Crystal structure of SARS-CoV-2 main protease (Mpro) in complex with the HCV NS3/4A inhibitor boceprevir
Zhang, L., Hilgenfeld, R.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
3C-like proteinase | A [auth AAA] | 306 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 0  Gene Names: rep, 1a-1b EC: 3.4.22.69 | |
UniProt | |||||
Find proteins for P0DTD1 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTD1  Go to UniProtKB:  P0DTD1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DTD1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
U5G (Subject of Investigation/LOI) Query on U5G | B [auth AAA] | boceprevir (bound form) C27 H47 N5 O5 FEBWCINGHXXUCV-GFLQDLJJSA-N | |||
CL Query on CL | C [auth AAA] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Entity ID: 2 | |||||
---|---|---|---|---|---|
ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_002382 (U5G) Query on PRD_002382 | B [auth AAA] | Boceprevir (bound form) | Peptide-like / Enzyme inhibitor |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 113.767 | α = 90 |
b = 53.37 | β = 101.833 |
c = 45.949 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
MOLREP | phasing |
SCALA | data scaling |
Funding Organization | Location | Grant Number |
---|---|---|
European Commission | European Union | SCORE |