Download Mendeley0.98 A three-dimensional structure of horse heart cytochrome C at 110K
Sugawara, Y., Endo, S.To be published.
6K9J
0.98 A three-dimensional structure of horse heart cytochrome C at 110K
- PDB DOI: https://doi.org/10.2210/pdb6K9J/pdb
- Classification: ELECTRON TRANSPORT
- Organism(s): Equus caballus
- Mutation(s): Yes
- Deposited: 2019-06-16 Released: 2020-06-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 0.98 Å
- R-Value Free: 0.153 (Depositor), 0.160 (DCC)
- R-Value Work: 0.131 (Depositor), 0.140 (DCC)
Starting Model: experimental
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This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cytochrome c | 105 | Equus caballus | Mutation(s): 1 |  | |
UniProt | |||||
Find proteins for P00004 (Equus caballus) Explore P00004 Go to UniProtKB: P00004 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00004 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEC Query on HEC | B [auth A] | HEME C C34 H34 Fe N4 O4 HXQIYSLZKNYNMH-LJNAALQVSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 0.98 Å
- R-Value Free: 0.153 (Depositor), 0.160 (DCC)
- R-Value Work: 0.131 (Depositor), 0.140 (DCC)
Space Group: P 43
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 56.887 | α = 90 |
| b = 56.887 | β = 90 |
| c = 42.487 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SHELXL | refinement |
| CrysalisPro | data reduction |
| CrysalisPro | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2020-06-17 Deposition Author(s): Sugawara, Y., Endo, S.
Revision History (Full details and data files)
- Version 1.0: 2020-06-17
Type: Initial release - Version 1.1: 2023-11-22
Changes: Data collection, Database references, Refinement description - Version 1.2: 2024-11-06
Changes: Structure summary
