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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "PI4KB"

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

Homo sapiens (16)

Taxonomy

Eukaryota (16)

Experimental Method

	X-RAY DIFFRACTION (15)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (16)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (9)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (12)
	2020 - 2024 (4)

Enzyme Classification Name

	Transferases (16)
	Hydrolases (9)

Symmetry Type

Asymmetric (16)

SCOP Classification

Alpha and beta proteins (a/b) (1)

AllSelected

1 to 16 of 16 Structures

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Explore in 3D

2N73 \| pdb_00002n73	Download File View File

Solution structure of the ACBD3:PI4KB complex

Veverka, V., Hexnerova, R.

(2016) Sci Rep 6: 23641-23641

Released	2016-07-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Golgi resident protein GCP60 (protein) Phosphatidylinositol 4-kinase beta (protein)

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4WAE \| pdb_00004wae	Download File View File

Phosphatidylinositol 4-kinase III beta crystallized with ATP

Chalupska, D., Boura, E.

(2015) J Med Chem 58: 3767-3793

Released	2015-05-20
Method	X-RAY DIFFRACTION 3.318 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	ATP

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4WAG \| pdb_00004wag	Download File View File

Phosphatidylinositol 4-kinase III beta crystallized with MI103 inhibitor

Chalupska, D., Boura, E.

(2015) J Med Chem 58: 3767-3793

Released	2015-05-20
Method	X-RAY DIFFRACTION 3.407 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	3K7

Explore in 3D

5C46 \| pdb_00005c46	Download File View File

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta in complex with GTP gamma S loaded Rab11

Burke, J.E., Fowler, M.L.

(2016) Protein Sci 25: 826-839

Released	2016-01-20
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	GSP, MG, SO4

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5C4G \| pdb_00005c4g	Download File View File

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with the inhibitor BQR695 in complex with GDP loaded Rab11

Burke, J.E., Fowler, M.L.

(2016) Protein Sci 25: 826-839

Released	2016-01-20
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	BQR, GDP, MG, SO4

Explore in 3D

5EUQ \| pdb_00005euq	Download File View File

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with a potent and selective inhibitor in complex with GDP loaded Rab11

Burke, J.E., Fowler, M.L.

(2016) J Med Chem 59: 1830-1839

Released	2016-02-24
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5S8, GDP, SO4

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5FBL \| pdb_00005fbl	Download File View File

PI4KB in complex with Rab11 and the MI356 Inhibitor

Chalupska, D., Mejdrova, I., Nencka, R., Boura, E.

To be published

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.372 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5W9, GSP

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5FBQ \| pdb_00005fbq	Download File View File

PI4KB in complex with Rab11 and the MI358 Inhibitor

Chalupska, D., Mejdrova, I., Nencka, R., Boura, E.

To be published

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.789 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5W6, GDP

Explore in 3D

5FBR \| pdb_00005fbr	Download File View File

PI4KB in complex with Rab11 and the MI359 Inhibitor

Chalupska, D., Mejdrova, I., Nencka, R., Boura, E.

To be published

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.28 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5W7, GSP

Explore in 3D

5FBV \| pdb_00005fbv	Download File View File

PI4KB in complex with Rab11 and the MI364 Inhibitor

Chalupska, D., Mejdrova, I., Nencka, R., Boura, E.

To be published

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.285 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5W3, GSP

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5FBW \| pdb_00005fbw	Download File View File

PI4KB in complex with Rab11 and the MI369 Inhibitor

Chalupska, D., Mejdrova, I., Nencka, R., Boura, E.

To be published

Released	2016-12-28
Method	X-RAY DIFFRACTION 3.487 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	5W8, GSP

Explore in 3D

6GL3 \| pdb_00006gl3	Download File View File

Crystal structure of human Phosphatidylinositol 4-kinase III beta (PI4KIIIbeta) in complex with ligand 44

Lammens, A., Augustin, M., Steinbacher, S., Reuberson, J.

(2018) J Med Chem 61: 6705-6723

Released	2018-08-15
Method	X-RAY DIFFRACTION 2.77 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	EMW

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8Q6F \| pdb_00008q6f	Download File View File

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 4)

Somers, D.O.

(2023) RSC Chem Biol 4: 1111-1122

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.506 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	EDO, GOL, KHR, MG

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8Q6G \| pdb_00008q6g	Download File View File

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 8)

Somers, D.O.

(2023) RSC Chem Biol 4: 1111-1122

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.541 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	EDO, KIH, MG

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8Q6H \| pdb_00008q6h	Download File View File

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 11)

Somers, D.O.

(2023) RSC Chem Biol 4: 1111-1122

Released	2023-12-13
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Homo sapiens
Macromolecule	Phosphatidylinositol 4-kinase beta (protein)
Unique Ligands	EDO, KI7, MG

Explore in 3D

8VOF \| pdb_00008vof	Download File View File

GI targeted CpPI4K inhibitor

Knapp, M.S., Cuellar, C., Mamo, M.

(2024) Nat Microbiol 9: 2817-2835

Released	2024-09-04
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Isoform 2 of Phosphatidylinositol 4-kinase beta,Isoform 2 of Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta (protein) Ras-related protein Rab-11A (protein)
Unique Ligands	A1ADE, GDP, SO4

1 to 16 of 16 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2N73 | pdb_00002n73

Solution structure of the ACBD3:PI4KB complex

4WAE | pdb_00004wae

Phosphatidylinositol 4-kinase III beta crystallized with ATP

4WAG | pdb_00004wag

Phosphatidylinositol 4-kinase III beta crystallized with MI103 inhibitor

5C46 | pdb_00005c46

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta in complex with GTP gamma S loaded Rab11

5C4G | pdb_00005c4g

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with the inhibitor BQR695 in complex with GDP loaded Rab11

5EUQ | pdb_00005euq

Crystal structure of an engineered construct of phosphatidylinositol 4 kinase III beta with a potent and selective inhibitor in complex with GDP loaded Rab11

5FBL | pdb_00005fbl

PI4KB in complex with Rab11 and the MI356 Inhibitor

5FBQ | pdb_00005fbq

PI4KB in complex with Rab11 and the MI358 Inhibitor

5FBR | pdb_00005fbr

PI4KB in complex with Rab11 and the MI359 Inhibitor

5FBV | pdb_00005fbv

PI4KB in complex with Rab11 and the MI364 Inhibitor

5FBW | pdb_00005fbw

PI4KB in complex with Rab11 and the MI369 Inhibitor

6GL3 | pdb_00006gl3

Crystal structure of human Phosphatidylinositol 4-kinase III beta (PI4KIIIbeta) in complex with ligand 44

8Q6F | pdb_00008q6f

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 4)

8Q6G | pdb_00008q6g

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 8)

8Q6H | pdb_00008q6h

HUMAN PI4KIIIB IN COMPLEX WITH COVALENTLY BOUND INHIBITOR (COMPOUND 11)

8VOF | pdb_00008vof

GI targeted CpPI4K inhibitor

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2N73 | pdb_00002n73

4WAE | pdb_00004wae

4WAG | pdb_00004wag

5C46 | pdb_00005c46

5C4G | pdb_00005c4g

5EUQ | pdb_00005euq

5FBL | pdb_00005fbl

5FBQ | pdb_00005fbq

5FBR | pdb_00005fbr

5FBV | pdb_00005fbv

5FBW | pdb_00005fbw

6GL3 | pdb_00006gl3

8Q6F | pdb_00008q6f

8Q6G | pdb_00008q6g

8Q6H | pdb_00008q6h

8VOF | pdb_00008vof