Identification of selective, brain penetrant Toxoplasma gondii dihydrofolate reductase inhibitors for the treatment of toxoplasmosis
Thomas, S.B., Hopper, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Bifunctional dihydrofolate reductase-thymidylate synthase | 566 | Toxoplasma gondii | Mutation(s): 0  EC: 1.5.1.3 (PDB Primary Data), 2.1.1.45 (PDB Primary Data) | ||
UniProt | |||||
Find proteins for Q07422 (Toxoplasma gondii) Explore Q07422  Go to UniProtKB:  Q07422 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q07422 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NDP Query on NDP | D [auth A], H [auth B] | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H30 N7 O17 P3 ACFIXJIJDZMPPO-NNYOXOHSSA-N | |||
CB3 Query on CB3 | E [auth A], I [auth B] | 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID C24 H23 N5 O6 LTKHPMDRMUCUEB-IBGZPJMESA-N | |||
BOJ Query on BOJ | F [auth A], J [auth B] | 5-(4-phenylpiperazin-1-yl)-6-propylpyrimidine-2,4-diamine C17 H24 N6 NVJSDHWZOFXFSJ-UHFFFAOYSA-N | |||
UMP Query on UMP | C [auth A], G [auth B] | 2'-DEOXYURIDINE 5'-MONOPHOSPHATE C9 H13 N2 O8 P JSRLJPSBLDHEIO-SHYZEUOFSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 53.437 | α = 90 |
b = 145.053 | β = 90 |
c = 174.503 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
Blu-Ice | data collection |
HKL-2000 | data extraction |
HKL-2000 | data processing |