2IMU | pdb_00002imu

NMR structure of pep46 from the infectious bursal disease virus (IBDV) in dodecylphosphocholin (DPC).

PDB DOI: https://doi.org/10.2210/pdb2IMU/pdb
BMRB: 15108

Classification: VIRAL PROTEIN
Organism(s): Avian infectious bursal disease virus
Mutation(s): No

Deposited: 2006-10-05 Released: 2007-06-05
Deposition Author(s): Galloux, M., Libersou, S., Morellet, N., Bouaziz, S., Ouldali, M., Da Costa, B., Lepault, J., Delmas, B.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 13
Selection Criteria: structures with acceptable covalent geometry,structures with the lowest energy

wwPDB Validation 3D Report Full Report

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This is version 1.4 of the entry. See complete history.

Literature

Cell entry of a dsRNA virus through pores induced by one of its structural peptides.

Galloux, M., Libersou, S., Morellet, N., Bouaziz, S., Ouldali, M., Da Costa, B., Lepault, J., Delmas, B.

To be published.

Macromolecule Content

Total Structure Weight: 4.88 kDa
Atom Count: 346
Modeled Residue Count: 46
Deposited Residue Count: 46
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Structural polyprotein (PP) p1	A	46	N/A	Mutation(s): 0
UniProt
Find proteins for P61825 (Avian infectious bursal disease virus) Explore P61825 Go to UniProtKB: P61825
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P61825
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 13
Selection Criteria: structures with acceptable covalent geometry,structures with the lowest energy

Structure Validation

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Entry History

Deposition Data

Released Date: 2007-06-05

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2007-06-05
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2022-03-09
Changes: Data collection, Database references, Derived calculations
Version 1.4: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.