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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: PubMed ID = 8638158

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Search Summary

This query matches 16 Structures.

Refinements

Structure Determination Methodology

experimental (16)

Scientific Name of Source Organism

	Homo sapiens (9)
	Bos taurus (4)
	Mus musculus (1)
	Trypanosoma congolense (1)
	unidentified (1)

Taxonomy

	Eukaryota (15)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (15)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (15)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (5)
	2.5 - 3.0 (7)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (4)
	2005 - 2009 (1)
	2010 - 2014 (1)
	2015 - 2019 (8)
	2020 - 2024 (2)

Enzyme Classification Name

	Oxidoreductases (4)
	Translocases (4)
	Transferases (3)

Membrane Protein Annotation

	MemProtMD (4)
	PDBTM (4)

Symmetry Type

	Asymmetric (12)
	Cyclic (4)

SCOP Classification

	Membrane and cell surface proteins and peptides (4)
	All alpha proteins (4)
	All beta proteins (4)
	Small proteins (4)

AllSelected

1 to 16 of 16 Structures

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1OCO	Download File View File

BOVINE HEART CYTOCHROME C OXIDASE IN CARBON MONOXIDE-BOUND STATE

Tsukihara, T., Yao, M.

(1998) Science 280: 1723-1729

Released	1999-07-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 13
Unique Ligands	CMO, CU, HEA, MG, NA, ZN

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1OCR	Download File View File

BOVINE HEART CYTOCHROME C OXIDASE IN THE FULLY REDUCED STATE

Tsukihara, T., Yao, M.

(1998) Science 280: 1723-1729

Released	1999-07-29
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 13
Unique Ligands	CU, HEA, MG, NA, ZN

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1OCZ	Download File View File

BOVINE HEART CYTOCHROME C OXIDASE IN AZIDE-BOUND STATE

Tsukihara, T., Yao, M.

(1998) Science 280: 1723-1729

Released	1999-07-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 13
Unique Ligands	AZI, CU, HEA, MG, NA, ZN

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2OCC	Download File View File

BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE

Tsukihara, T., Yao, M.

(1998) Science 280: 1723-1729

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus
Macromolecule	Unique protein chains: 13
Unique Ligands	CU, HEA, MG, NA, PER, ZN

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2RMQ	Download File View File

Solution structure of fully modified 4'-thioDNA with the sequence of d(CGCGAATTCGCG)

Matsugami, A., Ohyama, T., Inada, M., Katahira, M.

(2008) Nucleic Acids Res 36: 1805-1812

Released	2008-04-15
Method	SOLUTION NMR
Macromolecule	DNA (5'-D((C4S)P(S4G)P(C4S)P(S4G)P(S4A)P(S4A)P(T49)P(T49)P(C4S)P(S4G)P(C4S)P(S4G))-3') (nucleic acid)

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2Y44	Download File View File

Crystal structure of GARP from Trypanosoma congolense

Loveless, B.C., Mason, J.W., Sakurai, T., Inoue, N., Razavi, M., Pearson, T.W., Boulanger, M.J.

(2011) J Biological Chem 286: 20658

Released	2011-03-30
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Trypanosoma congolense
Macromolecule	GLUTAMIC ACID/ALANINE-RICH PROTEIN (protein)
Unique Ligands	GOL, IOD

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4WUA	Download File View File

Crystal structure of human SRPK1 complexed to an inhibitor SRPIN340

Hoshina, M., Ikura, T., Hosoya, T., Hagiwara, M., Ito, N.

(2015) Mol Pharmacol 88: 316-325

Released	2015-09-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	SRSF protein kinase 1, linker, SRSF protein kinase 1 (protein)
Unique Ligands	3UL, CIT

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5B5K	Download File View File

Crystal structure of Izumo1, the mammalian sperm ligand for egg Juno

Nishimura, K., Han, L., De Sanctis, D., Jovine, L.

(2016) Curr Biol 26: R661-R662

Released	2016-07-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Izumo sperm-egg fusion protein 1 (protein)
Unique Ligands	EPE, NAG

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5JK9	Download File View File

Crystal structure of human IZUMO1

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Izumo sperm-egg fusion protein 1 (protein)
Unique Ligands	NAG

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5JKA	Download File View File

Crystal structure of human JUNO (crystal form 1)

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Sperm-egg fusion protein Juno (protein)
Unique Ligands	CL
Unique branched monosaccharides	BMA, MAN, NAG

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5JKB	Download File View File

Crystal structure of human JUNO (crystal form 2)

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 3.23 Å
Organisms	Homo sapiens
Macromolecule	Sperm-egg fusion protein Juno (protein)
Unique Ligands	CL

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5JKC	Download File View File

Crystal structure of human IZUMO1-JUNO complex (crystal form 1)

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Izumo sperm-egg fusion protein 1 (protein) Sperm-egg fusion protein Juno (protein)
Unique Ligands	CL, NAG

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5JKD	Download File View File

Crystal structure of human IZUMO1-JUNO complex (crystal form 2)

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Izumo sperm-egg fusion protein 1 (protein) Sperm-egg fusion protein Juno (protein)
Unique Ligands	CL, NAG

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5JKE	Download File View File

Crystal structure of human IZUMO1-JUNO complex (crystal form 3)

Ohto, U., Ishida, H., Shimizu, T.

(2016) Nature 534: 566-569

Released	2016-06-22
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Homo sapiens
Macromolecule	Izumo sperm-egg fusion protein 1 (protein) Sperm-egg fusion protein Juno (protein)
Unique Ligands	CL, NAG, SO4

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7WMC	Download File View File

Crystal structure of macrocyclic peptide 1 bound to human Nicotinamide N-methyltransferase

Yoshida, S., Uehara, S., Kondo, N., Takahashi, Y., Yamamoto, S., Kameda, A., Kawagoe, S., Inoue, N., Yamada, M., Yoshimura, N., Tachibana, Y.

(2022) J Med Chem 65: 10655-10673

Released	2022-08-31
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens unidentified
Macromolecule	Nicotinamide N-methyltransferase (protein) Peptide1 (protein)

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7WMT	Download File View File

Crystal structure of small molecule 13 bound to human Nicotinamide N-methyltransferase

Yoshida, S., Uehara, S., Kondo, N., Takahashi, Y., Yamamoto, S., Kameda, A., Kawagoe, S., Inoue, N., Yamada, M., Yoshimura, N., Tachibana, Y.

(2022) J Med Chem 65: 10655-10673

Released	2022-08-31
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens
Macromolecule	Nicotinamide N-methyltransferase (protein)
Unique Ligands	1IV

1 to 16 of 16 Structures

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