Macromolecule	RNA-directed RNA polymerase

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3FQL: Entity 1	Download File View File

Hepatitis C virus polymerase NS5B (CON1 1-570) with HCV-796 inhibitor

Harris, S.F., Wong, A.

(2009) J Biol Chem 284: 15517-15529

Released	2009-02-24
Method	X-RAY DIFFRACTION 1.8 Å
Chain ID	A
Organism	Hepatitis C virus (isolate Con1)
Macromolecule	RNA-directed RNA polymerase

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3FQM: Entity 1	Download File View File

Crystal structure of a novel dimeric form of HCV NS5A domain I protein

Love, R.A.

(2009) J Virol 83: 4395-4403

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.9 Å
Chain IDs	A, B
Organism	Hepatitis C virus (isolate Con1)
Macromolecule	Non-structural protein 5A

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3FQQ: Entity 1	Download File View File

Crystal structure of a novel dimeric form of HCV NS5A domain I protein

Love, R.A.

(2009) J Virol 83: 4395-4403

Released	2009-03-24
Method	X-RAY DIFFRACTION 2.2 Å
Chain IDs	A, B
Organism	Hepatitis C virus (isolate Con1)
Macromolecule	Non-structural protein 5A

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3GNV: Entity 1	Download File View File

HCV NS5B polymerase in complex with 1,5 benzodiazepine inhibitor 1b

De Bondt, H., Nyanguile, O.

(2009) J Med Chem 52: 4099-4102

Released	2009-10-20
Method	X-RAY DIFFRACTION 2.75 Å
Chain IDs	A, B
Organism	Hepatitis C virus isolate HC-J4
Macromolecule	RNA-directed RNA polymerase

1 to 25 of 165 Polymer Entities

Page 1 of 7

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