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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Scientific Name of the Source Organism = "Thermochaetoides thermophila DSM 1495"

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Search Summary

This query matches 2,346 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (2,346)

Scientific Name of Source Organism

	Thermochaetoides thermophila DSM 1495 (2,346)
	Thermochaetoides thermophila (3)
	Psychromonas sp. B3M02 (2)
	Saccharomyces cerevisiae S288C (2)
	Escherichia coli K-12 (1)
	Homo sapiens (1)
	Xenopus laevis (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (2,346)
	Bacteria (3)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (1,977)
	X-RAY DIFFRACTION (366)
	SOLUTION NMR (3)

Polymer Entity Type

	Protein (2,249)
	RNA (97)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (21)
	1.5 - 2.0 (55)
	2.0 - 2.5 (289)
	2.5 - 3.0 (1,056)
	3.0 - 3.5 (635)
	3.5 - 4.0 (153)
	4.0 - 4.5 (97)
	> 4.5 (36)

Release Date

	2010 - 2014 (31)
	2015 - 2019 (354)
	2020 - 2024 (1,845)
	2025 - 2029 (116)

Enzyme Classification Name

	Hydrolases (136)
	Transferases (64)
	Translocases (51)
	Oxidoreductases (11)
	Isomerases (5)
	Ligases (4)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (162)
	OPM (157)
	MemProtMD (127)
	mpstruc (21)

Symmetry Type

	Asymmetric (2,260)
	Cyclic (87)
	Dihedral (8)
	Icosahedral (3)
	Octahedral (2)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (9)
	Artifacts (9)
	All beta proteins (2)
	All alpha proteins (4)
	Alpha and beta proteins (a+b) (5)

AllSelected

1 to 25 of 2,346 Polymer Entities

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2MVF: Entity 1	Download File View File

Structural insight into an essential assembly factor network on the pre-ribosome

Lee, W., Bassler, J., Paternoga, H., Holdermann, I., Thomas, M., Granneman, S., Barrio-Garcia, C., Nyarko, A., Stier, G., Clark, S.A., Schraivogel, D., Kallas, M., Beckmann, R., Tollervey, D., Barbar, E., Sinning, I., Hurt, E.

(2014) J Cell Biol 207: 481-498

Released	2014-12-03
Method	SOLUTION NMR
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Uncharacterized protein

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3LPZ: Entity 1	Download File View File

Crystal structure of C. therm. Get4

Bozkurt, G., Wild, K., Sinning, I.

(2010) FEBS Lett 584: 1509-1514

Released	2010-03-16
Method	X-RAY DIFFRACTION 1.98 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Uncharacterized protein

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3WZS: Entity 1	Download File View File

Crystal structure of Trx3 domain of UGGT (detergent-bound form)

Zhu, T., Satoh, T., Kato, K.

(2014) Sci Rep 4: 7322-7322

Released	2014-12-03
Method	X-RAY DIFFRACTION 1.7 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	UDP-glucose-glycoprotein glucosyltransferase-like protein

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3WZT: Entity 1	Download File View File

Crystal structure of Trx3 domain of UGGT (detergent-unbound form)

Zhu, T., Satoh, T., Kato, K.

(2014) Sci Rep 4: 7322-7322

Released	2014-12-03
Method	X-RAY DIFFRACTION 3.4 Å
Chain IDs	A, B, C, D, E
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	UDP-glucose-glycoprotein glucosyltransferase-like protein

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4FGV: Entity 1	Download File View File

Crystal structure of free CRM1 (crystal form 1)

Monecke, T., Neumann, P., Dickmanns, A., Ficner, R.

(2013) Proc Natl Acad Sci U S A 110: 960-965

Released	2013-01-23
Method	X-RAY DIFFRACTION 2.941 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Chromosome region maintenance 1 (CRM1) or Exportin 1 (Xpo1)

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4GMN: Entity 1	Download File View File

Structural basis of Rpl5 recognition by Syo1

Bange, G., Sinning, I.

(2012) Science 338: 666-671

Released	2012-10-31
Method	X-RAY DIFFRACTION 2.95 Å
Chain ID	A [auth B]
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	60S ribosomal protein l5-like protein

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4GMN: Entity 2	Download File View File

Structural basis of Rpl5 recognition by Syo1

Bange, G., Sinning, I.

(2012) Science 338: 666-671

Released	2012-10-31
Method	X-RAY DIFFRACTION 2.95 Å
Chain ID	B [auth A]
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative uncharacterized protein

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4GMO: Entity 1	Download File View File

Crystal structure of Syo1

Bange, G., Sinning, I.

(2012) Science 338: 666-671

Released	2012-10-31
Method	X-RAY DIFFRACTION 2.1 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative uncharacterized protein

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4GMQ: Entity 1	Download File View File

Ribosome-binding domain of Zuo1

Kopp, J., Bange, G., Sinning, I.

(2013) Nat Struct Mol Biol 20: 23-28

Released	2012-12-05
Method	X-RAY DIFFRACTION 1.3 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative ribosome associated protein

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4GNI: Entity 1	Download File View File

Structure of the Ssz1 ATPase bound to ATP and Magnesium

Bange, G., Sinning, I.

(2013) Nat Struct Mol Biol 20: 23-28

Released	2012-12-05
Method	X-RAY DIFFRACTION 1.796 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative heat shock protein

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4GYG: Entity 1	Download File View File

Crystal structure of the Rio2 kinase from Chaetomium thermophilum

Ferreira-Cerca, S., Sagar, V., Schafer, T., Diop, M., Wesseling, A.M., Lu, H., Chai, E., Hurt, E., LaRonde-LeBlanc, N.

(2012) Nat Struct Mol Biol 19: 1316-1323

Released	2012-10-17
Method	X-RAY DIFFRACTION 2.482 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Rio2 kinase

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4GYI: Entity 1	Download File View File

Crystal structure of the Rio2 kinase-ADP/Mg2+-phosphoaspartate complex from Chaetomium thermophilum

Ferreira-Cerca, S., Sagar, V., Schafer, T., Diop, M., Wesseling, A.M., Lu, H., Chai, E., Hurt, E., LaRonde-LeBlanc, N.

(2012) Nat Struct Mol Biol 19: 1316-1323

Released	2012-10-17
Method	X-RAY DIFFRACTION 2.2 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Rio2 kinase

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4HZK: Entity 1	Download File View File

Crystal structure of free CRM1 (crystal form 2)

Monecke, T., Neumann, P., Dickmanns, A., Ficner, R.

(2013) Proc Natl Acad Sci U S A 110: 960-965

Released	2013-01-23
Method	X-RAY DIFFRACTION 3.1 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	CRM1 Nuclear transport receptor

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4IPA: Entity 1	Download File View File

Structure of a thermophilic Arx1

Bange, G., Sinning, I.

(2013) BMC Evol Biol 13: 7-7

Released	2013-01-30
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, B, C, D
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative curved DNA-binding protein

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4JC8: Entity 1	Download File View File

Crystal Structure of HOPS component Vps33 from Chaetomium thermophilum

Baker, R.W., Jeffrey, P.D., Hughson, F.M.

(2013) PLoS One 8: e67409-e67409

Released	2013-05-08
Method	X-RAY DIFFRACTION 2.6 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	HOPS component Vps33

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4KHA: Entity 1	Download File View File

Structural basis of histone H2A-H2B recognition by the essential chaperone FACT

Hondele, M., Halbach, F., Hassler, M., Ladurner, A.G.

(2013) Nature 499: 111-114

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.35 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495 Xenopus laevis
Macromolecule	Spt16M-Histone H2B 1.1 chimera

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4KHB: Entity 1	Download File View File

Structure of the Spt16D Pob3N heterodimer

Stuwe, T., Zhang, E., Ladurner, A.G.

(2013) Nature 499: 111-114

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.4 Å
Chain IDs	A, E [auth G], F [auth E], G [auth C]
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Uncharacterized protein SPT16D

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4KHB: Entity 2	Download File View File

Structure of the Spt16D Pob3N heterodimer

Stuwe, T., Zhang, E., Ladurner, A.G.

(2013) Nature 499: 111-114

Released	2013-05-29
Method	X-RAY DIFFRACTION 2.4 Å
Chain IDs	B [auth D], C [auth F], D [auth H], H [auth B]
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Uncharacterized protein POB3N

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4KHO: Entity 1	Download File View File

Structure of the FACT complex Subunit Spt16M

Stuwe, T., Hondele, M., Ladurner, A.G.

(2013) Nature 499: 111-114

Released	2013-05-29
Method	X-RAY DIFFRACTION 2 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Uncharacterized protein Spt16M

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4KMO: Entity 1	Download File View File

Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum

Baker, R.W., Jeffrey, P.D., Hughson, F.M.

(2013) PLoS One 8: e67409-e67409

Released	2013-06-26
Method	X-RAY DIFFRACTION 2.6 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Small conjugating protein ligase-like protein

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4KMO: Entity 2	Download File View File

Crystal Structure of the Vps33-Vps16 HOPS subcomplex from Chaetomium thermophilum

Baker, R.W., Jeffrey, P.D., Hughson, F.M.

(2013) PLoS One 8: e67409-e67409

Released	2013-06-26
Method	X-RAY DIFFRACTION 2.6 Å
Chain ID	B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Putative vacuolar protein sorting-associated protein

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4LJ0: Entity 1	Download File View File

Nab2 Zn fingers complexed with polyadenosine

Stewart, M., Kuhlmann, S.I., Valkov, E.

(2014) Nucleic Acids Res 42: 672-680

Released	2013-10-09
Method	X-RAY DIFFRACTION 2.15 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Nab2

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4N3G: Entity 1	Download File View File

Crystal structure of eukaryotic translation initiation factor eIF5B (870-1116) from Chaetomium thermophilum, domains III and IV

Kuhle, B., Ficner, R.

(2014) EMBO J 33: 1177-1191

Released	2014-07-09
Method	X-RAY DIFFRACTION 3.203 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Eukaryotic translation initiation factor 5B-like protein, eIF5B(870-C)

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4N3N: Entity 1	Download File View File

Crystal structure of eukaryotic translation initiation factor eIF5B (517-1116) from Chaetomium thermophilum, apo form

Kuhle, B., Ficner, R.

(2014) EMBO J 33: 1177-1191

Released	2014-07-09
Method	X-RAY DIFFRACTION 2.752 Å
Chain ID	A
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Eukaryotic translation initiation factor 5B-like protein, eIF5B(517-C)

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4NCL: Entity 1	Download File View File

Crystal structure of eukaryotic translation initiation factor eIF5B (517-970) from Chaetomium thermophilum in complex with GDP

Kuhle, B., Ficner, R.

(2014) EMBO J 33: 1177-1191

Released	2014-07-09
Method	X-RAY DIFFRACTION 2.115 Å
Chain IDs	A, B
Organism	Thermochaetoides thermophila DSM 1495
Macromolecule	Eukaryotic translation initiation factor 5B-like protein