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232,418 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "IDH2"

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Homo sapiens (7)
	Saccharomyces cerevisiae (3)
	Mus musculus (2)

Taxonomy

Eukaryota (12)

Experimental Method

X-RAY DIFFRACTION (12)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.5 - 2.0 (6)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)
	4.0 - 4.5 (1)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (1)
	2015 - 2019 (7)
	2020 - 2024 (1)

Enzyme Classification Name

Oxidoreductases (12)

Symmetry Type

Cyclic (12)

SCOP Classification

	Alpha and beta proteins (a/b) (9)
	Artifacts (5)

AllSelected

1 to 12 of 12 Structures

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3BLV	Download File View File

Yeast Isocitrate Dehydrogenase with Citrate Bound in the Regulatory Subunits

Taylor, A.B., Hu, G., Hart, P.J., McAlister-Henn, L.

(2008) J Biol Chem 283: 10872-10880

Released	2008-02-05
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Isocitrate dehydrogenase [NAD] subunit 1 (protein) Isocitrate dehydrogenase [NAD] subunit 2 (protein)
Unique Ligands	FLC

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3BLW	Download File View File

Yeast Isocitrate Dehydrogenase with Citrate and AMP Bound in the Regulatory Subunits

Taylor, A.B., Hu, G., Hart, P.J., McAlister-Henn, L.

(2008) J Biol Chem 283: 10872-10880

Released	2008-02-05
Method	X-RAY DIFFRACTION 4.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Isocitrate dehydrogenase [NAD] subunit 1 (protein) Isocitrate dehydrogenase [NAD] subunit 2 (protein)
Unique Ligands	AMP, FLC

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3BLX	Download File View File

Yeast Isocitrate Dehydrogenase (Apo Form)

Taylor, A.B., Hu, G., Hart, P.J., McAlister-Henn, L.

(2008) J Biol Chem 283: 10872-10880

Released	2008-02-05
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Isocitrate dehydrogenase [NAD] subunit 1 (protein) Isocitrate dehydrogenase [NAD] subunit 2 (protein)

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4JA8	Download File View File

Complex of Mitochondrial Isocitrate Dehydrogenase R140Q Mutant with AGI-6780 Inhibitor

Wei, W., Chen, L., Wu, M., Jiang, F., Travins, J., Qian, K., DeLaBarre, B.

(2013) Science 340: 622-626

Released	2013-04-10
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	1K9, CA, GOL, NDP

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5H3E	Download File View File

Crystal structure of mouse isocitrate dehydrogenases 2 K256Q mutant complexed with isocitrate

Xu, Y., Liu, L., Miyakawa, T., Nakamura, A., Tanokura, M.

(2017) Sci Rep 7: 9785-9785

Released	2017-08-30
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Mus musculus
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	ICT, MG

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5H3F	Download File View File

Crystal structure of mouse isocitrate dehydrogenases 2 complexed with isocitrate

Xu, Y., Liu, L., Miyakawa, T., Nakamura, A., Tanokura, M.

(2017) Sci Rep 7: 9785-9785

Released	2017-08-30
Method	X-RAY DIFFRACTION 3.29 Å
Organisms	Mus musculus
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	ICT, MG

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5I95	Download File View File

Crystal Structure of Human Mitochondrial Isocitrate Dehydrogenase R140Q Mutant Homodimer bound to NADPH and alpha-Ketoglutaric acid

Zhang, B., Jin, L., Wu, W., Jiang, F., DeLaBarre, B., Travins, J.A., Padyana, A.K.

(2017) Cancer Discov 7: 478-493

Released	2017-03-01
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	ACT, AKG, CA, GOL, NDP

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5I96	Download File View File

Crystal Structure of Human Mitochondrial Isocitrate Dehydrogenase (IDH2) R140Q Mutant Homodimer in Complex with AG-221 (Enasidenib) Inhibitor.

Wei, W., Zhang, B., Jin, L., Jiang, F., DeLaBarre, B., Travins, J.A., Padyana, A.K.

(2017) Cancer Discov 7: 478-493

Released	2017-03-08
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	69Q, ACT, CA, GOL, NA, NDP

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5SVN	Download File View File

Structure of IDH2 mutant R172K

Xie, X., Kulathila, R.

(2017) Structure 25: 506-513

Released	2017-02-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	NDP, PEG

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5SVO	Download File View File

Structure of IDH2 mutant R140Q

Xie, X., Kulathila, R.

(2017) Structure 25: 506-513

Released	2017-02-08
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	EPE, NAP

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6ADI	Download File View File

Crystal Structures of IDH2 R140Q in complex with AG-881

Ma, R., Yun, C.H.

(2018) Biochem Biophys Res Commun 503: 2912-2917

Released	2018-09-05
Method	X-RAY DIFFRACTION 1.969 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	9UO, NDP

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6VFZ	Download File View File

Crystal Structure of Human Mitochondrial Isocitrate Dehydrogenase (IDH2) R140Q Mutant Homodimer in Complex with NADPH and AG-881 (Vorasidenib) Inhibitor.

Padyana, A., Jin, L.

(2020) ACS Med Chem Lett 11: 101-107

Released	2020-02-05
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens
Macromolecule	Isocitrate dehydrogenase [NADP], mitochondrial (protein)
Unique Ligands	9UO, CA, NA, NDP

1 to 12 of 12 Structures

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