RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Chem Comp Monomers (Polymer Entity Container Identifiers) = "CRQ"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 51 Structures.

Refinements

Structure Determination Methodology

experimental (51)

Scientific Name of Source Organism

	synthetic construct (14)
	Discosoma sp. (8)
	Anthomedusae sp. DC-2005 (6)
	Galaxea fascicularis (5)
	Montipora sp. 20 (5)
	Montipora efflorescens (4)
	Olindias (2)
	Acropora millepora (1)
	Alcyonium (1)
	Anemonia sulcata (1)

More...

Taxonomy

	Eukaryota (39)
	other sequences (14)

Experimental Method

	X-RAY DIFFRACTION (51)
	NEUTRON DIFFRACTION (1)

Polymer Entity Type

Protein (51)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (20)
	2.0 - 2.5 (20)
	2.5 - 3.0 (8)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (19)
	2010 - 2014 (8)
	2015 - 2019 (11)
	2020 - 2024 (9)

Symmetry Type

	Asymmetric (23)
	Dihedral (17)
	Cyclic (15)

SCOP Classification

	Alpha and beta proteins (a+b) (28)
	Artifacts (5)
	All beta proteins (1)

AllSelected

1 to 25 of 51 Structures

Page 1 of 3

Sort by

Explore in 3D

1G7K	Download File View File

CRYSTAL STRUCTURE OF DSRED, A RED FLUORESCENT PROTEIN FROM DISCOSOMA SP. RED

Yarbrough, D., Wachter, R.M., Kallio, K., Matz, M.V., Remington, S.J.

(2001) Proc Natl Acad Sci U S A 98: 462-467

Released	2000-12-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Discosoma sp.
Macromolecule	FLUORESCENT PROTEIN FP583 (protein)

Explore in 3D

1GGX	Download File View File

RED FLUORESCENT PROTEIN (FP583 OR DSRED(CLONTECH)) FROM DISCOSOMA SP.

Wall, M.A., Socolich, M.A., Ranganathan, R.

(2000) Nat Struct Biol 7: 1133-1138

Released	2000-12-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Discosoma sp.
Macromolecule	PROTEIN (FLUORESCENT PROTEIN FP583) (protein)

Explore in 3D

1MOU	Download File View File

Crystal structure of Coral pigment

Prescott, M., Ling, M., Beddoe, T., Oakley, A.J., Dove, S., Hoegh-Guldberg, O., Devenish, R.J., Rossjohn, J.

(2003) Structure 11: 275-284

Released	2003-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Montipora efflorescens
Macromolecule	GFP-like non-fluorescent chromoprotein (protein)
Unique Ligands	IOD

Explore in 3D

1MOV	Download File View File

Crystal structure of Coral protein mutant

Prescott, M., Ling, M., Beddoe, T., Oakley, A.J., Dove, S., Hoegh-Guldberg, O., Devenish, R.J., Rossjohn, J.

(2003) Structure 11: 275-284

Released	2003-04-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Montipora efflorescens
Macromolecule	GFP-like non-fluorescent chromoprotein (protein)
Unique Ligands	IOD

Explore in 3D

1ZGO	Download File View File

High Resolution Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed)

Tubbs, J.L., Tainer, J.A., Getzoff, E.D.

(2005) Biochemistry 44: 9833-9840

Released	2005-08-02
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Discosoma sp.
Macromolecule	Red fluorescent protein drFP583 (protein)

Explore in 3D

1ZGP	Download File View File

Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant K70M

Tubbs, J.L., Tainer, J.A., Getzoff, E.D.

(2005) Biochemistry 44: 9833-9840

Released	2005-08-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Discosoma sp.
Macromolecule	Red fluorescent protein drFP583 (protein)

Explore in 3D

2ARL	Download File View File

The 2.0 angstroms crystal structure of a pocilloporin at pH 3.5: the structural basis for the linkage between color transition and halide binding

Wilmann, P.G., Battad, J., Beddoe, T., Olsen, S., Smith, S.C., Dove, S., Devenish, R.J., Rossjohn, J., Prescott, M.

(2006) Photochem Photobiol 82: 359-366

Released	2006-09-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Montipora efflorescens
Macromolecule	GFP-like non-fluorescent chromoprotein (protein)
Unique Ligands	ACY, CL, IOD

Explore in 3D

2C9I	Download File View File

Structure of the fluorescent protein asFP499 from Anemonia sulcata

Renzi, F., Nienhaus, K., Wiedenmann, J., Vallone, B., Nienhaus, G.U.

(2006) Biophys J 91: 4210

Released	2007-01-16
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Anemonia sulcata
Macromolecule	GREEN FLUORESCENT PROTEIN ASFP499 (protein)

Explore in 3D

2C9J	Download File View File

Structure of the fluorescent protein cmFP512 at 1.35A from Cerianthus membranaceus

Renzi, F., Nienhaus, K., Wiedenmann, J., Vallone, B., Nienhaus, G.U.

(2006) Biochemistry 45: 12492

Released	2006-10-30
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Cerianthus membranaceus
Macromolecule	GREEN FLUORESCENT PROTEIN FP512 (protein)

Explore in 3D

2H8Q	Download File View File

Crystal Structure of a Redshifted Mutant (K83M) of the Red Fluorescent Protein dRFP583/dsRed

Yarbrough, C.A., Remington, S.J.

(2006) Biochemistry 45: 9639-9647

Released	2006-08-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Discosoma sp.
Macromolecule	Red fluorescent protein drFP583 (protein)

Explore in 3D

2IB5	Download File View File

Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus

Chan, M.C.Y., Bosanac, I., Ikura, M.

(2006) J Biological Chem 281: 37813-37819

Released	2006-10-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Epiactis japonica
Macromolecule	Chromo protein (protein)
Unique Ligands	PO4

Explore in 3D

2P4M	Download File View File

High pH structure of Rtms5 H146S variant

Battad, J.M., Wilmann, P.G., Olsen, S., Byres, E., Smith, S.C., Dove, S.G., Turcic, K.N., Devenish, R.J., Rossjohn, J., Prescott, M.

(2007) J Mol Biology 368: 998-1010

Released	2007-04-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Montipora efflorescens
Macromolecule	GFP-like non-fluorescent chromoprotein (protein)
Unique Ligands	IOD

Explore in 3D

2VAD	Download File View File

Monomeric red fluorescent protein, DsRed.M1

Strongin, D.E., Bevis, B., Khuong, N., Downing, M.E., Strack, R.L., Sundaram, K., Glick, B.S., Keenan, R.J.

(2007) Protein Eng Des Sel 20: 525

Released	2007-11-06
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Discosoma sp.
Macromolecule	RED FLUORESCENT PROTEIN (protein)
Unique Ligands	CL, EDO, ZN

Explore in 3D

2VAE	Download File View File

Fast maturing red fluorescent protein, DsRed.T4

Strongin, D.E., Bevis, B., Khuong, N., Downing, M.E., Strack, R.L., Sundaram, K., Glick, B.S., Keenan, R.J.

(2007) Protein Eng Des Sel 20: 525

Released	2007-11-06
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Discosoma sp.
Macromolecule	RED FLUORESCENT PROTEIN (protein)
Unique Ligands	EDO

Explore in 3D

2WHS	Download File View File

Fluorescent Protein mKeima at pH 3.8

Violot, S., Carpentier, P., Blanchoin, L., Bourgeois, D.

(2009) J Am Chem Soc 131: 10356

Released	2009-08-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Montipora sp. 20
Macromolecule	LARGE STOKES SHIFT FLUORESCENT PROTEIN (protein)
Unique Ligands	SO4

Explore in 3D

2WHT	Download File View File

Fluorescent Protein mKeima at pH 5.6

Violot, S., Carpentier, P., Blanchoin, L., Bourgeois, D.

(2009) J Am Chem Soc 131: 10356

Released	2009-08-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Montipora sp. 20
Macromolecule	LARGE STOKES SHIFT FLUORESCENT PROTEIN (protein)

Explore in 3D

2WHU	Download File View File

Fluorescent Protein mKeima at pH 8.0

Violot, S., Carpentier, P., Blanchoin, L., Bourgeois, D.

(2009) J Am Chem Soc 131: 10356

Released	2009-08-11
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Montipora sp. 20
Macromolecule	LARGE STOKES SHIFT FLUORESCENT PROTEIN (protein)

Explore in 3D

2WIQ	Download File View File

Fluorescent protein KillerRed in the native state

Carpentier, P., Violot, S., Blanchoin, L., Bourgeois, D.

(2009) FEBS Lett 583: 2839

Released	2009-08-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Anthomedusae sp. DC-2005
Macromolecule	KILLERRED (protein)
Unique Ligands	NA, SO4

Explore in 3D

2WIS	Download File View File

Fluorescent protein KillerRed in the bleached state

Carpentier, P., Violot, S., Blanchoin, L., Bourgeois, D.

(2009) FEBS Lett 583: 2839

Released	2009-08-11
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Anthomedusae sp. DC-2005
Macromolecule	KILLERRED (protein)
Unique Ligands	NA

Explore in 3D

3A8S	Download File View File

Crystal structure analysis of the fluorescent protein KillerRed

Sakai, N., Kitago, Y., Takemoto, K., Matsuda, T., Nagai, T.

To be published

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Anthomedusae sp. DC-2005
Macromolecule	KillerRed (protein)

Explore in 3D

3ADF	Download File View File

Crystal structure of a monomeric green fluorescent protein, Azami-Green (mAG)

Ebisawa, T., Yamamura, A., Kameda, Y., Hayakawa, K., Nagata, K., Tanokura, M.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 485-489

Released	2010-05-19
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Galaxea fascicularis
Macromolecule	Monomeric Azami Green (protein)

Explore in 3D

3CGL	Download File View File

Crystal Structure and Raman Studies of dsFP483, a Cyan Fluorescent Protein from Discosoma striata

Malo, G.D.

(2008) J Mol Biology 378: 869-884

Released	2008-07-01
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Discosoma striata
Macromolecule	GFP-like fluorescent chromoprotein dsFP483 (protein)
Unique Ligands	NA

Explore in 3D

3GB3	Download File View File

X-ray structure of genetically encoded photosensitizer KillerRed in native form

Pletnev, S., Pletneva, N.V., Pletnev, V.Z.

(2009) J Biological Chem 284: 32028-32039

Released	2009-09-08
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Anthomedusae sp. DC-2005
Macromolecule	KillerRed (protein)
Unique Ligands	SO4

Explore in 3D

3GL4	Download File View File

X-ray structure of photobleached killerred

Pletnev, S., Pletneva, N.V., Pletnev, V.Z.

(2009) J Biological Chem 284: 32028-32039

Released	2009-09-08
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Anthomedusae sp. DC-2005
Macromolecule	KillerRed (protein)

Explore in 3D

3IR8	Download File View File

Red fluorescent protein mKeima at pH 7.0

Henderson, J.N., Osborn, M.F., Koon, N., Gepshtein, R., Huppert, D., Remington, S.J.

(2009) J Am Chem Soc 131: 13212-13213

Released	2009-09-08
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Montipora sp. 20
Macromolecule	Large stokes shift fluorescent protein (protein)

1 to 25 of 51 Structures

Page 1 of 3

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

All questions and comments will receive a response in a timely manner.

Use this form for questions about RCSB.org and RCSB PDB services.
Please attach a screenshot when reporting an issue, if possible.
To update/release your in-progress structure depositions:
access the OneDep Communication panel
For questions/corrections to specific PDB entries, including citation updates:
email deposit-help@mail.wwpdb.org

First Name

Last Name

Subject

Question, Comment, Feedback or Other

Attach File(s)
Use CTRL or Shift keys to select more than one file ( files max)

I agree to the Help Desk Privacy Policy

Optional: To help us learn more about our users, what is your:

Institution Type

Role

Main Research Interest

Thank you for providing your feedback! Someone will be in touch with you shortly. This window will automatically close in 5 seconds.

Apologies, our feedback server is currently unavailable and we are troubleshooting the issue. In the meantime, please copy and paste the below information into an email addressed to info@rcsb.org

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification