RCSB PDB: Search

1FG0	Download File View File

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Nissen, P., Hansen, J., Ban, N., Moore, P.B., Steitz, T.A.

(2000) Science 289: 920-930

Released	2000-08-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haloarcula marismortui
Macromolecule	23S RIBOSOMAL RNA (nucleic acid) 5'-R(CCGGCGGGCUGGUUCAAACCGGCCCGCCGGACC)-3'-5'-R(P-PUROMYCIN)-3' (nucleic acid)

1NJM	Download File View File

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM) and the antibiotic sparsomycin

Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.

(2003) Mol Cell 11: 91-102

Released	2003-02-11
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Deinococcus radiodurans
Macromolecule	50S ribosomal protein L16 (protein) GENERAL STRESS PROTEIN CTC (protein) 23S ribosomal RNA (nucleic acid) tRNA acceptor stem mimic (nucleic acid)
Unique Ligands	SPS

1NJO	Download File View File

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a short substrate analog ACCPuromycin (ACCP)

Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.

(2003) Mol Cell 11: 91-102

Released	2003-02-11
Method	X-RAY DIFFRACTION 3.7 Å
Organisms	Deinococcus radiodurans
Macromolecule	23S ribosomal RNA (nucleic acid) RNA ACC(Puromycin) (nucleic acid)

1NJP	Download File View File

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM)

Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Hansen, H.A., Yonath, A.

(2003) Mol Cell 11: 91-102

Released	2003-02-11
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Deinococcus radiodurans
Macromolecule	50S ribosomal protein L16 (protein) GENERAL STRESS PROTEIN CTC (protein) 23S ribosomal RNA (nucleic acid) tRNA acceptor stem mimic (nucleic acid)

1VQL	Download File View File

The structure of the transition state analogue "DCSN" bound to the large ribosomal subunit of haloarcula marismortui

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

1VQM	Download File View File

The structure of the transition state analogue "DAN" bound to the large ribosomal subunit of haloarcula marismortui

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

1VQN	Download File View File

The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui

(2005) Nature 438: 520-524

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 4
Unique Ligands	CD, CL, K, MG, NA, SR

1VQO	Download File View File

The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

1VQP	Download File View File

The structure of the transition state analogue "RAP" bound to the large ribosomal subunit of haloarcula marismortui

(2005) Mol Cell 20: 437-448

Released	2005-11-29
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

1VVJ	Download File View File

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.44000111574 Å
Organisms	Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 48 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

1VY6	Download File View File

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.

(2014) Nat Struct Mol Biol 21: 787-793

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 6
Unique Ligands	K, MG, SF4, ZN

Polikanov, Y.S., Steitz, T.A., Innis, C.A.

1VY7	Download File View File

Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.

(2014) Nat Struct Mol Biol 21: 787-793

Released	2014-08-20
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	K, MG, SF4, ZN

3CD6	Download File View File

Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin

Blaha, G., Gurel, G.

(2008) J Mol Biol 379: 505-519

Released	2008-05-20
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Haloarcula marismortui
Macromolecule	Unique protein chains: 29 Unique nucleic acid chains: 3
Unique Ligands	CD, CL, K, MG, NA, SR

4L47	Download File View File

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.22000098079 Å
Organisms	Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4L71	Download File View File

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.90000100875 Å
Organisms	Escherichia coli Thermus thermophilus HB27 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4LEL	Download File View File

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.90000024172 Å
Organisms	Escherichia coli K-12 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4LFZ	Download File View File

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.92000059074 Å
Organisms	Escherichia coli K-12 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	AMP, MG, ZN

4LNT	Download File View File

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 2.94000009954 Å
Organisms	Escherichia coli K-12 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4LSK	Download File View File

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.48000627319 Å
Organisms	Escherichia coli K-12 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4LT8	Download File View File

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-06
Method	X-RAY DIFFRACTION 3.14000177152 Å
Organisms	Escherichia coli K-12 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4P70	Download File View File

Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome

(2014) Proc Natl Acad Sci U S A 111: 12740-12745

Released	2014-08-13
Method	X-RAY DIFFRACTION 3.68 Å
Organisms	Escherichia coli Escherichia coli str. K-12 substr. MDS42 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4TUA	Download File View File

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

(2014) RNA 20: 1944-1954

Released	2015-05-13
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Escherichia coli str. K-12 substr. DH10B Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4TUB	Download File View File

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

(2014) RNA 20: 1944-1954

Released	2015-05-13
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Escherichia coli str. K-12 substr. MC4100 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, PAR, ZN

4TUC	Download File View File

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

(2014) RNA 20: 1944-1954

Released	2015-05-13
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Escherichia coli str. K-12 substr. MC4100 Thermus thermophilus HB8 synthetic construct
Macromolecule	Unique protein chains: 49 Unique nucleic acid chains: 7
Unique Ligands	MG, ZN

4TUD	Download File View File

Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome