A BAK fragment that binds mitochondrial lipids and releases cytochrome c
Dai, H., Liu, L.-K., Kaufmann, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Bcl-2 homologous antagonist/killer | 84 | Homo sapiens | Mutation(s): 0  Gene Names: BAK1, BAK, BCL2L7, CDN1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q16611 (Homo sapiens) Explore Q16611  Go to UniProtKB:  Q16611 | |||||
PHAROS:  Q16611 GTEx:  ENSG00000030110  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q16611 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EPE Query on EPE | H [auth A], I [auth A], K [auth C], M [auth E], N [auth E] | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID C8 H18 N2 O4 S JKMHFZQWWAIEOD-UHFFFAOYSA-N | |||
PEG Query on PEG | L [auth D], O [auth F] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
SO4 Query on SO4 | G [auth A], J [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 45.043 | α = 117.13 |
b = 55.039 | β = 107.97 |
c = 55.682 | γ = 97.55 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | R01 CA166741 |