2PHZ | pdb_00002phz

Crystal structure of Iron-uptake system-binding protein FeuA from Bacillus subtilis. Northeast Structural Genomics target SR580.

PDB DOI: https://doi.org/10.2210/pdb2PHZ/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Bacillus subtilis
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2007-04-12 Released: 2007-04-24
Deposition Author(s): Benach, J., Neely, H., Seetharaman, J., Chen, C.X., Cunningham, K., Ma, L.-C., Janjua, H., Xiao, R., Baran, M., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.15 Å
R-Value Free:
0.234 (Depositor), 0.250 (DCC)
R-Value Work:
0.200 (Depositor), 0.214 (DCC)
R-Value Observed:
0.200 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.6 of the entry. See complete history.

Literature

Crystal structure of Iron-uptake system-binding protein FeuA from Bacillus subtilis.

Benach, J., Neely, H., Seetharaman, J., Chen, C.X., Cunningham, K., Ma, L.-C., Janjua, H., Xiao, R., Baran, M., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published.

Macromolecule Content

Total Structure Weight: 35.17 kDa
Atom Count: 2,330
Modeled Residue Count: 277
Deposited Residue Count: 311
Unique protein chains: 1

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Iron-uptake system-binding protein	A	311	Bacillus subtilis	Mutation(s): 7 Gene Names: feuA, BSU01630
UniProt
Find proteins for P40409 (Bacillus subtilis (strain 168)) Explore P40409 Go to UniProtKB: P40409
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P40409
Sequence Annotations Expand
Reference Sequence

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.15 Å
R-Value Free: 0.234 (Depositor), 0.250 (DCC)
R-Value Work: 0.200 (Depositor), 0.214 (DCC)
R-Value Observed: 0.200 (Depositor)

Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.461	α = 90
b = 55.461	β = 90
c = 177.551	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
RESOLVE	phasing
CNS	refinement
PDB_EXTRACT	data extraction
ADSC	data collection
HKL-2000	data reduction
SnB	phasing

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2007-04-24

Deposition Author(s):

Northeast Structural Genomics Consortium (NESG)

Revision History (Full details and data files)

Version 1.0: 2007-04-24
Type: Initial release
Version 1.1: 2008-05-01
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2017-10-18
Changes: Refinement description
Version 1.4: 2017-10-25
Changes: Author supporting evidence
Version 1.5: 2018-01-24
Changes: Database references, Structure summary
Version 1.6: 2024-10-16
Changes: Data collection, Database references, Derived calculations, Structure summary