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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Geobacter sulfurreducens"

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Search Summary

This query matches 102 Structures.

Refinements

Structure Determination Methodology

experimental (102)

Scientific Name of Source Organism

	Geobacter sulfurreducens (53)
	Geobacter sulfurreducens PCA (47)
	Escherichia coli 'BL21-Gold(DE3)pLysS AG (3)
	synthetic construct (3)
	Geobacter sulfurreducens KN400 (2)

Taxonomy

	Bacteria (102)
	other sequences (3)

Experimental Method

	X-RAY DIFFRACTION (75)
	ELECTRON MICROSCOPY (20)
	SOLUTION NMR (7)

Polymer Entity Type

	Protein (102)
	DNA (12)
	RNA (5)
	NA-hybrid (2)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (35)
	2.0 - 2.5 (22)
	2.5 - 3.0 (8)
	3.0 - 3.5 (12)
	3.5 - 4.0 (7)
	4.0 - 4.5 (3)
	> 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (28)
	2010 - 2014 (40)
	2015 - 2019 (9)
	2020 - 2024 (23)

Enzyme Classification Name

	Oxidoreductases (16)
	Hydrolases (5)
	Transferases (3)

Membrane Protein Annotation

	mpstruc (5)
	MemProtMD (4)
	OPM (3)
	PDBTM (4)

Symmetry Type

	Cyclic (61)
	Asymmetric (52)
	Helical (7)
	Dihedral (3)

SCOP Classification

	All alpha proteins (35)
	Alpha and beta proteins (a/b) (4)
	Artifacts (6)
	Alpha and beta proteins (a+b) (3)

AllSelected

1 to 25 of 102 Structures

Page 1 of 5

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1OS6 \| pdb_00001os6	Download File View File

Cytochrome c7 (PpcA) from Geobacter sulfurreducens

Pokkuluri, P.R., Londer, Y.Y., Duke, N.E.C., Long, W.C., Schiffer, M.

(2004) Biochemistry 43: 849-859

Released	2004-02-03
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Geobacter sulfurreducens
Macromolecule	PpcA (protein)
Unique Ligands	DXC, HEC, SO4

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1RWJ \| pdb_00001rwj	Download File View File

c7-type three-heme cytochrome domain

Pokkuluri, P.R., Londer, Y.Y., Duke, N.E.C., Erickson, J., Pessanha, M., Salgueiro, C.A., Schiffer, M.

(2004) Protein Sci 13: 1684-1692

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome c family protein (protein)
Unique Ligands	HEC

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2CZS \| pdb_00002czs	Download File View File

Crystal Structure Analysis of the Diheme c-type Cytochrome DHC2

Heitmann, D., Einsle, O.

(2005) Biochemistry 44: 12411-12419

Released	2005-10-18
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	cytochrome c, putative (protein)
Unique Ligands	HEM, NA, SO4

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2IA7 \| pdb_00002ia7	Download File View File

Crystal structure of putative tail lysozyme (NP_952040.1) from GEOBACTER SULFURREDUCENS at 1.44 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2006-09-19
Method	X-RAY DIFFRACTION 1.44 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Tail lysozyme, putative (protein)
Unique Ligands	EDO, NO3

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2L1T \| pdb_00002l1t	Download File View File

Solution Structure of the N-terminal Domain of NP_954075.1

Susac, L., Serrano, P., Geralt, M., Wuthrich, K., Joint Center for Structural Genomics (JCSG)

To be published

Released	2010-08-18
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens
Macromolecule	Uncharacterized protein (protein)

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2LDO \| pdb_00002ldo	Download File View File

Solution structure of triheme cytochrome PpcA from Geobacter sulfurreducens reveals the structural origin of the redox-Bohr effect

Morgado, L., Paixao, V.B., Bruix, M., Salgueiro, C.A.

(2012) Biochem J 441: 179-187

Released	2011-09-07
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome c3 (protein)
Unique Ligands	HEC

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2LZZ \| pdb_00002lzz	Download File View File

Solution structure of a mutant of the triheme cytochrome PpcA from Geobacter sulfurreducens sheds light on the role of the conserved aromatic residue F15

Dantas, J.M., Morgado, L., Turner, D.L., Salgueiro, C.A.

(2013) Biochim Biophys Acta 1827: 484-492

Released	2013-01-30
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens KN400
Macromolecule	Cytochrome c, 3 heme-binding sites (protein)
Unique Ligands	HEM

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2M7G \| pdb_00002m7g	Download File View File

Structure of the Type IVa Major Pilin from the Electrically Conductive Bacterial Nanowires of Geobacter sulfurreducens

Reardon, P.N., Mueller, K.T.

(2013) J Biological Chem 288: 29260-29266

Released	2013-08-28
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens KN400
Macromolecule	Geopilin domain 1 protein (protein)

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2MZ9 \| pdb_00002mz9	Download File View File

Solution structure of oxidized triheme cytochrome PpcA from Geobacter sulfurreducens

Morgado, L., Bruix, M., Pokkuluri, R., Salgueiro, C.A., Turner, D.L.

(2017) Biochem J 474: 231-246

Released	2016-02-10
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens
Macromolecule	PpcA (protein)
Unique Ligands	HEC

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2N91 \| pdb_00002n91	Download File View File

A key amino acid in the control of different functional behavior within the triheme cytochrome family from Geobacter sulfurreducens

Dantas, J.M., Simoes, T., Bruix, M., Salgueiro, C.A.

(2016) J Phys Chem B 120: 10221-10233

Released	2016-09-21
Method	SOLUTION NMR
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome C (protein)
Unique Ligands	HEM

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2OPL \| pdb_00002opl	Download File View File

Crystal structure of an osmc-like protein (gsu2788) from geobacter sulfurreducens at 1.50 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2007-02-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Hypothetical protein (protein)
Unique Ligands	ACT, NA, P6G, SO4

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2QYB \| pdb_00002qyb	Download File View File

Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA

Nocek, B., Duggan, E., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-08-28
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Membrane protein, putative (protein)

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2R78 \| pdb_00002r78	Download File View File

Crystal structure of a domain of the sensory box sensor histidine kinase/response regulator from Geobacter sulfurreducens

Zhang, R., Sather, A., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-09-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Sensor protein (protein)
Unique Ligands	ACT

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2RDC \| pdb_00002rdc	Download File View File

CRYSTAL STRUCTURE OF A PUTATIVE LIPID BINDING PROTEIN (GSU0061) FROM GEOBACTER SULFURREDUCENS PCA AT 1.80 A RESOLUTION

Joint Center for Structural Genomics (JCSG)

To be published

Released	2007-10-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Uncharacterized protein (protein)
Unique Ligands	CL, MPD, SO4

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2W31 \| pdb_00002w31	Download File View File

globin domain of Geobacter sulfurreducens globin-coupled sensor

Pesce, A., Thijs, L., Nardini, M., Desmet, F., Sisinni, L., Gourlay, L., Bolli, A., Coletta, M., Van Doorslaer, S., Wan, X., Alam, M., Ascenzi, P., Moens, L., Bolognesi, M., Dewilde, S.

(2009) J Mol Biology 386: 246

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Geobacter sulfurreducens
Macromolecule	GLOBIN (protein)
Unique Ligands	GOL, HEM

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3B42 \| pdb_00003b42	Download File View File

Periplasmic sensor domain of chemotaxis protein GSU0935

Pokkuluri, P.R., Schiffer, M.

(2008) J Mol Biology 377: 1498-1517

Released	2008-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Methyl-accepting chemotaxis protein, putative (protein)
Unique Ligands	HEM

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3B47 \| pdb_00003b47	Download File View File

Periplasmic sensor domain of chemotaxis protein GSU0582

Pokkuluri, P.R., Schiffer, M.

(2008) J Mol Biology 377: 1498-1517

Released	2008-04-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Methyl-accepting chemotaxis protein (protein)
Unique Ligands	HEM

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3BIJ \| pdb_00003bij	Download File View File

Crystal structure of protein GSU0716 from Geobacter sulfurreducens. Northeast Structural Genomics target GsR13

Forouhar, F., Neely, H., Su, M., Seetharaman, J., Benach, J., Conover, K., Fang, Y., Xiao, R., Owen, L.A., Maglaqui, M., Cunningham, K., Baran, M.C., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-12-11
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Uncharacterized protein GSU0716 (protein)

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3BXU \| pdb_00003bxu	Download File View File

PpcB, A Cytochrome c7 from Geobacter sulfurreducens

Pokkuluri, P.R., Schiffer, M.

(2008) Biochim Biophys Acta 1777: 1157-1165

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome c3 (protein)
Unique Ligands	HEM, SO4

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3C37 \| pdb_00003c37	Download File View File

X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A

Kuzin, A.P., Chen, Y., Seetharaman, J., Vorobiev, S.M., Forouhar, F., Wang, D., Mao, L., Maglaqui, M., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2008-02-12
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Peptidase, M48 family (protein)
Unique Ligands	PEG, ZN

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3C3P \| pdb_00003c3p	Download File View File

Crystal structure of a methyltransferase (NP_951602.1) from Geobacter sulfurreducens at 1.90 A resolution

Joint Center for Structural Genomics (JCSG)

To be published

Released	2008-02-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Geobacter sulfurreducens PCA
Macromolecule	Methyltransferase (protein)
Unique Ligands	CL, EDO, PEG

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3CU4 \| pdb_00003cu4	Download File View File

OmcF, Outer membrance cytochrome F from Geobacter sulfurreducens

Pokkuluri, P.R., Schiffer, M.

(2008) Proteins 74: 266-270

Released	2008-10-21
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome c family protein (protein)
Unique Ligands	HEM

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3DEW \| pdb_00003dew	Download File View File

The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.

Cuff, M.E., Bigelow, L., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-09-30
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Transcriptional regulator, TetR family (protein)
Unique Ligands	ACY, BME, CL, EDO

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3DP5 \| pdb_00003dp5	Download File View File

Crystal structure of Geobacter sulfurreducens OmcF with N-terminal Strep-tag II

Lukat, P., Hoffmann, M., Einsle, O.

(2008) Acta Crystallogr D Biol Crystallogr 64: 919-926

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Geobacter sulfurreducens
Macromolecule	Cytochrome c family protein (protein)
Unique Ligands	HEC, SO4