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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Opitutus terrae PB90-1"

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This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

Opitutus terrae PB90-1 (9)

Taxonomy

Bacteria (9)

Experimental Method

X-RAY DIFFRACTION (9)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (5)
	2.0 - 2.5 (1)

Release Date

	2015 - 2019 (8)
	2020 - 2024 (1)

Symmetry Type

Asymmetric (9)

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1 to 9 of 9 Structures

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6GRW \| pdb_00006grw	Download File View File

Glucuronoyl Esterase from Opitutus terrae (Au derivative)

Lo Leggio, L., Larsbrink, J., Meland Knudsen, R., Mazurkewich, S., Navarro Poulsen, J.C.

(2018) Biotechnol Biofuels 11: 213-213

Released	2018-08-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	Putative acetyl xylan esterase (protein)
Unique Ligands	AU, CA, EDO, MG, MPD

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6GS0 \| pdb_00006gs0	Download File View File

Native Glucuronoyl Esterase from Opitutus terrae

Lo Leggio, L., Larsbrink, J., Meland Knudsen, R., Mazurkewich, S., Navarro Poulsen, J.C.

(2018) Biotechnol Biofuels 11: 213-213

Released	2018-08-22
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	Putative acetyl xylan esterase (protein)
Unique Ligands	EDO, MG, PGE, SO4

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6SYR \| pdb_00006syr	Download File View File

The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with D-glucuronate

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	EDO, GCU, MG, NA

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6SYV \| pdb_00006syv	Download File View File

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-glucuronate

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	BDP, EDO, GCU, MG, PEG

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6SZ0 \| pdb_00006sz0	Download File View File

The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	EDO, GOL, MG, PEG, SO4

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6SZ4 \| pdb_00006sz4	Download File View File

The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	BDP, FMT

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6SZO \| pdb_00006szo	Download File View File

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-galacturonate

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	DMS, EDO, GTR, MG, PEG, PGE

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6T0E \| pdb_00006t0e	Download File View File

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with benzyl D-glucuronoate and D-glucuronate

Mazurkewich, S., Navarro Poulsen, J.C., Larsbrink, J., Lo Leggio, L.

(2019) J Biological Chem 294: 19978-19987

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	glucuronoyl esterase OtCE15A (protein)
Unique Ligands	CL, DMS, EDO, GCU, M55, MG, PEG, PG4, PGE, TMO

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7B7H \| pdb_00007b7h	Download File View File

The glucuronoyl esterase OtCE15A R268A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate

Mazurkewich, S., Larsbrink, J., Lo Leggio, L.

(2022) Nat Commun 13: 1449-1449

Released	2022-01-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Opitutus terrae PB90-1
Macromolecule	Putative acetyl xylan esterase (protein)
Unique Ligands	DMS, EDO, GCU, GLY, NA

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

6GRW | pdb_00006grw

Glucuronoyl Esterase from Opitutus terrae (Au derivative)

6GS0 | pdb_00006gs0

Native Glucuronoyl Esterase from Opitutus terrae

6SYR | pdb_00006syr

The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with D-glucuronate

6SYV | pdb_00006syv

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-glucuronate

6SZ0 | pdb_00006sz0

The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae

6SZ4 | pdb_00006sz4

The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate

6SZO | pdb_00006szo

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-galacturonate

6T0E | pdb_00006t0e

The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with benzyl D-glucuronoate and D-glucuronate

7B7H | pdb_00007b7h

The glucuronoyl esterase OtCE15A R268A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

6GRW | pdb_00006grw

6GS0 | pdb_00006gs0

6SYR | pdb_00006syr

6SYV | pdb_00006syv

6SZ0 | pdb_00006sz0

6SZ4 | pdb_00006sz4

6SZO | pdb_00006szo

6T0E | pdb_00006t0e

7B7H | pdb_00007b7h