4DIP

Crystal structure of human Peptidyl-prolyl cis-trans isomerase FKBP14

PDB DOI: https://doi.org/10.2210/pdb4DIP/pdb

Classification: ISOMERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-01-31 Released: 2012-02-22
Deposition Author(s): Krojer, T., Kiyani, W., Goubin, S., Muniz, J.R.C., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., von Delft, F., Oppermann, U., Zschocke, J., Yue, W.W., Structural Genomics Consortium (SGC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.82 Å
R-Value Free: 0.231
R-Value Work: 0.203
R-Value Observed: 0.205

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of human Peptidyl-prolyl cis-trans isomerase FKBP14

Krojer, T., Kiyani, W., Goubin, S., Muniz, J.R.C., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., von Delft, F., Oppermann, U., Zschocke, J., Yue, W.W., Structural Genomics Consortium (SGC)

To be published.

Macromolecule Content

Total Structure Weight: 140.44 kDa
Atom Count: 10,301
Modelled Residue Count: 1,201
Deposited Residue Count: 1,250
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Peptidyl-prolyl cis-trans isomerase FKBP14	A, B, C, D, E A, B, C, D, E, F, G, H, I, J	125	Homo sapiens	Mutation(s): 0 Gene Names: FKBP14, FKBP22, UNQ322/PRO381 EC: 5.2.1.8
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NWM8 (Homo sapiens) Explore Q9NWM8 Go to UniProtKB: Q9NWM8
PHAROS: Q9NWM8 GTEx: ENSG00000106080
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9NWM8
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PO4 Query on PO4 Download Ideal Coordinates CCD File SDF format, chain L [auth G] MOL2 format, chain L [auth G] mmCIF format, chain L [auth G]	L [auth G]	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Interactions Focus chain L [auth G] Interactions & Density Focus chain L [auth G]
NA Query on NA Download Ideal Coordinates CCD File SDF format, chain K [auth B] MOL2 format, chain K [auth B] mmCIF format, chain K [auth B]	K [auth B]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N		Interactions Focus chain K [auth B] Interactions & Density Focus chain K [auth B]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.82 Å
R-Value Free: 0.231
R-Value Work: 0.203
R-Value Observed: 0.205
Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.12	α = 81.23
b = 64.06	β = 75.21
c = 80.81	γ = 73.38

Software Package:

Software Name	Purpose
GDA	data collection
PHASER	phasing
REFMAC	refinement
MOSFLM	data reduction
Aimless	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2012-02-22

Deposition Author(s):

Structural Genomics Consortium (SGC)

Revision History (Full details and data files)

Version 1.0: 2012-02-22
Type: Initial release
Version 1.1: 2024-11-20
Changes: Data collection, Database references, Derived calculations, Structure summary

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Help and Resources

4DIP

Crystal structure of human Peptidyl-prolyl cis-trans isomerase FKBP14

Crystal structure of human Peptidyl-prolyl cis-trans isomerase FKBP14

Entity ID: 1

UniProt & NIH Common Fund Data Resources

Entity Groups

Sequence Annotations

Expand

Experimental Data

Structure Validation

Deposition Data

Revision History (Full details and data files)